RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 YJEFN3A6XGL0 299 aa20.32■□□□□ 0.84
TNFRSF1B-202ENST00000489921 E7ENQ6 273 aa20.32■□□□□ 0.84
TNFRSF1B-202ENST00000489921 GFRA2O00451 464 aa20.32■□□□□ 0.84
TNFRSF1B-202ENST00000489921 PSMA7O14818 248 aa20.32■□□□□ 0.84
TNFRSF1B-202ENST00000489921 ITPKAP23677 461 aa20.32■□□□□ 0.84
TNFRSF1B-202ENST00000489921 ENPP2Q13822 863 aa20.32■□□□□ 0.84
TNFRSF1B-202ENST00000489921 LCLAT1Q6UWP7 414 aa20.32■□□□□ 0.84
TNFRSF1B-202ENST00000489921 SYT12Q8IV01 421 aa20.32■□□□□ 0.84
TNFRSF1B-202ENST00000489921 DEFB119Q8N690 84 aa20.32■□□□□ 0.84
TNFRSF1B-202ENST00000489921 KIAA1257Q9ULG3 409 aa20.32■□□□□ 0.84
TNFRSF1B-202ENST00000489921 SPEGQ15772 3267 aa20.31■□□□□ 0.84
TNFRSF1B-202ENST00000489921 GIPC1O14908 333 aa20.31■□□□□ 0.84
TNFRSF1B-202ENST00000489921 GADD45BO75293 160 aaPredicted RBP20.31■□□□□ 0.84
TNFRSF1B-202ENST00000489921 CALCAP01258 141 aa20.31■□□□□ 0.84
TNFRSF1B-202ENST00000489921 CD19P15391 556 aa20.31■□□□□ 0.84
TNFRSF1B-202ENST00000489921 KCNA4P22459 653 aa20.31■□□□□ 0.84
TNFRSF1B-202ENST00000489921 TBXAS1P24557 533 aaPredicted RBP20.31■□□□□ 0.84
TNFRSF1B-202ENST00000489921 SLC8A3P57103 927 aa20.31■□□□□ 0.84
TNFRSF1B-202ENST00000489921 YWHAEP62258 255 aaKnown RBP20.31■□□□□ 0.84
TNFRSF1B-202ENST00000489921 ADIGQ0VDE8 80 aa20.31■□□□□ 0.84
TNFRSF1B-202ENST00000489921 MORC3Q14149 939 aa20.31■□□□□ 0.84
TNFRSF1B-202ENST00000489921 BSPRYQ5W0U4 402 aa20.31■□□□□ 0.84
TNFRSF1B-202ENST00000489921 TMEM215Q68D42 235 aa20.31■□□□□ 0.84
TNFRSF1B-202ENST00000489921 SDE2Q6IQ49 451 aa20.31■□□□□ 0.84
TNFRSF1B-202ENST00000489921 RSRC2Q7L4I2 434 aaKnown RBP20.31■□□□□ 0.84
TNFRSF1B-202ENST00000489921 FMNL3Q8IVF7 1028 aa20.31■□□□□ 0.84
TNFRSF1B-202ENST00000489921 SCML4Q8N228 414 aa20.31■□□□□ 0.84
TNFRSF1B-202ENST00000489921 SLC35F5Q8WV83 523 aa20.31■□□□□ 0.84
TNFRSF1B-202ENST00000489921 MRGPRX1Q96LB2 322 aa20.31■□□□□ 0.84
TNFRSF1B-202ENST00000489921 THAP10Q9P2Z0 257 aaPredicted RBP20.31■□□□□ 0.84
TNFRSF1B-202ENST00000489921 HESX1Q9UBX0 185 aa20.31■□□□□ 0.84
TNFRSF1B-202ENST00000489921 SFMBT1Q9UHJ3 866 aa20.31■□□□□ 0.84
TNFRSF1B-202ENST00000489921 STRIP2Q9ULQ0 834 aa20.31■□□□□ 0.84
TNFRSF1B-202ENST00000489921 PCDH15Q96QU1 1955 aa20.31■□□□□ 0.84
TNFRSF1B-202ENST00000489921 CKAP5Q14008 2032 aa20.31■□□□□ 0.84
TNFRSF1B-202ENST00000489921 AKAP13Q12802 2813 aa20.31■□□□□ 0.84
TNFRSF1B-202ENST00000489921 ATXN2Q99700 1313 aaKnown RBP20.3■□□□□ 0.84
TNFRSF1B-202ENST00000489921 PAEPP09466 180 aa20.3■□□□□ 0.84
TNFRSF1B-202ENST00000489921 RPL6Q02878 288 aaKnown RBP20.3■□□□□ 0.84
TNFRSF1B-202ENST00000489921 TRIM61Q5EBN2 209 aa20.3■□□□□ 0.84
TNFRSF1B-202ENST00000489921 LYSMD4Q5XG99 296 aa20.3■□□□□ 0.84
TNFRSF1B-202ENST00000489921 PMF1Q6P1K2 205 aa20.3■□□□□ 0.84
TNFRSF1B-202ENST00000489921 SLC23A3Q6PIS1 610 aa20.3■□□□□ 0.84
TNFRSF1B-202ENST00000489921 FOXR2Q6PJQ5 311 aa20.3■□□□□ 0.84
TNFRSF1B-202ENST00000489921 TMEM270Q6UE05 265 aa20.3■□□□□ 0.84
TNFRSF1B-202ENST00000489921 SLC41A1Q8IVJ1 513 aa20.3■□□□□ 0.84
TNFRSF1B-202ENST00000489921 EDEM1Q92611 657 aa20.3■□□□□ 0.84
TNFRSF1B-202ENST00000489921 PLD4Q96BZ4 506 aa20.3■□□□□ 0.84
TNFRSF1B-202ENST00000489921 LRRC4Q9HBW1 653 aa20.3■□□□□ 0.84
TNFRSF1B-202ENST00000489921 TMEM9BQ9NQ34 198 aa20.3■□□□□ 0.84
TNFRSF1B-202ENST00000489921 HOOK1Q9UJC3 728 aaKnown RBP20.3■□□□□ 0.84
TNFRSF1B-202ENST00000489921 STOML2Q9UJZ1 356 aa20.3■□□□□ 0.84
TNFRSF1B-202ENST00000489921 STON1Q9Y6Q2 735 aa20.3■□□□□ 0.84
TNFRSF1B-202ENST00000489921 AP5Z1O43299 807 aa20.29■□□□□ 0.84
TNFRSF1B-202ENST00000489921 SETSIPP0DME0 302 aa20.29■□□□□ 0.84
TNFRSF1B-202ENST00000489921 IL12RB1P42701 662 aa20.29■□□□□ 0.84
TNFRSF1B-202ENST00000489921 DAOAP59103 153 aa20.29■□□□□ 0.84
TNFRSF1B-202ENST00000489921 STIM1Q13586 685 aa20.29■□□□□ 0.84
TNFRSF1B-202ENST00000489921 CNGA2Q16280 664 aa20.29■□□□□ 0.84
TNFRSF1B-202ENST00000489921 KLHL10Q6JEL2 608 aa20.29■□□□□ 0.84
TNFRSF1B-202ENST00000489921 PSAPL1Q6NUJ1 521 aa20.29■□□□□ 0.84
TNFRSF1B-202ENST00000489921 SLC36A4Q6YBV0 504 aa20.29■□□□□ 0.84
TNFRSF1B-202ENST00000489921 ARHGEF19Q8IW93 802 aa20.29■□□□□ 0.84
TNFRSF1B-202ENST00000489921 NELFBQ8WX92 580 aa20.29■□□□□ 0.84
TNFRSF1B-202ENST00000489921 CNGB3Q9NQW8 809 aa20.29■□□□□ 0.84
TNFRSF1B-202ENST00000489921 OLA1Q9NTK5 396 aaKnown RBP20.29■□□□□ 0.84
TNFRSF1B-202ENST00000489921 CYP8B1Q9UNU6 501 aa20.29■□□□□ 0.84
TNFRSF1B-202ENST00000489921 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.29■□□□□ 0.84
TNFRSF1B-202ENST00000489921 MUC22E2RYF6 1773 aaPredicted RBP20.29■□□□□ 0.84
TNFRSF1B-202ENST00000489921 CACNA1BQ00975 2339 aa20.28■□□□□ 0.84
TNFRSF1B-202ENST00000489921 ZNF217O75362 1048 aa20.28■□□□□ 0.84
TNFRSF1B-202ENST00000489921 LCP1P13796 627 aa20.28■□□□□ 0.84
TNFRSF1B-202ENST00000489921 ENGP17813 658 aa20.28■□□□□ 0.84
TNFRSF1B-202ENST00000489921 RGS7P49802 495 aa20.28■□□□□ 0.84
TNFRSF1B-202ENST00000489921 ZNF132P52740 706 aa20.28■□□□□ 0.84
TNFRSF1B-202ENST00000489921 ZNF33AQ06730 810 aa20.28■□□□□ 0.84
TNFRSF1B-202ENST00000489921 FUT11Q495W5 492 aa20.28■□□□□ 0.84
TNFRSF1B-202ENST00000489921 CCDC40Q4G0X9 1142 aa20.28■□□□□ 0.84
TNFRSF1B-202ENST00000489921 DAB2IPQ5VWQ8 1189 aa20.28■□□□□ 0.84
TNFRSF1B-202ENST00000489921 TRIM59Q8IWR1 403 aa20.28■□□□□ 0.84
TNFRSF1B-202ENST00000489921 NT5C1BQ96P26 610 aa20.28■□□□□ 0.84
TNFRSF1B-202ENST00000489921 IPO9Q96P70 1041 aaKnown RBP20.28■□□□□ 0.84
TNFRSF1B-202ENST00000489921 SLC2A11Q9BYW1 496 aa20.28■□□□□ 0.84
TNFRSF1B-202ENST00000489921 MKRN2Q9H000 416 aaKnown RBP20.28■□□□□ 0.84
TNFRSF1B-202ENST00000489921 FSCN3Q9NQT6 498 aa20.28■□□□□ 0.84
TNFRSF1B-202ENST00000489921 ABCC13Q9NSE7 274 aa20.28■□□□□ 0.84
TNFRSF1B-202ENST00000489921 ELOVL2Q9NXB9 296 aa20.28■□□□□ 0.84
TNFRSF1B-202ENST00000489921 HBS1LQ9Y450 684 aaKnown RBP20.28■□□□□ 0.84
TNFRSF1B-202ENST00000489921 PCDHB4Q9Y5E5 795 aa20.28■□□□□ 0.84
TNFRSF1B-202ENST00000489921 ZZEF1O43149 2961 aa20.27■□□□□ 0.84
TNFRSF1B-202ENST00000489921 PIK3R2O00459 728 aa20.27■□□□□ 0.84
TNFRSF1B-202ENST00000489921 P4HA2O15460 535 aa20.27■□□□□ 0.84
TNFRSF1B-202ENST00000489921 MSI1O43347 362 aaKnown RBP20.27■□□□□ 0.84
TNFRSF1B-202ENST00000489921 BRD2P25440 801 aaKnown RBP20.27■□□□□ 0.84
TNFRSF1B-202ENST00000489921 HOXD9P28356 352 aaPredicted RBP20.27■□□□□ 0.84
TNFRSF1B-202ENST00000489921 HOXD12P35452 270 aa20.27■□□□□ 0.84
TNFRSF1B-202ENST00000489921 PPP1R2P41236 205 aa20.27■□□□□ 0.84
TNFRSF1B-202ENST00000489921 SHC2P98077 582 aa20.27■□□□□ 0.84
TNFRSF1B-202ENST00000489921 ZNF234Q14588 700 aa20.27■□□□□ 0.84
TNFRSF1B-202ENST00000489921 SH3PXD2AQ5TCZ1 1133 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms