RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 CDH22Q9UJ99 828 aa19.38■□□□□ 0.69
MCF2L-230ENST00000491028 ARHGAP26Q9UNA1 814 aa19.38■□□□□ 0.69
MCF2L-230ENST00000491028 USP15Q9Y4E8 981 aaPredicted RBP19.38■□□□□ 0.69
MCF2L-230ENST00000491028 CPQQ9Y646 472 aa19.38■□□□□ 0.69
MCF2L-230ENST00000491028 SYNJ2BP-COX16A0A087WUM0 186 aa19.37■□□□□ 0.69
MCF2L-230ENST00000491028 H3BQ06 376 aaPredicted RBP19.37■□□□□ 0.69
MCF2L-230ENST00000491028 KCNA5P22460 613 aa19.37■□□□□ 0.69
MCF2L-230ENST00000491028 MIPP30301 263 aa19.37■□□□□ 0.69
MCF2L-230ENST00000491028 CCR1P32246 355 aa19.37■□□□□ 0.69
MCF2L-230ENST00000491028 ZNF569Q5MCW4 686 aa19.37■□□□□ 0.69
MCF2L-230ENST00000491028 LRRC38Q5VT99 294 aa19.37■□□□□ 0.69
MCF2L-230ENST00000491028 NUGGCQ68CJ6 796 aa19.37■□□□□ 0.69
MCF2L-230ENST00000491028 PEX26Q7Z412 305 aa19.37■□□□□ 0.69
MCF2L-230ENST00000491028 NT5DC3Q86UY8 548 aa19.37■□□□□ 0.69
MCF2L-230ENST00000491028 FAM131BQ86XD5 332 aa19.37■□□□□ 0.69
MCF2L-230ENST00000491028 PPM1EQ8WY54 764 aa19.37■□□□□ 0.69
MCF2L-230ENST00000491028 FGF13Q92913 245 aa19.37■□□□□ 0.69
MCF2L-230ENST00000491028 NTAN1Q96AB6 310 aa19.37■□□□□ 0.69
MCF2L-230ENST00000491028 ZFRQ96KR1 1074 aaKnown RBP19.37■□□□□ 0.69
MCF2L-230ENST00000491028 CYP2S1Q96SQ9 504 aa19.37■□□□□ 0.69
MCF2L-230ENST00000491028 GOLPH3Q9H4A6 298 aa19.37■□□□□ 0.69
MCF2L-230ENST00000491028 POMKQ9H5K3 350 aa19.37■□□□□ 0.69
MCF2L-230ENST00000491028 KIF9Q9HAQ2 790 aa19.37■□□□□ 0.69
MCF2L-230ENST00000491028 COX16Q9P0S2 106 aa19.37■□□□□ 0.69
MCF2L-230ENST00000491028 AMFRQ9UKV5 643 aa19.37■□□□□ 0.69
MCF2L-230ENST00000491028 CDH7Q9ULB5 785 aa19.37■□□□□ 0.69
MCF2L-230ENST00000491028 USP18Q9UMW8 372 aa19.37■□□□□ 0.69
MCF2L-230ENST00000491028 ZFP37Q9Y6Q3 630 aaPredicted RBP19.37■□□□□ 0.69
MCF2L-230ENST00000491028 MIF4GDA9UHW6 222 aaKnown RBP19.36■□□□□ 0.69
MCF2L-230ENST00000491028 PRPSAP2O60256 369 aa19.36■□□□□ 0.69
MCF2L-230ENST00000491028 APOEP02649 317 aa19.36■□□□□ 0.69
MCF2L-230ENST00000491028 TCF3P15923 654 aa19.36■□□□□ 0.69
MCF2L-230ENST00000491028 SSR1P43307 286 aaKnown RBP19.36■□□□□ 0.69
MCF2L-230ENST00000491028 ATXN1P54253 815 aaKnown RBP19.36■□□□□ 0.69
MCF2L-230ENST00000491028 SLC25A11Q02978 314 aaKnown RBP19.36■□□□□ 0.69
MCF2L-230ENST00000491028 ARL13BQ3SXY8 428 aa19.36■□□□□ 0.69
MCF2L-230ENST00000491028 RAB6CQ53S08 254 aa19.36■□□□□ 0.69
MCF2L-230ENST00000491028 SCYL2Q6P3W7 929 aa19.36■□□□□ 0.69
MCF2L-230ENST00000491028 POLNQ7Z5Q5 900 aa19.36■□□□□ 0.69
MCF2L-230ENST00000491028 UNC45BQ8IWX7 931 aa19.36■□□□□ 0.69
MCF2L-230ENST00000491028 RHOT1Q8IXI2 618 aa19.36■□□□□ 0.69
MCF2L-230ENST00000491028 RNF34Q969K3 372 aa19.36■□□□□ 0.69
MCF2L-230ENST00000491028 FCRL2Q96LA5 508 aaPredicted RBP19.36■□□□□ 0.69
MCF2L-230ENST00000491028 RAB6CQ9H0N0 254 aa19.36■□□□□ 0.69
MCF2L-230ENST00000491028 WDCPQ9H6R7 721 aa19.36■□□□□ 0.69
MCF2L-230ENST00000491028 TDP1Q9NUW8 608 aa19.36■□□□□ 0.69
MCF2L-230ENST00000491028 MBTPS2O43462 519 aa19.35■□□□□ 0.69
MCF2L-230ENST00000491028 PSTPIP1O43586 416 aa19.35■□□□□ 0.69
MCF2L-230ENST00000491028 KRT7P08729 469 aa19.35■□□□□ 0.69
MCF2L-230ENST00000491028 GNG11P61952 73 aa19.35■□□□□ 0.69
MCF2L-230ENST00000491028 SCAPQ12770 1279 aa19.35■□□□□ 0.69
MCF2L-230ENST00000491028 BOLA3Q53S33 107 aa19.35■□□□□ 0.69
MCF2L-230ENST00000491028 DAB2IPQ5VWQ8 1189 aa19.35■□□□□ 0.69
MCF2L-230ENST00000491028 CPNE8Q86YQ8 564 aa19.35■□□□□ 0.69
MCF2L-230ENST00000491028 PSTKQ8IV42 348 aaKnown RBP19.35■□□□□ 0.69
MCF2L-230ENST00000491028 SLC35F6Q8N357 371 aa19.35■□□□□ 0.69
MCF2L-230ENST00000491028 ATP6V0D2Q8N8Y2 350 aa19.35■□□□□ 0.69
MCF2L-230ENST00000491028 ZSCAN18Q8TBC5 510 aaPredicted RBP19.35■□□□□ 0.69
MCF2L-230ENST00000491028 TEKT4Q8WW24 435 aa19.35■□□□□ 0.69
MCF2L-230ENST00000491028 CD101Q93033 1021 aa19.35■□□□□ 0.69
MCF2L-230ENST00000491028 DCLK3Q9C098 648 aa19.35■□□□□ 0.69
MCF2L-230ENST00000491028 SMPD4Q9NXE4 827 aa19.35■□□□□ 0.69
MCF2L-230ENST00000491028 ARHGEF38Q9NXL2 777 aa19.35■□□□□ 0.69
MCF2L-230ENST00000491028 SLC12A6Q9UHW9 1150 aa19.35■□□□□ 0.69
MCF2L-230ENST00000491028 HYOU1Q9Y4L1 999 aa19.35■□□□□ 0.69
MCF2L-230ENST00000491028 CCDC66A2RUB6 948 aa19.34■□□□□ 0.69
MCF2L-230ENST00000491028 GRXCR2A6NFK2 248 aa19.34■□□□□ 0.69
MCF2L-230ENST00000491028 STC2O76061 302 aa19.34■□□□□ 0.69
MCF2L-230ENST00000491028 LATS1O95835 1130 aa19.34■□□□□ 0.69
MCF2L-230ENST00000491028 FTCDO95954 541 aa19.34■□□□□ 0.69
MCF2L-230ENST00000491028 CTNNA2P26232 953 aa19.34■□□□□ 0.69
MCF2L-230ENST00000491028 CTNNA1P35221 906 aaKnown RBP19.34■□□□□ 0.69
MCF2L-230ENST00000491028 HARS2P49590 506 aaKnown RBP19.34■□□□□ 0.69
MCF2L-230ENST00000491028 TAS2R40P59535 323 aa19.34■□□□□ 0.69
MCF2L-230ENST00000491028 USP4Q13107 963 aa19.34■□□□□ 0.69
MCF2L-230ENST00000491028 LEXMQ3ZCV2 418 aa19.34■□□□□ 0.69
MCF2L-230ENST00000491028 ZC3H12AQ5D1E8 599 aaKnown RBP19.34■□□□□ 0.69
MCF2L-230ENST00000491028 ACBD5Q5T8D3 534 aaPredicted RBP19.34■□□□□ 0.69
MCF2L-230ENST00000491028 MEI1Q5TIA1 1274 aa19.34■□□□□ 0.69
MCF2L-230ENST00000491028 NYAP1Q6ZVC0 841 aa19.34■□□□□ 0.69
MCF2L-230ENST00000491028 MAFAQ8NHW3 353 aaPredicted RBP19.34■□□□□ 0.69
MCF2L-230ENST00000491028 USP13Q92995 863 aaPredicted RBP19.34■□□□□ 0.69
MCF2L-230ENST00000491028 BTN2A3PQ96KV6 586 aa19.34■□□□□ 0.69
MCF2L-230ENST00000491028 ZSWIM3Q96MP5 696 aa19.34■□□□□ 0.69
MCF2L-230ENST00000491028 ASB16Q96NS5 453 aa19.34■□□□□ 0.69
MCF2L-230ENST00000491028 PEBP4Q96S96 227 aa19.34■□□□□ 0.69
MCF2L-230ENST00000491028 TKTL2Q9H0I9 626 aa19.34■□□□□ 0.69
MCF2L-230ENST00000491028 TRPV4Q9HBA0 871 aa19.34■□□□□ 0.69
MCF2L-230ENST00000491028 GKN1Q9NS71 199 aa19.34■□□□□ 0.69
MCF2L-230ENST00000491028 PCSK1NQ9UHG2 260 aa19.34■□□□□ 0.69
MCF2L-230ENST00000491028 LSM7Q9UK45 103 aaKnown RBP19.34■□□□□ 0.69
MCF2L-230ENST00000491028 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.34■□□□□ 0.69
MCF2L-230ENST00000491028 JRKLQ9Y4A0 524 aa19.34■□□□□ 0.69
MCF2L-230ENST00000491028 DOCK8Q8NF50 2099 aa19.33■□□□□ 0.69
MCF2L-230ENST00000491028 KCNU1A8MYU2 1149 aa19.33■□□□□ 0.68
MCF2L-230ENST00000491028 KIF2AO00139 706 aaPredicted RBP19.33■□□□□ 0.68
MCF2L-230ENST00000491028 PRAMEF12O95522 483 aa19.33■□□□□ 0.68
MCF2L-230ENST00000491028 TUBB4AP04350 444 aa19.33■□□□□ 0.68
MCF2L-230ENST00000491028 HMBSP08397 361 aa19.33■□□□□ 0.68
MCF2L-230ENST00000491028 TCF4P15884 667 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms