RNA–Protein interactions for RNA: ENST00000489318.1

C9orf3-220, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 682 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-220ENST00000489318 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.92□□□□□ -0.5
C9orf3-220ENST00000489318 ZNF840PA6NDX5 716 aa11.92□□□□□ -0.5
C9orf3-220ENST00000489318 KCNU1A8MYU2 1149 aa11.92□□□□□ -0.5
C9orf3-220ENST00000489318 PRRG1O14668 218 aa11.92□□□□□ -0.5
C9orf3-220ENST00000489318 RAD51CO43502 376 aa11.92□□□□□ -0.5
C9orf3-220ENST00000489318 GLUD1P00367 558 aa11.92□□□□□ -0.5
C9orf3-220ENST00000489318 POU2F2P09086 479 aa11.92□□□□□ -0.5
C9orf3-220ENST00000489318 TGM2P21980 687 aa11.92□□□□□ -0.5
C9orf3-220ENST00000489318 TNFRSF8P28908 595 aa11.92□□□□□ -0.5
C9orf3-220ENST00000489318 COILP38432 576 aaPredicted RBP11.92□□□□□ -0.5
C9orf3-220ENST00000489318 HCAR3P49019 387 aa11.92□□□□□ -0.5
C9orf3-220ENST00000489318 EPHB3P54753 998 aa11.92□□□□□ -0.5
C9orf3-220ENST00000489318 NRG1Q02297 640 aaPredicted RBP11.92□□□□□ -0.5
C9orf3-220ENST00000489318 RING1Q06587 406 aa11.92□□□□□ -0.5
C9orf3-220ENST00000489318 TFDP2Q14188 446 aa11.92□□□□□ -0.5
C9orf3-220ENST00000489318 KRT81Q14533 505 aa11.92□□□□□ -0.5
C9orf3-220ENST00000489318 RAB30Q15771 203 aa11.92□□□□□ -0.5
C9orf3-220ENST00000489318 ANKRD20A8PQ5CZ79 823 aa11.92□□□□□ -0.5
C9orf3-220ENST00000489318 PLPP4Q5VZY2 271 aa11.92□□□□□ -0.5
C9orf3-220ENST00000489318 CCDC70Q6NSX1 233 aa11.92□□□□□ -0.5
C9orf3-220ENST00000489318 ADAT2Q7Z6V5 191 aaKnown RBP11.92□□□□□ -0.5
C9orf3-220ENST00000489318 ITIH5Q86UX2 942 aa11.92□□□□□ -0.5
C9orf3-220ENST00000489318 KLHL7Q8IXQ5 586 aa11.92□□□□□ -0.5
C9orf3-220ENST00000489318 PQLC3Q8N755 202 aa11.92□□□□□ -0.5
C9orf3-220ENST00000489318 PLD5Q8N7P1 536 aa11.92□□□□□ -0.5
C9orf3-220ENST00000489318 TTC13Q8NBP0 860 aa11.92□□□□□ -0.5
C9orf3-220ENST00000489318 PCDH19Q8TAB3 1148 aa11.92□□□□□ -0.5
C9orf3-220ENST00000489318 SLC35B2Q8TB61 432 aa11.92□□□□□ -0.5
C9orf3-220ENST00000489318 HDAC7Q8WUI4 952 aa11.92□□□□□ -0.5
C9orf3-220ENST00000489318 SEC14L1Q92503 715 aa11.92□□□□□ -0.5
C9orf3-220ENST00000489318 ANKRD7Q92527 254 aa11.92□□□□□ -0.5
C9orf3-220ENST00000489318 NKD2Q969F2 451 aaPredicted RBP11.92□□□□□ -0.5
C9orf3-220ENST00000489318 FCRL2Q96LA5 508 aaPredicted RBP11.92□□□□□ -0.5
C9orf3-220ENST00000489318 CSPG4P5Q96PW8 444 aa11.92□□□□□ -0.5
C9orf3-220ENST00000489318 PNKPQ96T60 521 aa11.92□□□□□ -0.5
C9orf3-220ENST00000489318 HEMGNQ9BXL5 484 aa11.92□□□□□ -0.5
C9orf3-220ENST00000489318 CALN1Q9BXU9 219 aa11.92□□□□□ -0.5
C9orf3-220ENST00000489318 LMAN2LQ9H0V9 348 aa11.92□□□□□ -0.5
C9orf3-220ENST00000489318 OSBPL2Q9H1P3 480 aa11.92□□□□□ -0.5
C9orf3-220ENST00000489318 DHX35Q9H5Z1 703 aaKnown RBP11.92□□□□□ -0.5
C9orf3-220ENST00000489318 STIM2Q9P246 746 aa11.92□□□□□ -0.5
C9orf3-220ENST00000489318 DOCK4Q8N1I0 1966 aa11.91□□□□□ -0.5
C9orf3-220ENST00000489318 SYNJ2BP-COX16A0A087WUM0 186 aa11.91□□□□□ -0.5
C9orf3-220ENST00000489318 FAM187AA6NFU0 413 aa11.91□□□□□ -0.5
C9orf3-220ENST00000489318 MSI1O43347 362 aaKnown RBP11.91□□□□□ -0.5
C9orf3-220ENST00000489318 LIASO43766 372 aa11.91□□□□□ -0.5
C9orf3-220ENST00000489318 TLR5O60602 858 aa11.91□□□□□ -0.5
C9orf3-220ENST00000489318 CST8O60676 142 aa11.91□□□□□ -0.5
C9orf3-220ENST00000489318 PAPLNO95428 1278 aa11.91□□□□□ -0.5
C9orf3-220ENST00000489318 OLFM2O95897 454 aa11.91□□□□□ -0.5
C9orf3-220ENST00000489318 OAS1P00973 400 aaKnown RBP11.91□□□□□ -0.5
C9orf3-220ENST00000489318 C8AP07357 584 aa11.91□□□□□ -0.5
C9orf3-220ENST00000489318 RHOXF2BP0C7M4 288 aa11.91□□□□□ -0.5
C9orf3-220ENST00000489318 SLC2A3P11169 496 aa11.91□□□□□ -0.5
C9orf3-220ENST00000489318 HOXA9P31269 272 aa11.91□□□□□ -0.5
C9orf3-220ENST00000489318 HOXC13P31276 330 aa11.91□□□□□ -0.5
C9orf3-220ENST00000489318 CCR1P32246 355 aa11.91□□□□□ -0.5
C9orf3-220ENST00000489318 HTR7P34969 479 aa11.91□□□□□ -0.5
C9orf3-220ENST00000489318 IRS1P35568 1242 aa11.91□□□□□ -0.5
C9orf3-220ENST00000489318 PBX2P40425 430 aa11.91□□□□□ -0.5
C9orf3-220ENST00000489318 PTGIRP43119 386 aa11.91□□□□□ -0.5
C9orf3-220ENST00000489318 MMRN1Q13201 1228 aa11.91□□□□□ -0.5
C9orf3-220ENST00000489318 MTA1Q13330 715 aa11.91□□□□□ -0.5
C9orf3-220ENST00000489318 DPYSQ14117 519 aa11.91□□□□□ -0.5
C9orf3-220ENST00000489318 OASLQ15646 514 aaKnown RBP11.91□□□□□ -0.5
C9orf3-220ENST00000489318 TRIP4Q15650 581 aaPredicted RBP11.91□□□□□ -0.5
C9orf3-220ENST00000489318 ARTNQ5T4W7 220 aa11.91□□□□□ -0.5
C9orf3-220ENST00000489318 MANEALQ5VSG8 457 aa11.91□□□□□ -0.5
C9orf3-220ENST00000489318 CCDC137Q6PK04 289 aaKnown RBP11.91□□□□□ -0.5
C9orf3-220ENST00000489318 MAATS1Q7Z4T9 603 aa11.91□□□□□ -0.5
C9orf3-220ENST00000489318 DNAJB7Q7Z6W7 309 aaPredicted RBP11.91□□□□□ -0.5
C9orf3-220ENST00000489318 TMEM150AQ86TG1 271 aa11.91□□□□□ -0.5
C9orf3-220ENST00000489318 TADA2BQ86TJ2 420 aa11.91□□□□□ -0.5
C9orf3-220ENST00000489318 TMC8Q8IU68 726 aa11.91□□□□□ -0.5
C9orf3-220ENST00000489318 TNS4Q8IZW8 715 aa11.91□□□□□ -0.5
C9orf3-220ENST00000489318 KREMEN2Q8NCW0 462 aa11.91□□□□□ -0.5
C9orf3-220ENST00000489318 CCDC26Q8TAB7 109 aa11.91□□□□□ -0.5
C9orf3-220ENST00000489318 HAPLN3Q96S86 360 aa11.91□□□□□ -0.5
C9orf3-220ENST00000489318 RHOXF2Q9BQY4 288 aa11.91□□□□□ -0.5
C9orf3-220ENST00000489318 LRRC3Q9BY71 257 aa11.91□□□□□ -0.5
C9orf3-220ENST00000489318 TKTL2Q9H0I9 626 aa11.91□□□□□ -0.5
C9orf3-220ENST00000489318 WDCPQ9H6R7 721 aa11.91□□□□□ -0.5
C9orf3-220ENST00000489318 IL21Q9HBE4 155 aa11.91□□□□□ -0.5
C9orf3-220ENST00000489318 TMPRSS4Q9NRS4 437 aa11.91□□□□□ -0.5
C9orf3-220ENST00000489318 CWC15Q9P013 229 aaKnown RBP11.91□□□□□ -0.5
C9orf3-220ENST00000489318 COX16Q9P0S2 106 aa11.91□□□□□ -0.5
C9orf3-220ENST00000489318 SFMBT1Q9UHJ3 866 aa11.91□□□□□ -0.5
C9orf3-220ENST00000489318 AMACRQ9UHK6 382 aa11.91□□□□□ -0.5
C9orf3-220ENST00000489318 DMGDHQ9UI17 866 aaKnown RBP11.91□□□□□ -0.5
C9orf3-220ENST00000489318 NEU3Q9UQ49 428 aa11.91□□□□□ -0.5
C9orf3-220ENST00000489318 H3BRJ5 948 aa11.9□□□□□ -0.5
C9orf3-220ENST00000489318 APOL1O14791 398 aa11.9□□□□□ -0.5
C9orf3-220ENST00000489318 HEXIM1O94992 359 aaKnown RBP11.9□□□□□ -0.5
C9orf3-220ENST00000489318 F11P03951 625 aa11.9□□□□□ -0.5
C9orf3-220ENST00000489318 H2AFXP16104 143 aaPredicted RBP11.9□□□□□ -0.5
C9orf3-220ENST00000489318 GOT1P17174 413 aa11.9□□□□□ -0.5
C9orf3-220ENST00000489318 KLRC2P26717 231 aa11.9□□□□□ -0.5
C9orf3-220ENST00000489318 ARL4AP40617 200 aa11.9□□□□□ -0.5
C9orf3-220ENST00000489318 KPNA1P52294 538 aaPredicted RBP11.9□□□□□ -0.5
C9orf3-220ENST00000489318 EPHA5P54756 1037 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms