RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 RASAL2Q9UJF2 1139 aa21.68■■□□□ 1.06
SND1-214ENST00000489417 CCR1P32246 355 aa21.67■■□□□ 1.06
SND1-214ENST00000489417 ADCY2Q08462 1091 aa21.67■■□□□ 1.06
SND1-214ENST00000489417 MMRN1Q13201 1228 aa21.67■■□□□ 1.06
SND1-214ENST00000489417 NNTQ13423 1086 aa21.67■■□□□ 1.06
SND1-214ENST00000489417 PPP2R5DQ14738 602 aa21.67■■□□□ 1.06
SND1-214ENST00000489417 ERCC6LQ2NKX8 1250 aa21.67■■□□□ 1.06
SND1-214ENST00000489417 PPP6R3Q5H9R7 873 aaPredicted RBP21.67■■□□□ 1.06
SND1-214ENST00000489417 PYROXD2Q8N2H3 581 aa21.67■■□□□ 1.06
SND1-214ENST00000489417 ELMOD1Q8N336 334 aa21.67■■□□□ 1.06
SND1-214ENST00000489417 GDPD5Q8WTR4 605 aa21.67■■□□□ 1.06
SND1-214ENST00000489417 MAGEB5Q9BZ81 275 aa21.67■■□□□ 1.06
SND1-214ENST00000489417 ANLNQ9NQW6 1124 aa21.67■■□□□ 1.06
SND1-214ENST00000489417 MAN1C1Q9NR34 630 aa21.67■■□□□ 1.06
SND1-214ENST00000489417 ARHGEF38Q9NXL2 777 aa21.67■■□□□ 1.06
SND1-214ENST00000489417 MARCH2Q9P0N8 246 aa21.67■■□□□ 1.06
SND1-214ENST00000489417 TLR6Q9Y2C9 796 aa21.67■■□□□ 1.06
SND1-214ENST00000489417 PHF2O75151 1096 aa21.66■■□□□ 1.06
SND1-214ENST00000489417 TBX18O95935 607 aa21.66■■□□□ 1.06
SND1-214ENST00000489417 EPCAMP16422 314 aa21.66■■□□□ 1.06
SND1-214ENST00000489417 IL4RP24394 825 aa21.66■■□□□ 1.06
SND1-214ENST00000489417 TBX4P57082 545 aa21.66■■□□□ 1.06
SND1-214ENST00000489417 NAA30Q147X3 362 aaPredicted RBP21.66■■□□□ 1.06
SND1-214ENST00000489417 TRIP4Q15650 581 aaPredicted RBP21.66■■□□□ 1.06
SND1-214ENST00000489417 CYP1B1Q16678 543 aa21.66■■□□□ 1.06
SND1-214ENST00000489417 HECTD3Q5T447 861 aa21.66■■□□□ 1.06
SND1-214ENST00000489417 BBS12Q6ZW61 710 aa21.66■■□□□ 1.06
SND1-214ENST00000489417 C12orf50Q8NA57 414 aaPredicted RBP21.66■■□□□ 1.06
SND1-214ENST00000489417 TSC1Q92574 1164 aa21.66■■□□□ 1.06
SND1-214ENST00000489417 FAF2Q96CS3 445 aa21.66■■□□□ 1.06
SND1-214ENST00000489417 RNF157Q96PX1 679 aa21.66■■□□□ 1.06
SND1-214ENST00000489417 MAK16Q9BXY0 300 aaKnown RBP21.66■■□□□ 1.06
SND1-214ENST00000489417 DDX47Q9H0S4 455 aaKnown RBP21.66■■□□□ 1.06
SND1-214ENST00000489417 RCOR3Q9P2K3 495 aaPredicted RBP21.66■■□□□ 1.06
SND1-214ENST00000489417 I6L893 689 aaPredicted RBP21.65■■□□□ 1.06
SND1-214ENST00000489417 CST8O60676 142 aa21.65■■□□□ 1.06
SND1-214ENST00000489417 ZMYND10O75800 440 aa21.65■■□□□ 1.06
SND1-214ENST00000489417 F11P03951 625 aa21.65■■□□□ 1.06
SND1-214ENST00000489417 ARL4AP40617 200 aa21.65■■□□□ 1.06
SND1-214ENST00000489417 TUBP50607 506 aa21.65■■□□□ 1.06
SND1-214ENST00000489417 TFDP2Q14188 446 aa21.65■■□□□ 1.06
SND1-214ENST00000489417 ANKRD20A8PQ5CZ79 823 aa21.65■■□□□ 1.06
SND1-214ENST00000489417 MIB1Q86YT6 1006 aa21.65■■□□□ 1.06
SND1-214ENST00000489417 HDAC7Q8WUI4 952 aa21.65■■□□□ 1.06
SND1-214ENST00000489417 MAGOHBQ96A72 148 aaKnown RBP21.65■■□□□ 1.06
SND1-214ENST00000489417 TIFAQ96CG3 184 aa21.65■■□□□ 1.06
SND1-214ENST00000489417 SLC39A13Q96H72 371 aa21.65■■□□□ 1.06
SND1-214ENST00000489417 FCRL2Q96LA5 508 aaPredicted RBP21.65■■□□□ 1.06
SND1-214ENST00000489417 SLITRK6Q9H5Y7 841 aa21.65■■□□□ 1.06
SND1-214ENST00000489417 IL21Q9HBE4 155 aa21.65■■□□□ 1.06
SND1-214ENST00000489417 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.65■■□□□ 1.06
SND1-214ENST00000489417 DNMT3LQ9UJW3 386 aa21.65■■□□□ 1.06
SND1-214ENST00000489417 R3HDM2Q9Y2K5 976 aaKnown RBP21.65■■□□□ 1.06
SND1-214ENST00000489417 SLC12A8A0AV02 714 aa21.64■■□□□ 1.06
SND1-214ENST00000489417 EPOPA6NHQ4 379 aa21.64■■□□□ 1.06
SND1-214ENST00000489417 H3BRJ5 948 aa21.64■■□□□ 1.06
SND1-214ENST00000489417 PER2O15055 1255 aa21.64■■□□□ 1.06
SND1-214ENST00000489417 CCL16O15467 120 aa21.64■■□□□ 1.06
SND1-214ENST00000489417 SLC2A3P11169 496 aa21.64■■□□□ 1.06
SND1-214ENST00000489417 CHRNA3P32297 505 aa21.64■■□□□ 1.06
SND1-214ENST00000489417 ATP5C1P36542 298 aaKnown RBP21.64■■□□□ 1.06
SND1-214ENST00000489417 DYNLT1P63172 113 aa21.64■■□□□ 1.06
SND1-214ENST00000489417 PABPC1LQ4VXU2 614 aaKnown RBP21.64■■□□□ 1.06
SND1-214ENST00000489417 CCDC70Q6NSX1 233 aa21.64■■□□□ 1.06
SND1-214ENST00000489417 C8orf74Q6P047 294 aa21.64■■□□□ 1.06
SND1-214ENST00000489417 KLHDC10Q6PID8 442 aa21.64■■□□□ 1.06
SND1-214ENST00000489417 ADGRD2Q7Z7M1 963 aa21.64■■□□□ 1.06
SND1-214ENST00000489417 TMEM150AQ86TG1 271 aa21.64■■□□□ 1.06
SND1-214ENST00000489417 TMC8Q8IU68 726 aa21.64■■□□□ 1.06
SND1-214ENST00000489417 TRAF3IP1Q8TDR0 691 aaPredicted RBP21.64■■□□□ 1.06
SND1-214ENST00000489417 C1orf54Q8WWF1 131 aa21.64■■□□□ 1.06
SND1-214ENST00000489417 CSPG4P5Q96PW8 444 aa21.64■■□□□ 1.06
SND1-214ENST00000489417 LRRC3Q9BY71 257 aa21.64■■□□□ 1.06
SND1-214ENST00000489417 DCLK3Q9C098 648 aa21.64■■□□□ 1.06
SND1-214ENST00000489417 HOMER3Q9NSC5 361 aa21.64■■□□□ 1.06
SND1-214ENST00000489417 CWC15Q9P013 229 aaKnown RBP21.64■■□□□ 1.06
SND1-214ENST00000489417 DPP7Q9UHL4 492 aa21.64■■□□□ 1.06
SND1-214ENST00000489417 RHOXF2BP0C7M4 288 aa21.63■■□□□ 1.05
SND1-214ENST00000489417 HOXA9P31269 272 aa21.63■■□□□ 1.05
SND1-214ENST00000489417 KPNA1P52294 538 aaPredicted RBP21.63■■□□□ 1.05
SND1-214ENST00000489417 SMAD3P84022 425 aaKnown RBP21.63■■□□□ 1.05
SND1-214ENST00000489417 HS6ST3Q8IZP7 471 aa21.63■■□□□ 1.05
SND1-214ENST00000489417 PCDH19Q8TAB3 1148 aa21.63■■□□□ 1.05
SND1-214ENST00000489417 HAPLN3Q96S86 360 aa21.63■■□□□ 1.05
SND1-214ENST00000489417 RHOXF2Q9BQY4 288 aa21.63■■□□□ 1.05
SND1-214ENST00000489417 LRRC1Q9BTT6 524 aa21.63■■□□□ 1.05
SND1-214ENST00000489417 NACA2Q9H009 215 aa21.63■■□□□ 1.05
SND1-214ENST00000489417 OSBPL2Q9H1P3 480 aa21.63■■□□□ 1.05
SND1-214ENST00000489417 LRRC19Q9H756 370 aa21.63■■□□□ 1.05
SND1-214ENST00000489417 HBS1LQ9Y450 684 aaKnown RBP21.63■■□□□ 1.05
SND1-214ENST00000489417 KCNU1A8MYU2 1149 aa21.63■■□□□ 1.05
SND1-214ENST00000489417 COCHO43405 550 aa21.63■■□□□ 1.05
SND1-214ENST00000489417 APOEP02649 317 aa21.63■■□□□ 1.05
SND1-214ENST00000489417 GOT1P17174 413 aa21.63■■□□□ 1.05
SND1-214ENST00000489417 GABRR2P28476 465 aa21.63■■□□□ 1.05
SND1-214ENST00000489417 FNTAP49354 379 aa21.63■■□□□ 1.05
SND1-214ENST00000489417 RGS19P49795 217 aa21.63■■□□□ 1.05
SND1-214ENST00000489417 ZNF135P52742 658 aaPredicted RBP21.63■■□□□ 1.05
SND1-214ENST00000489417 SEMA3BQ13214 749 aa21.63■■□□□ 1.05
SND1-214ENST00000489417 ELF2Q15723 593 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms