RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 LMBRD1Q9NUN5 540 aa14.64□□□□□ -0.07
VTI1A-206ENST00000489142 CACNA2D2Q9NY47 1150 aa14.64□□□□□ -0.07
VTI1A-206ENST00000489142 DLL3Q9NYJ7 618 aa14.64□□□□□ -0.07
VTI1A-206ENST00000489142 CYTH4Q9UIA0 394 aa14.64□□□□□ -0.07
VTI1A-206ENST00000489142 CNTN6Q9UQ52 1028 aa14.64□□□□□ -0.07
VTI1A-206ENST00000489142 PLXND1Q9Y4D7 1925 aa14.64□□□□□ -0.07
VTI1A-206ENST00000489142 LAMA1P25391 3075 aa14.64□□□□□ -0.07
VTI1A-206ENST00000489142 TNRC6BQ9UPQ9 1833 aaKnown RBP14.64□□□□□ -0.07
VTI1A-206ENST00000489142 DCDC2BA2VCK2 349 aa14.63□□□□□ -0.07
VTI1A-206ENST00000489142 WASH3PC4AMC7 463 aa14.63□□□□□ -0.07
VTI1A-206ENST00000489142 LRP3O75074 770 aa14.63□□□□□ -0.07
VTI1A-206ENST00000489142 LTFP02788 710 aa14.63□□□□□ -0.07
VTI1A-206ENST00000489142 GABRG2P18507 467 aa14.63□□□□□ -0.07
VTI1A-206ENST00000489142 PON1P27169 355 aa14.63□□□□□ -0.07
VTI1A-206ENST00000489142 GNA15P30679 374 aa14.63□□□□□ -0.07
VTI1A-206ENST00000489142 NTSR1P30989 418 aa14.63□□□□□ -0.07
VTI1A-206ENST00000489142 CHKAP35790 457 aa14.63□□□□□ -0.07
VTI1A-206ENST00000489142 MPLP40238 635 aa14.63□□□□□ -0.07
VTI1A-206ENST00000489142 GPD2P43304 727 aa14.63□□□□□ -0.07
VTI1A-206ENST00000489142 HARS2P49590 506 aaKnown RBP14.63□□□□□ -0.07
VTI1A-206ENST00000489142 SGSHP51688 502 aa14.63□□□□□ -0.07
VTI1A-206ENST00000489142 ATXN1P54253 815 aaKnown RBP14.63□□□□□ -0.07
VTI1A-206ENST00000489142 MFAP3P55082 362 aa14.63□□□□□ -0.07
VTI1A-206ENST00000489142 ELF2Q15723 593 aa14.63□□□□□ -0.07
VTI1A-206ENST00000489142 EXOC3L4Q17RC7 722 aa14.63□□□□□ -0.07
VTI1A-206ENST00000489142 GEN1Q17RS7 908 aa14.63□□□□□ -0.07
VTI1A-206ENST00000489142 NUDT18Q6ZVK8 323 aa14.63□□□□□ -0.07
VTI1A-206ENST00000489142 ARMCX6Q7L4S7 300 aa14.63□□□□□ -0.07
VTI1A-206ENST00000489142 SCML4Q8N228 414 aa14.63□□□□□ -0.07
VTI1A-206ENST00000489142 ADAM32Q8TC27 787 aa14.63□□□□□ -0.07
VTI1A-206ENST00000489142 THAP9Q9H5L6 903 aa14.63□□□□□ -0.07
VTI1A-206ENST00000489142 SIX2Q9NPC8 291 aa14.63□□□□□ -0.07
VTI1A-206ENST00000489142 APEX2Q9UBZ4 518 aa14.63□□□□□ -0.07
VTI1A-206ENST00000489142 TJP2Q9UDY2 1190 aa14.63□□□□□ -0.07
VTI1A-206ENST00000489142 HBS1LQ9Y450 684 aaKnown RBP14.63□□□□□ -0.07
VTI1A-206ENST00000489142 GOLGA6L7A0A1B0GV03 622 aa14.62□□□□□ -0.07
VTI1A-206ENST00000489142 A0A1W2PQF6 199 aa14.62□□□□□ -0.07
VTI1A-206ENST00000489142 MED19A0JLT2 244 aaPredicted RBP14.62□□□□□ -0.07
VTI1A-206ENST00000489142 FAM170AA1A519 330 aa14.62□□□□□ -0.07
VTI1A-206ENST00000489142 PRR5-ARHGAP8B1AHC4 643 aa14.62□□□□□ -0.07
VTI1A-206ENST00000489142 RHOBTB1O94844 696 aa14.62□□□□□ -0.07
VTI1A-206ENST00000489142 CYBBP04839 570 aa14.62□□□□□ -0.07
VTI1A-206ENST00000489142 FYNP06241 537 aa14.62□□□□□ -0.07
VTI1A-206ENST00000489142 PRKCSHP14314 528 aaPredicted RBP14.62□□□□□ -0.07
VTI1A-206ENST00000489142 ARHGAP8P85298 464 aa14.62□□□□□ -0.07
VTI1A-206ENST00000489142 AASDHQ4L235 1098 aaPredicted RBP14.62□□□□□ -0.07
VTI1A-206ENST00000489142 PMS2CLQ68D20 193 aa14.62□□□□□ -0.07
VTI1A-206ENST00000489142 MSANTD2Q6P1R3 559 aa14.62□□□□□ -0.07
VTI1A-206ENST00000489142 RFWD3Q6PCD5 774 aa14.62□□□□□ -0.07
VTI1A-206ENST00000489142 TRMT11Q7Z4G4 463 aaKnown RBP14.62□□□□□ -0.07
VTI1A-206ENST00000489142 PASD1Q8IV76 773 aa14.62□□□□□ -0.07
VTI1A-206ENST00000489142 FAM217AQ8IXS0 508 aa14.62□□□□□ -0.07
VTI1A-206ENST00000489142 CPXM2Q8N436 756 aa14.62□□□□□ -0.07
VTI1A-206ENST00000489142 OLIG1Q8TAK6 271 aa14.62□□□□□ -0.07
VTI1A-206ENST00000489142 ZNF606Q8WXB4 792 aa14.62□□□□□ -0.07
VTI1A-206ENST00000489142 SORCS1Q8WY21 1168 aa14.62□□□□□ -0.07
VTI1A-206ENST00000489142 IRGQQ8WZA9 623 aa14.62□□□□□ -0.07
VTI1A-206ENST00000489142 FAM149B1Q96BN6 582 aa14.62□□□□□ -0.07
VTI1A-206ENST00000489142 LOXL4Q96JB6 756 aa14.62□□□□□ -0.07
VTI1A-206ENST00000489142 HSFY1Q96LI6 401 aa14.62□□□□□ -0.07
VTI1A-206ENST00000489142 CD93Q9NPY3 652 aa14.62□□□□□ -0.07
VTI1A-206ENST00000489142 MBD1Q9UIS9 605 aaPredicted RBP14.62□□□□□ -0.07
VTI1A-206ENST00000489142 FBXO10Q9UK96 956 aa14.62□□□□□ -0.07
VTI1A-206ENST00000489142 NAALADL1Q9UQQ1 740 aa14.62□□□□□ -0.07
VTI1A-206ENST00000489142 STARD13Q9Y3M8 1113 aa14.62□□□□□ -0.07
VTI1A-206ENST00000489142 CACNA1AO00555 2505 aa14.61□□□□□ -0.07
VTI1A-206ENST00000489142 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.61□□□□□ -0.07
VTI1A-206ENST00000489142 E5RJQ4 531 aa14.61□□□□□ -0.07
VTI1A-206ENST00000489142 MED7O43513 233 aa14.61□□□□□ -0.07
VTI1A-206ENST00000489142 FBXO21O94952 628 aa14.61□□□□□ -0.07
VTI1A-206ENST00000489142 NCAM1P13591 858 aa14.61□□□□□ -0.07
VTI1A-206ENST00000489142 NDUFV2P19404 249 aa14.61□□□□□ -0.07
VTI1A-206ENST00000489142 HOXD9P28356 352 aaPredicted RBP14.61□□□□□ -0.07
VTI1A-206ENST00000489142 DHPSP49366 369 aaPredicted RBP14.61□□□□□ -0.07
VTI1A-206ENST00000489142 MAN2A1Q16706 1144 aa14.61□□□□□ -0.07
VTI1A-206ENST00000489142 MAP7D1Q3KQU3 841 aa14.61□□□□□ -0.07
VTI1A-206ENST00000489142 MIIPQ5JXC2 388 aa14.61□□□□□ -0.07
VTI1A-206ENST00000489142 ERMP1Q7Z2K6 904 aa14.61□□□□□ -0.07
VTI1A-206ENST00000489142 ANKS1BQ7Z6G8 1248 aa14.61□□□□□ -0.07
VTI1A-206ENST00000489142 TMEFF1Q8IYR6 380 aa14.61□□□□□ -0.07
VTI1A-206ENST00000489142 DEFB119Q8N690 84 aa14.61□□□□□ -0.07
VTI1A-206ENST00000489142 C12orf50Q8NA57 414 aaPredicted RBP14.61□□□□□ -0.07
VTI1A-206ENST00000489142 GPT2Q8TD30 523 aa14.61□□□□□ -0.07
VTI1A-206ENST00000489142 KCNV2Q8TDN2 545 aa14.61□□□□□ -0.07
VTI1A-206ENST00000489142 IPO4Q8TEX9 1081 aaKnown RBP14.61□□□□□ -0.07
VTI1A-206ENST00000489142 SHC3Q92529 594 aa14.61□□□□□ -0.07
VTI1A-206ENST00000489142 GOLGA1Q92805 767 aa14.61□□□□□ -0.07
VTI1A-206ENST00000489142 PIWIL1Q96J94 861 aaKnown RBP14.61□□□□□ -0.07
VTI1A-206ENST00000489142 SAMSN1Q9NSI8 373 aaKnown RBP14.61□□□□□ -0.07
VTI1A-206ENST00000489142 CALCOCO1Q9P1Z2 691 aa14.61□□□□□ -0.07
VTI1A-206ENST00000489142 DNAJC12Q9UKB3 198 aa14.61□□□□□ -0.07
VTI1A-206ENST00000489142 ATXN2Q99700 1313 aaKnown RBP14.61□□□□□ -0.07
VTI1A-206ENST00000489142 PATE3B3GLJ2 98 aa14.6□□□□□ -0.07
VTI1A-206ENST00000489142 PES1O00541 588 aaKnown RBP14.6□□□□□ -0.07
VTI1A-206ENST00000489142 PAPSS1O43252 624 aaPredicted RBP14.6□□□□□ -0.07
VTI1A-206ENST00000489142 MAP3K13O43283 966 aa14.6□□□□□ -0.07
VTI1A-206ENST00000489142 CAVIN2O95810 425 aa14.6□□□□□ -0.07
VTI1A-206ENST00000489142 ZNF806P0C7X5 589 aa14.6□□□□□ -0.07
VTI1A-206ENST00000489142 SLC6A4P31645 630 aa14.6□□□□□ -0.07
VTI1A-206ENST00000489142 P2RY2P41231 377 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms