RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 KCNA4P22459 653 aa17.29■□□□□ 0.36
PDLIM2-217ENST00000491330 ERCC5P28715 1186 aaPredicted RBP17.29■□□□□ 0.36
PDLIM2-217ENST00000491330 RGS7P49802 495 aa17.29■□□□□ 0.36
PDLIM2-217ENST00000491330 DAOAP59103 153 aa17.29■□□□□ 0.36
PDLIM2-217ENST00000491330 LMAN2Q12907 356 aa17.29■□□□□ 0.36
PDLIM2-217ENST00000491330 TRIP4Q15650 581 aaPredicted RBP17.29■□□□□ 0.36
PDLIM2-217ENST00000491330 MEA1Q16626 185 aa17.29■□□□□ 0.36
PDLIM2-217ENST00000491330 ADGRF1Q5T601 910 aa17.29■□□□□ 0.36
PDLIM2-217ENST00000491330 SLC35F5Q8WV83 523 aa17.29■□□□□ 0.36
PDLIM2-217ENST00000491330 PIGKQ92643 395 aa17.29■□□□□ 0.36
PDLIM2-217ENST00000491330 FAM149B1Q96BN6 582 aa17.29■□□□□ 0.36
PDLIM2-217ENST00000491330 SERPINB11Q96P15 392 aa17.29■□□□□ 0.36
PDLIM2-217ENST00000491330 MED15Q96RN5 788 aa17.29■□□□□ 0.36
PDLIM2-217ENST00000491330 CIPCQ9C0C6 399 aa17.29■□□□□ 0.36
PDLIM2-217ENST00000491330 SLC12A6Q9UHW9 1150 aa17.29■□□□□ 0.36
PDLIM2-217ENST00000491330 CEP83Q9Y592 693 aa17.29■□□□□ 0.36
PDLIM2-217ENST00000491330 HELZP42694 1942 aaKnown RBP17.29■□□□□ 0.36
PDLIM2-217ENST00000491330 GPR179Q6PRD1 2367 aa17.28■□□□□ 0.36
PDLIM2-217ENST00000491330 YJEFN3A6XGL0 299 aa17.28■□□□□ 0.36
PDLIM2-217ENST00000491330 E7ENQ6 273 aa17.28■□□□□ 0.36
PDLIM2-217ENST00000491330 LTFP02788 710 aa17.28■□□□□ 0.36
PDLIM2-217ENST00000491330 KLKB1P03952 638 aa17.28■□□□□ 0.36
PDLIM2-217ENST00000491330 TPM2P07951 284 aa17.28■□□□□ 0.36
PDLIM2-217ENST00000491330 NCAM1P13591 858 aa17.28■□□□□ 0.36
PDLIM2-217ENST00000491330 BRD2P25440 801 aaKnown RBP17.28■□□□□ 0.36
PDLIM2-217ENST00000491330 HOXD12P35452 270 aa17.28■□□□□ 0.36
PDLIM2-217ENST00000491330 WASP42768 502 aa17.28■□□□□ 0.36
PDLIM2-217ENST00000491330 ATXN3P54252 364 aaPredicted RBP17.28■□□□□ 0.36
PDLIM2-217ENST00000491330 RPL6Q02878 288 aaKnown RBP17.28■□□□□ 0.36
PDLIM2-217ENST00000491330 SF3A2Q15428 464 aaKnown RBP17.28■□□□□ 0.36
PDLIM2-217ENST00000491330 PLA2G2CQ5R387 149 aa17.28■□□□□ 0.36
PDLIM2-217ENST00000491330 SYCP2LQ5T4T6 812 aa17.28■□□□□ 0.36
PDLIM2-217ENST00000491330 LYSMD4Q5XG99 296 aa17.28■□□□□ 0.36
PDLIM2-217ENST00000491330 EGFLAMQ63HQ2 1017 aa17.28■□□□□ 0.36
PDLIM2-217ENST00000491330 UBR7Q8N806 425 aa17.28■□□□□ 0.36
PDLIM2-217ENST00000491330 OLIG1Q8TAK6 271 aa17.28■□□□□ 0.36
PDLIM2-217ENST00000491330 CEP76Q8TAP6 659 aa17.28■□□□□ 0.36
PDLIM2-217ENST00000491330 WFIKKN2Q8TEU8 576 aa17.28■□□□□ 0.36
PDLIM2-217ENST00000491330 IPO4Q8TEX9 1081 aaKnown RBP17.28■□□□□ 0.36
PDLIM2-217ENST00000491330 STK32AQ8WU08 396 aa17.28■□□□□ 0.36
PDLIM2-217ENST00000491330 MIS12Q9H081 205 aa17.28■□□□□ 0.36
PDLIM2-217ENST00000491330 LMBRD1Q9NUN5 540 aa17.28■□□□□ 0.36
PDLIM2-217ENST00000491330 SFMBT1Q9UHJ3 866 aa17.28■□□□□ 0.36
PDLIM2-217ENST00000491330 FBXO10Q9UK96 956 aa17.28■□□□□ 0.36
PDLIM2-217ENST00000491330 TULP2O00295 520 aa17.27■□□□□ 0.36
PDLIM2-217ENST00000491330 PES1O00541 588 aaKnown RBP17.27■□□□□ 0.36
PDLIM2-217ENST00000491330 THAP12O43422 761 aa17.27■□□□□ 0.36
PDLIM2-217ENST00000491330 ADAM23O75077 832 aa17.27■□□□□ 0.36
PDLIM2-217ENST00000491330 LETM1O95202 739 aaPredicted RBP17.27■□□□□ 0.36
PDLIM2-217ENST00000491330 MBD3O95983 291 aa17.27■□□□□ 0.36
PDLIM2-217ENST00000491330 ATP5BP06576 529 aaKnown RBP17.27■□□□□ 0.36
PDLIM2-217ENST00000491330 CISD3P0C7P0 127 aa17.27■□□□□ 0.36
PDLIM2-217ENST00000491330 ACADMP11310 421 aa17.27■□□□□ 0.36
PDLIM2-217ENST00000491330 GNA15P30679 374 aa17.27■□□□□ 0.36
PDLIM2-217ENST00000491330 HOXC13P31276 330 aa17.27■□□□□ 0.36
PDLIM2-217ENST00000491330 TBX4P57082 545 aa17.27■□□□□ 0.36
PDLIM2-217ENST00000491330 PTK2Q05397 1052 aa17.27■□□□□ 0.36
PDLIM2-217ENST00000491330 CCDC6Q16204 474 aa17.27■□□□□ 0.36
PDLIM2-217ENST00000491330 EXOC3L4Q17RC7 722 aa17.27■□□□□ 0.36
PDLIM2-217ENST00000491330 PKDCCQ504Y2 493 aa17.27■□□□□ 0.36
PDLIM2-217ENST00000491330 STPG1Q5TH74 334 aa17.27■□□□□ 0.36
PDLIM2-217ENST00000491330 PMF1Q6P1K2 205 aa17.27■□□□□ 0.36
PDLIM2-217ENST00000491330 LMO3Q8TAP4 145 aa17.27■□□□□ 0.36
PDLIM2-217ENST00000491330 RLN3Q8WXF3 142 aa17.27■□□□□ 0.36
PDLIM2-217ENST00000491330 TFAP2BQ92481 460 aa17.27■□□□□ 0.36
PDLIM2-217ENST00000491330 FOXJ1Q92949 421 aa17.27■□□□□ 0.36
PDLIM2-217ENST00000491330 GABRG3Q99928 467 aa17.27■□□□□ 0.36
PDLIM2-217ENST00000491330 PDCL3Q9H2J4 239 aa17.27■□□□□ 0.36
PDLIM2-217ENST00000491330 ELOVL2Q9NXB9 296 aa17.27■□□□□ 0.36
PDLIM2-217ENST00000491330 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.26■□□□□ 0.35
PDLIM2-217ENST00000491330 GTPBP10A4D1E9 387 aaKnown RBP17.26■□□□□ 0.35
PDLIM2-217ENST00000491330 APOEP02649 317 aa17.26■□□□□ 0.35
PDLIM2-217ENST00000491330 BPIFB4P59827 614 aa17.26■□□□□ 0.35
PDLIM2-217ENST00000491330 RING1Q06587 406 aa17.26■□□□□ 0.35
PDLIM2-217ENST00000491330 MESP2Q0VG99 397 aa17.26■□□□□ 0.35
PDLIM2-217ENST00000491330 SFSWAPQ12872 951 aaKnown RBP17.26■□□□□ 0.35
PDLIM2-217ENST00000491330 MTA1Q13330 715 aa17.26■□□□□ 0.35
PDLIM2-217ENST00000491330 PPM1JQ5JR12 505 aa17.26■□□□□ 0.35
PDLIM2-217ENST00000491330 MPP7Q5T2T1 576 aa17.26■□□□□ 0.35
PDLIM2-217ENST00000491330 FYB2Q5VWT5 728 aa17.26■□□□□ 0.35
PDLIM2-217ENST00000491330 KIAA1324Q6UXG2 1013 aaKnown RBP17.26■□□□□ 0.35
PDLIM2-217ENST00000491330 TOGARAM2Q6ZUX3 1019 aa17.26■□□□□ 0.35
PDLIM2-217ENST00000491330 SYT12Q8IV01 421 aa17.26■□□□□ 0.35
PDLIM2-217ENST00000491330 ARHGEF19Q8IW93 802 aa17.26■□□□□ 0.35
PDLIM2-217ENST00000491330 TMEFF1Q8IYR6 380 aa17.26■□□□□ 0.35
PDLIM2-217ENST00000491330 AZIN2Q96A70 460 aa17.26■□□□□ 0.35
PDLIM2-217ENST00000491330 EDEM2Q9BV94 578 aa17.26■□□□□ 0.35
PDLIM2-217ENST00000491330 THAP9Q9H5L6 903 aa17.26■□□□□ 0.35
PDLIM2-217ENST00000491330 ZDHHC4Q9NPG8 344 aa17.26■□□□□ 0.35
PDLIM2-217ENST00000491330 CACNA2D2Q9NY47 1150 aa17.26■□□□□ 0.35
PDLIM2-217ENST00000491330 STON1Q9Y6Q2 735 aa17.26■□□□□ 0.35
PDLIM2-217ENST00000491330 PRRT4C9JH25 899 aa17.25■□□□□ 0.35
PDLIM2-217ENST00000491330 RNF225M0QZC1 329 aaPredicted RBP17.25■□□□□ 0.35
PDLIM2-217ENST00000491330 TRIM24O15164 1050 aa17.25■□□□□ 0.35
PDLIM2-217ENST00000491330 GDF9O60383 454 aa17.25■□□□□ 0.35
PDLIM2-217ENST00000491330 GNSP15586 552 aa17.25■□□□□ 0.35
PDLIM2-217ENST00000491330 GABRG2P18507 467 aa17.25■□□□□ 0.35
PDLIM2-217ENST00000491330 OXTRP30559 389 aa17.25■□□□□ 0.35
PDLIM2-217ENST00000491330 KRT9P35527 623 aa17.25■□□□□ 0.35
PDLIM2-217ENST00000491330 MSANTD2Q6P1R3 559 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms