RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 CYSRT1A8MQ03 144 aa3.37□□□□□ -1.87
HMGB1P30-201ENST00000492455 AP4M1O00189 453 aa3.37□□□□□ -1.87
HMGB1P30-201ENST00000492455 ZSCAN9O15535 394 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P30-201ENST00000492455 CCNT2O60583 730 aaKnown RBP3.37□□□□□ -1.87
HMGB1P30-201ENST00000492455 WDR47O94967 919 aa3.37□□□□□ -1.87
HMGB1P30-201ENST00000492455 MBPP02686 304 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P30-201ENST00000492455 ENGP17813 658 aa3.37□□□□□ -1.87
HMGB1P30-201ENST00000492455 DRD4P21917 467 aa3.37□□□□□ -1.87
HMGB1P30-201ENST00000492455 FPR3P25089 353 aa3.37□□□□□ -1.87
HMGB1P30-201ENST00000492455 CYP2C18P33260 490 aa3.37□□□□□ -1.87
HMGB1P30-201ENST00000492455 KCNJ12Q14500 433 aa3.37□□□□□ -1.87
HMGB1P30-201ENST00000492455 C4orf46Q504U0 113 aa3.37□□□□□ -1.87
HMGB1P30-201ENST00000492455 RNASE12Q5GAN4 147 aaKnown RBP3.37□□□□□ -1.87
HMGB1P30-201ENST00000492455 TMEM196Q5HYL7 178 aa3.37□□□□□ -1.87
HMGB1P30-201ENST00000492455 AWAT2Q6E213 333 aa3.37□□□□□ -1.87
HMGB1P30-201ENST00000492455 SUMO4Q6EEV6 95 aa3.37□□□□□ -1.87
HMGB1P30-201ENST00000492455 SULT6B1Q6IMI4 303 aa3.37□□□□□ -1.87
HMGB1P30-201ENST00000492455 ZNF551Q7Z340 670 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P30-201ENST00000492455 RASGRP3Q8IV61 690 aa3.37□□□□□ -1.87
HMGB1P30-201ENST00000492455 CLASRPQ8N2M8 674 aaKnown RBP3.37□□□□□ -1.87
HMGB1P30-201ENST00000492455 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.37□□□□□ -1.87
HMGB1P30-201ENST00000492455 RP9Q8TA86 221 aaKnown RBP3.37□□□□□ -1.87
HMGB1P30-201ENST00000492455 OTUD7AQ8TE49 926 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P30-201ENST00000492455 GRAMD1AQ96CP6 724 aa3.37□□□□□ -1.87
HMGB1P30-201ENST00000492455 KAZALD1Q96I82 304 aa3.37□□□□□ -1.87
HMGB1P30-201ENST00000492455 MACROD1Q9BQ69 325 aa3.37□□□□□ -1.87
HMGB1P30-201ENST00000492455 NUDT22Q9BRQ3 303 aa3.37□□□□□ -1.87
HMGB1P30-201ENST00000492455 POLR3GLQ9BT43 218 aa3.37□□□□□ -1.87
HMGB1P30-201ENST00000492455 DDX23Q9BUQ8 820 aaKnown RBP3.37□□□□□ -1.87
HMGB1P30-201ENST00000492455 MYLK2Q9H1R3 596 aa3.37□□□□□ -1.87
HMGB1P30-201ENST00000492455 PABPC3Q9H361 631 aaKnown RBP3.37□□□□□ -1.87
HMGB1P30-201ENST00000492455 PRDM8Q9NQV8 689 aa3.37□□□□□ -1.87
HMGB1P30-201ENST00000492455 HELLSQ9NRZ9 838 aa3.37□□□□□ -1.87
HMGB1P30-201ENST00000492455 SAGE1Q9NXZ1 904 aa3.37□□□□□ -1.87
HMGB1P30-201ENST00000492455 STEAP1Q9UHE8 339 aa3.37□□□□□ -1.87
HMGB1P30-201ENST00000492455 ADAM21Q9UKJ8 722 aa3.37□□□□□ -1.87
HMGB1P30-201ENST00000492455 ST3GAL5Q9UNP4 418 aa3.37□□□□□ -1.87
HMGB1P30-201ENST00000492455 KAT6AQ92794 2004 aa3.36□□□□□ -1.87
HMGB1P30-201ENST00000492455 LOC105369274A0A096LPK9 316 aa3.36□□□□□ -1.87
HMGB1P30-201ENST00000492455 LOC102723532A0A0G2JNH3 316 aa3.36□□□□□ -1.87
HMGB1P30-201ENST00000492455 hCG_1642624A0A1W2PR95 340 aa3.36□□□□□ -1.87
HMGB1P30-201ENST00000492455 M0QYT0 321 aa3.36□□□□□ -1.87
HMGB1P30-201ENST00000492455 M0R3H8 397 aa3.36□□□□□ -1.87
HMGB1P30-201ENST00000492455 FCHO1O14526 889 aa3.36□□□□□ -1.87
HMGB1P30-201ENST00000492455 CTIFO43310 598 aaKnown RBP3.36□□□□□ -1.87
HMGB1P30-201ENST00000492455 CA12O43570 354 aa3.36□□□□□ -1.87
HMGB1P30-201ENST00000492455 SNX2O60749 519 aa3.36□□□□□ -1.87
HMGB1P30-201ENST00000492455 RPP40O75818 363 aaKnown RBP3.36□□□□□ -1.87
HMGB1P30-201ENST00000492455 PDE8BO95263 885 aa3.36□□□□□ -1.87
HMGB1P30-201ENST00000492455 CYP21A2P08686 494 aa3.36□□□□□ -1.87
HMGB1P30-201ENST00000492455 EBLN1P0CF75 366 aa3.36□□□□□ -1.87
HMGB1P30-201ENST00000492455 SRGAP2BP0DMP2 458 aa3.36□□□□□ -1.87
HMGB1P30-201ENST00000492455 YY1P25490 414 aa3.36□□□□□ -1.87
HMGB1P30-201ENST00000492455 DIO1P49895 249 aa3.36□□□□□ -1.87
HMGB1P30-201ENST00000492455 MTHFSP49914 203 aa3.36□□□□□ -1.87
HMGB1P30-201ENST00000492455 TPTEP56180 551 aa3.36□□□□□ -1.87
HMGB1P30-201ENST00000492455 EIF4A1P60842 406 aaKnown RBP3.36□□□□□ -1.87
HMGB1P30-201ENST00000492455 CYP4F2P78329 520 aa3.36□□□□□ -1.87
HMGB1P30-201ENST00000492455 PDCD2Q16342 344 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P30-201ENST00000492455 BTBD16Q32M84 506 aa3.36□□□□□ -1.87
HMGB1P30-201ENST00000492455 KRTAP27-1Q3LI81 207 aa3.36□□□□□ -1.87
HMGB1P30-201ENST00000492455 MIDNQ504T8 468 aa3.36□□□□□ -1.87
HMGB1P30-201ENST00000492455 PARS2Q7L3T8 475 aaKnown RBP3.36□□□□□ -1.87
HMGB1P30-201ENST00000492455 WDR53Q7Z5U6 358 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P30-201ENST00000492455 GATAD2AQ86YP4 633 aa3.36□□□□□ -1.87
HMGB1P30-201ENST00000492455 SLC44A2Q8IWA5 706 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P30-201ENST00000492455 OR4N4Q8N0Y3 316 aa3.36□□□□□ -1.87
HMGB1P30-201ENST00000492455 FSTL5Q8N475 847 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P30-201ENST00000492455 LRRC71Q8N4P6 559 aa3.36□□□□□ -1.87
HMGB1P30-201ENST00000492455 LINC01465Q8N7H1 131 aa3.36□□□□□ -1.87
HMGB1P30-201ENST00000492455 MYRIPQ8NFW9 859 aa3.36□□□□□ -1.87
HMGB1P30-201ENST00000492455 SEMA6DQ8NFY4 1073 aa3.36□□□□□ -1.87
HMGB1P30-201ENST00000492455 ADAMTS15Q8TE58 950 aa3.36□□□□□ -1.87
HMGB1P30-201ENST00000492455 TRAPPC12Q8WVT3 735 aa3.36□□□□□ -1.87
HMGB1P30-201ENST00000492455 RILPL2Q969X0 211 aa3.36□□□□□ -1.87
HMGB1P30-201ENST00000492455 TBC1D20Q96BZ9 403 aa3.36□□□□□ -1.87
HMGB1P30-201ENST00000492455 REPS1Q96D71 796 aa3.36□□□□□ -1.87
HMGB1P30-201ENST00000492455 HMCESQ96FZ2 354 aa3.36□□□□□ -1.87
HMGB1P30-201ENST00000492455 PAAF1Q9BRP4 392 aa3.36□□□□□ -1.87
HMGB1P30-201ENST00000492455 ISCA1Q9BUE6 129 aa3.36□□□□□ -1.87
HMGB1P30-201ENST00000492455 MECRQ9BV79 373 aa3.36□□□□□ -1.87
HMGB1P30-201ENST00000492455 SAP30LQ9HAJ7 183 aa3.36□□□□□ -1.87
HMGB1P30-201ENST00000492455 ITM2CQ9NQX7 267 aa3.36□□□□□ -1.87
HMGB1P30-201ENST00000492455 RXFP3Q9NSD7 469 aa3.36□□□□□ -1.87
HMGB1P30-201ENST00000492455 DAPP1Q9UN19 280 aa3.36□□□□□ -1.87
HMGB1P30-201ENST00000492455 ADAMTS5Q9UNA0 930 aa3.36□□□□□ -1.87
HMGB1P30-201ENST00000492455 BTBD3Q9Y2F9 522 aa3.36□□□□□ -1.87
HMGB1P30-201ENST00000492455 DGKBQ9Y6T7 804 aa3.36□□□□□ -1.87
HMGB1P30-201ENST00000492455 PNMA6EA0A0J9YXQ4 647 aa3.35□□□□□ -1.87
HMGB1P30-201ENST00000492455 MYMKA6NI61 221 aa3.35□□□□□ -1.87
HMGB1P30-201ENST00000492455 B9A039 149 aa3.35□□□□□ -1.87
HMGB1P30-201ENST00000492455 PPEF2O14830 753 aa3.35□□□□□ -1.87
HMGB1P30-201ENST00000492455 CREB3O43889 395 aa3.35□□□□□ -1.87
HMGB1P30-201ENST00000492455 PRAMEF2O60811 474 aa3.35□□□□□ -1.87
HMGB1P30-201ENST00000492455 FAM155BO75949 473 aa3.35□□□□□ -1.87
HMGB1P30-201ENST00000492455 ACTL6BO94805 426 aa3.35□□□□□ -1.87
HMGB1P30-201ENST00000492455 CER1O95813 267 aa3.35□□□□□ -1.87
HMGB1P30-201ENST00000492455 FGAP02671 866 aa3.35□□□□□ -1.87
HMGB1P30-201ENST00000492455 PRKCBP05771 671 aa3.35□□□□□ -1.87
HMGB1P30-201ENST00000492455 ITGA2BP08514 1039 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms