RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 EXD1Q8NHP7 514 aa16.65■□□□□ 0.26
CLDN11-208ENST00000488989 ZNF592Q92610 1267 aa16.65■□□□□ 0.26
CLDN11-208ENST00000488989 PBKQ96KB5 322 aa16.65■□□□□ 0.26
CLDN11-208ENST00000488989 FCRL2Q96LA5 508 aaPredicted RBP16.65■□□□□ 0.26
CLDN11-208ENST00000488989 SNRNP25Q9BV90 132 aaKnown RBP16.65■□□□□ 0.26
CLDN11-208ENST00000488989 RNF38Q9H0F5 515 aa16.65■□□□□ 0.26
CLDN11-208ENST00000488989 ATXN3LQ9H3M9 355 aa16.65■□□□□ 0.26
CLDN11-208ENST00000488989 RRAGDQ9NQL2 400 aaPredicted RBP16.65■□□□□ 0.26
CLDN11-208ENST00000488989 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.65■□□□□ 0.26
CLDN11-208ENST00000488989 RASAL2Q9UJF2 1139 aa16.65■□□□□ 0.26
CLDN11-208ENST00000488989 FZD10Q9ULW2 581 aa16.65■□□□□ 0.26
CLDN11-208ENST00000488989 DOCK4Q8N1I0 1966 aa16.65■□□□□ 0.26
CLDN11-208ENST00000488989 DOCK8Q8NF50 2099 aa16.65■□□□□ 0.26
CLDN11-208ENST00000488989 A0A1W2PRU2 124 aa16.64■□□□□ 0.25
CLDN11-208ENST00000488989 KCNU1A8MYU2 1149 aa16.64■□□□□ 0.25
CLDN11-208ENST00000488989 MSI1O43347 362 aaKnown RBP16.64■□□□□ 0.25
CLDN11-208ENST00000488989 SLC2A3P11169 496 aa16.64■□□□□ 0.25
CLDN11-208ENST00000488989 CCR1P32246 355 aa16.64■□□□□ 0.25
CLDN11-208ENST00000488989 ADRA1BP35368 520 aa16.64■□□□□ 0.25
CLDN11-208ENST00000488989 TBX4P57082 545 aa16.64■□□□□ 0.25
CLDN11-208ENST00000488989 SLC7A9P82251 487 aa16.64■□□□□ 0.25
CLDN11-208ENST00000488989 CYP4F8P98187 520 aa16.64■□□□□ 0.25
CLDN11-208ENST00000488989 TUBB2AQ13885 445 aa16.64■□□□□ 0.25
CLDN11-208ENST00000488989 DPYSL2Q16555 572 aa16.64■□□□□ 0.25
CLDN11-208ENST00000488989 SLC5A9Q2M3M2 681 aa16.64■□□□□ 0.25
CLDN11-208ENST00000488989 TXNDC8Q6A555 127 aa16.64■□□□□ 0.25
CLDN11-208ENST00000488989 TMC5Q6UXY8 1006 aa16.64■□□□□ 0.25
CLDN11-208ENST00000488989 VSIG1Q86XK7 387 aa16.64■□□□□ 0.25
CLDN11-208ENST00000488989 TCEAL4Q96EI5 215 aa16.64■□□□□ 0.25
CLDN11-208ENST00000488989 GAS2L1Q99501 681 aaPredicted RBP16.64■□□□□ 0.25
CLDN11-208ENST00000488989 TUBB2BQ9BVA1 445 aa16.64■□□□□ 0.25
CLDN11-208ENST00000488989 KLF16Q9BXK1 252 aaPredicted RBP16.64■□□□□ 0.25
CLDN11-208ENST00000488989 WDCPQ9H6R7 721 aa16.64■□□□□ 0.25
CLDN11-208ENST00000488989 ZWILCHQ9H900 591 aa16.64■□□□□ 0.25
CLDN11-208ENST00000488989 PIDD1Q9HB75 910 aa16.64■□□□□ 0.25
CLDN11-208ENST00000488989 ANLNQ9NQW6 1124 aa16.64■□□□□ 0.25
CLDN11-208ENST00000488989 CLEC1BQ9P126 229 aa16.64■□□□□ 0.25
CLDN11-208ENST00000488989 BRWD1Q9NSI6 2320 aa16.64■□□□□ 0.25
CLDN11-208ENST00000488989 SYNJ2BP-COX16A0A087WUM0 186 aa16.63■□□□□ 0.25
CLDN11-208ENST00000488989 SLC12A8A0AV02 714 aa16.63■□□□□ 0.25
CLDN11-208ENST00000488989 I6L893 689 aaPredicted RBP16.63■□□□□ 0.25
CLDN11-208ENST00000488989 KCNK3O14649 394 aa16.63■□□□□ 0.25
CLDN11-208ENST00000488989 ZRANB2O95218 330 aaKnown RBP eCLIP16.63■□□□□ 0.25
CLDN11-208ENST00000488989 NTHL1P78549 312 aa16.63■□□□□ 0.25
CLDN11-208ENST00000488989 COG7P83436 770 aa16.63■□□□□ 0.25
CLDN11-208ENST00000488989 MTA1Q13330 715 aa16.63■□□□□ 0.25
CLDN11-208ENST00000488989 TAZQ16635 292 aa16.63■□□□□ 0.25
CLDN11-208ENST00000488989 SMTNL2Q2TAL5 461 aa16.63■□□□□ 0.25
CLDN11-208ENST00000488989 ARL13BQ3SXY8 428 aa16.63■□□□□ 0.25
CLDN11-208ENST00000488989 ZC3H12AQ5D1E8 599 aaKnown RBP16.63■□□□□ 0.25
CLDN11-208ENST00000488989 KCNT1Q5JUK3 1230 aa16.63■□□□□ 0.25
CLDN11-208ENST00000488989 RARS2Q5T160 578 aaKnown RBP16.63■□□□□ 0.25
CLDN11-208ENST00000488989 RCOR2Q8IZ40 523 aa16.63■□□□□ 0.25
CLDN11-208ENST00000488989 RASGEF1CQ8N431 466 aa16.63■□□□□ 0.25
CLDN11-208ENST00000488989 PLD4Q96BZ4 506 aa16.63■□□□□ 0.25
CLDN11-208ENST00000488989 RBM41Q96IZ5 413 aaKnown RBP16.63■□□□□ 0.25
CLDN11-208ENST00000488989 ZFRQ96KR1 1074 aaKnown RBP16.63■□□□□ 0.25
CLDN11-208ENST00000488989 SLC22A12Q96S37 553 aa16.63■□□□□ 0.25
CLDN11-208ENST00000488989 HAPLN3Q96S86 360 aa16.63■□□□□ 0.25
CLDN11-208ENST00000488989 TKTL2Q9H0I9 626 aa16.63■□□□□ 0.25
CLDN11-208ENST00000488989 S1PR5Q9H228 398 aa16.63■□□□□ 0.25
CLDN11-208ENST00000488989 TASP1Q9H6P5 420 aa16.63■□□□□ 0.25
CLDN11-208ENST00000488989 MTMR10Q9NXD2 777 aa16.63■□□□□ 0.25
CLDN11-208ENST00000488989 COX16Q9P0S2 106 aa16.63■□□□□ 0.25
CLDN11-208ENST00000488989 TTC7AQ9ULT0 858 aaPredicted RBP16.63■□□□□ 0.25
CLDN11-208ENST00000488989 AP4E1Q9UPM8 1137 aa16.63■□□□□ 0.25
CLDN11-208ENST00000488989 TRAV19A0A0A6YYK7 116 aa16.62■□□□□ 0.25
CLDN11-208ENST00000488989 C3orf70A6NLC5 250 aaPredicted RBP16.62■□□□□ 0.25
CLDN11-208ENST00000488989 ZNF487B1APH4 448 aa16.62■□□□□ 0.25
CLDN11-208ENST00000488989 TBX10O75333 385 aa16.62■□□□□ 0.25
CLDN11-208ENST00000488989 PYGMP11217 842 aa16.62■□□□□ 0.25
CLDN11-208ENST00000488989 GJA1P17302 382 aa16.62■□□□□ 0.25
CLDN11-208ENST00000488989 HDCP19113 662 aa16.62■□□□□ 0.25
CLDN11-208ENST00000488989 KDELR1P24390 212 aa16.62■□□□□ 0.25
CLDN11-208ENST00000488989 WEE1P30291 646 aa16.62■□□□□ 0.25
CLDN11-208ENST00000488989 PTPN7P35236 360 aa16.62■□□□□ 0.25
CLDN11-208ENST00000488989 GJC1P36383 396 aa16.62■□□□□ 0.25
CLDN11-208ENST00000488989 LTBRP36941 435 aa16.62■□□□□ 0.25
CLDN11-208ENST00000488989 DNA2P51530 1060 aa16.62■□□□□ 0.25
CLDN11-208ENST00000488989 COPS2P61201 443 aa16.62■□□□□ 0.25
CLDN11-208ENST00000488989 NRG1Q02297 640 aaPredicted RBP16.62■□□□□ 0.25
CLDN11-208ENST00000488989 ITIH3Q06033 890 aa16.62■□□□□ 0.25
CLDN11-208ENST00000488989 PDK2Q15119 407 aa16.62■□□□□ 0.25
CLDN11-208ENST00000488989 TEAD2Q15562 447 aa16.62■□□□□ 0.25
CLDN11-208ENST00000488989 PPP2R5EQ16537 467 aa16.62■□□□□ 0.25
CLDN11-208ENST00000488989 ARHGAP15Q53QZ3 475 aa16.62■□□□□ 0.25
CLDN11-208ENST00000488989 DNTTIP2Q5QJE6 756 aaKnown RBP16.62■□□□□ 0.25
CLDN11-208ENST00000488989 MIB1Q86YT6 1006 aa16.62■□□□□ 0.25
CLDN11-208ENST00000488989 ARL14EPQ8N8R7 260 aaPredicted RBP16.62■□□□□ 0.25
CLDN11-208ENST00000488989 COG1Q8WTW3 980 aa16.62■□□□□ 0.25
CLDN11-208ENST00000488989 RAPGEF5Q92565 580 aa16.62■□□□□ 0.25
CLDN11-208ENST00000488989 AZIN2Q96A70 460 aa16.62■□□□□ 0.25
CLDN11-208ENST00000488989 PABPC5Q96DU9 382 aaKnown RBP16.62■□□□□ 0.25
CLDN11-208ENST00000488989 PSMB7Q99436 277 aa16.62■□□□□ 0.25
CLDN11-208ENST00000488989 SLC46A2Q9BY10 475 aa16.62■□□□□ 0.25
CLDN11-208ENST00000488989 OSBPL2Q9H1P3 480 aa16.62■□□□□ 0.25
CLDN11-208ENST00000488989 ADAM7Q9H2U9 754 aa16.62■□□□□ 0.25
CLDN11-208ENST00000488989 TRPC7Q9HCX4 862 aa16.62■□□□□ 0.25
CLDN11-208ENST00000488989 RNF14Q9UBS8 474 aa16.62■□□□□ 0.25
CLDN11-208ENST00000488989 CDC23Q9UJX2 597 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms