RNA–Protein interactions for RNA: ENST00000489049.5

PDCD4-209, Transcript of programmed cell death 4, humanhuman

TSL 2

Gene PDCD4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-209ENST00000489049 SYF2O95926 243 aaKnown RBP6.95□□□□□ -1.3
PDCD4-209ENST00000489049 ITGB3P05106 788 aa6.95□□□□□ -1.3
PDCD4-209ENST00000489049 IVLP07476 585 aa6.95□□□□□ -1.3
PDCD4-209ENST00000489049 KRT19P08727 400 aa6.95□□□□□ -1.3
PDCD4-209ENST00000489049 NUDT17P0C025 328 aa6.95□□□□□ -1.3
PDCD4-209ENST00000489049 MYBL2P10244 700 aa6.95□□□□□ -1.3
PDCD4-209ENST00000489049 RARGP13631 454 aa6.95□□□□□ -1.3
PDCD4-209ENST00000489049 CD58P19256 250 aa6.95□□□□□ -1.3
PDCD4-209ENST00000489049 ARNTP27540 789 aa6.95□□□□□ -1.3
PDCD4-209ENST00000489049 HOXA11P31270 313 aaPredicted RBP6.95□□□□□ -1.3
PDCD4-209ENST00000489049 CYP2C19P33261 490 aa6.95□□□□□ -1.3
PDCD4-209ENST00000489049 ACADSBP45954 432 aa6.95□□□□□ -1.3
PDCD4-209ENST00000489049 SLC8A3P57103 927 aa6.95□□□□□ -1.3
PDCD4-209ENST00000489049 GJA9P57773 515 aa6.95□□□□□ -1.3
PDCD4-209ENST00000489049 RNASE9P60153 205 aaKnown RBP6.95□□□□□ -1.3
PDCD4-209ENST00000489049 PTK6Q13882 451 aa6.95□□□□□ -1.3
PDCD4-209ENST00000489049 PPP1R7Q15435 360 aa6.95□□□□□ -1.3
PDCD4-209ENST00000489049 BOLA3Q53S33 107 aa6.95□□□□□ -1.3
PDCD4-209ENST00000489049 TFDP3Q5H9I0 405 aa6.95□□□□□ -1.3
PDCD4-209ENST00000489049 ARHGAP17Q68EM7 881 aa6.95□□□□□ -1.3
PDCD4-209ENST00000489049 C4orf22Q6V702 233 aa6.95□□□□□ -1.3
PDCD4-209ENST00000489049 TMC3Q7Z5M5 1100 aa6.95□□□□□ -1.3
PDCD4-209ENST00000489049 SAPCD2Q86UD0 394 aa6.95□□□□□ -1.3
PDCD4-209ENST00000489049 SESTD1Q86VW0 696 aa6.95□□□□□ -1.3
PDCD4-209ENST00000489049 RELL1Q8IUW5 271 aa6.95□□□□□ -1.3
PDCD4-209ENST00000489049 MAP7D3Q8IWC1 876 aa6.95□□□□□ -1.3
PDCD4-209ENST00000489049 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.95□□□□□ -1.3
PDCD4-209ENST00000489049 CRYBG2Q8N1P7 616 aa6.95□□□□□ -1.3
PDCD4-209ENST00000489049 SLC4A11Q8NBS3 891 aa6.95□□□□□ -1.3
PDCD4-209ENST00000489049 C3orf58Q8NDZ4 430 aa6.95□□□□□ -1.3
PDCD4-209ENST00000489049 KAT2BQ92831 832 aa6.95□□□□□ -1.3
PDCD4-209ENST00000489049 NKD2Q969F2 451 aaPredicted RBP6.95□□□□□ -1.3
PDCD4-209ENST00000489049 SNF8Q96H20 258 aa6.95□□□□□ -1.3
PDCD4-209ENST00000489049 TNIP3Q96KP6 325 aa6.95□□□□□ -1.3
PDCD4-209ENST00000489049 FAM161BQ96MY7 647 aa6.95□□□□□ -1.3
PDCD4-209ENST00000489049 TBCBQ99426 244 aa6.95□□□□□ -1.3
PDCD4-209ENST00000489049 CNPY3Q9BT09 278 aa6.95□□□□□ -1.3
PDCD4-209ENST00000489049 ROPN1BQ9BZX4 212 aaPredicted RBP6.95□□□□□ -1.3
PDCD4-209ENST00000489049 TRIM6Q9C030 488 aaPredicted RBP6.95□□□□□ -1.3
PDCD4-209ENST00000489049 TNKS2Q9H2K2 1166 aa6.95□□□□□ -1.3
PDCD4-209ENST00000489049 PABPC3Q9H361 631 aaKnown RBP6.95□□□□□ -1.3
PDCD4-209ENST00000489049 GOLPH3Q9H4A6 298 aa6.95□□□□□ -1.3
PDCD4-209ENST00000489049 ROPN1Q9HAT0 212 aaPredicted RBP6.95□□□□□ -1.3
PDCD4-209ENST00000489049 SSU72Q9NP77 194 aaKnown RBP6.95□□□□□ -1.3
PDCD4-209ENST00000489049 ZDHHC18Q9NUE0 388 aa6.95□□□□□ -1.3
PDCD4-209ENST00000489049 EHD2Q9NZN4 543 aa6.95□□□□□ -1.3
PDCD4-209ENST00000489049 CWC15Q9P013 229 aaKnown RBP6.95□□□□□ -1.3
PDCD4-209ENST00000489049 VPS18Q9P253 973 aa6.95□□□□□ -1.3
PDCD4-209ENST00000489049 HESX1Q9UBX0 185 aa6.95□□□□□ -1.3
PDCD4-209ENST00000489049 VTI1BQ9UEU0 232 aa6.95□□□□□ -1.3
PDCD4-209ENST00000489049 CPA4Q9UI42 421 aa6.95□□□□□ -1.3
PDCD4-209ENST00000489049 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.95□□□□□ -1.3
PDCD4-209ENST00000489049 CACNA1AO00555 2505 aa6.94□□□□□ -1.3
PDCD4-209ENST00000489049 TRPM7Q96QT4 1865 aa6.94□□□□□ -1.3
PDCD4-209ENST00000489049 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.94□□□□□ -1.3
PDCD4-209ENST00000489049 H3BQF6 201 aa6.94□□□□□ -1.3
PDCD4-209ENST00000489049 AGPSO00116 658 aa6.94□□□□□ -1.3
PDCD4-209ENST00000489049 IGF2BP3O00425 579 aaKnown RBP eCLIP6.94□□□□□ -1.3
PDCD4-209ENST00000489049 SHOX2O60902 331 aaPredicted RBP6.94□□□□□ -1.3
PDCD4-209ENST00000489049 TCEA3O75764 348 aa6.94□□□□□ -1.3
PDCD4-209ENST00000489049 NPTXRO95502 500 aa6.94□□□□□ -1.3
PDCD4-209ENST00000489049 GJB1P08034 283 aa6.94□□□□□ -1.3
PDCD4-209ENST00000489049 NME2P22392 152 aa6.94□□□□□ -1.3
PDCD4-209ENST00000489049 VAMP1P23763 118 aa6.94□□□□□ -1.3
PDCD4-209ENST00000489049 HOXD10P28358 340 aa6.94□□□□□ -1.3
PDCD4-209ENST00000489049 RPL9P32969 192 aaKnown RBP6.94□□□□□ -1.3
PDCD4-209ENST00000489049 HSD17B3P37058 310 aa6.94□□□□□ -1.3
PDCD4-209ENST00000489049 RAB27AP51159 221 aa6.94□□□□□ -1.3
PDCD4-209ENST00000489049 ZNF143P52747 638 aaPredicted RBP6.94□□□□□ -1.3
PDCD4-209ENST00000489049 PSMC1P62191 440 aaKnown RBP6.94□□□□□ -1.3
PDCD4-209ENST00000489049 ZNF252P-AS1Q0IIN9 211 aa6.94□□□□□ -1.3
PDCD4-209ENST00000489049 KLF1Q13351 362 aaPredicted RBP6.94□□□□□ -1.3
PDCD4-209ENST00000489049 BYSLQ13895 437 aaKnown RBP6.94□□□□□ -1.3
PDCD4-209ENST00000489049 TFDP2Q14188 446 aa6.94□□□□□ -1.3
PDCD4-209ENST00000489049 SNX17Q15036 470 aa6.94□□□□□ -1.3
PDCD4-209ENST00000489049 ARHGEF6Q15052 776 aa6.94□□□□□ -1.3
PDCD4-209ENST00000489049 PDK2Q15119 407 aa6.94□□□□□ -1.3
PDCD4-209ENST00000489049 SIX1Q15475 284 aaPredicted RBP6.94□□□□□ -1.3
PDCD4-209ENST00000489049 TAZQ16635 292 aa6.94□□□□□ -1.3
PDCD4-209ENST00000489049 SV2CQ496J9 727 aa6.94□□□□□ -1.3
PDCD4-209ENST00000489049 SEZ6Q53EL9 994 aa6.94□□□□□ -1.3
PDCD4-209ENST00000489049 FAM47CQ5HY64 1035 aa6.94□□□□□ -1.3
PDCD4-209ENST00000489049 GJC2Q5T442 439 aaPredicted RBP6.94□□□□□ -1.3
PDCD4-209ENST00000489049 DENND2CQ68D51 928 aa6.94□□□□□ -1.3
PDCD4-209ENST00000489049 LEKR1Q6ZMV7 388 aa6.94□□□□□ -1.3
PDCD4-209ENST00000489049 ZNF365Q70YC5 407 aa6.94□□□□□ -1.3
PDCD4-209ENST00000489049 ZNF771Q7L3S4 317 aaPredicted RBP6.94□□□□□ -1.3
PDCD4-209ENST00000489049 LIMS2Q7Z4I7 341 aa6.94□□□□□ -1.3
PDCD4-209ENST00000489049 PCGF5Q86SE9 256 aa6.94□□□□□ -1.3
PDCD4-209ENST00000489049 PSTKQ8IV42 348 aaKnown RBP6.94□□□□□ -1.3
PDCD4-209ENST00000489049 WDTC1Q8N5D0 677 aa6.94□□□□□ -1.3
PDCD4-209ENST00000489049 GPBAR1Q8TDU6 330 aa6.94□□□□□ -1.3
PDCD4-209ENST00000489049 TEKT4Q8WW24 435 aa6.94□□□□□ -1.3
PDCD4-209ENST00000489049 TMEM40Q8WWA1 233 aa6.94□□□□□ -1.3
PDCD4-209ENST00000489049 TFAP2BQ92481 460 aa6.94□□□□□ -1.3
PDCD4-209ENST00000489049 ART4Q93070 314 aa6.94□□□□□ -1.3
PDCD4-209ENST00000489049 PGM2Q96G03 612 aa6.94□□□□□ -1.3
PDCD4-209ENST00000489049 ATP6V1G3Q96LB4 118 aa6.94□□□□□ -1.3
PDCD4-209ENST00000489049 HSFY1Q96LI6 401 aa6.94□□□□□ -1.3
PDCD4-209ENST00000489049 HEXIM2Q96MH2 286 aaKnown RBP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms