RNA–Protein interactions for RNA: ENST00000488961.5

BEST3-205, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-205ENST00000488961 WDR49Q8IV35 697 aa7.91□□□□□ -1.14
BEST3-205ENST00000488961 RDM1Q8NG50 284 aa7.91□□□□□ -1.14
BEST3-205ENST00000488961 DEPDC1BQ8WUY9 529 aa7.91□□□□□ -1.14
BEST3-205ENST00000488961 SLC13A1Q9BZW2 595 aa7.91□□□□□ -1.14
BEST3-205ENST00000488961 RXFP1Q9HBX9 757 aa7.91□□□□□ -1.14
BEST3-205ENST00000488961 MAP3K20Q9NYL2 800 aaKnown RBP7.91□□□□□ -1.14
BEST3-205ENST00000488961 HESX1Q9UBX0 185 aa7.91□□□□□ -1.14
BEST3-205ENST00000488961 MARCOQ9UEW3 520 aaPredicted RBP7.91□□□□□ -1.14
BEST3-205ENST00000488961 TSC22D4Q9Y3Q8 395 aa7.91□□□□□ -1.14
BEST3-205ENST00000488961 STYXL1Q9Y6J8 313 aa7.91□□□□□ -1.14
BEST3-205ENST00000488961 CHD7Q9P2D1 2997 aa7.91□□□□□ -1.14
BEST3-205ENST00000488961 ACKR2O00590 384 aa7.91□□□□□ -1.14
BEST3-205ENST00000488961 KRT36O76013 467 aa7.91□□□□□ -1.14
BEST3-205ENST00000488961 CCNB1P14635 433 aa7.91□□□□□ -1.14
BEST3-205ENST00000488961 ITIH2P19823 946 aa7.91□□□□□ -1.14
BEST3-205ENST00000488961 KDELR1P24390 212 aa7.91□□□□□ -1.14
BEST3-205ENST00000488961 TBXAS1P24557 533 aaPredicted RBP7.91□□□□□ -1.14
BEST3-205ENST00000488961 ADRA1DP25100 572 aa7.91□□□□□ -1.14
BEST3-205ENST00000488961 NDUFV1P49821 464 aa7.91□□□□□ -1.14
BEST3-205ENST00000488961 ARFIP2P53365 341 aa7.91□□□□□ -1.14
BEST3-205ENST00000488961 ARHGAP1Q07960 439 aa7.91□□□□□ -1.14
BEST3-205ENST00000488961 SPARCL1Q14515 664 aa7.91□□□□□ -1.14
BEST3-205ENST00000488961 TFDP3Q5H9I0 405 aa7.91□□□□□ -1.14
BEST3-205ENST00000488961 RFWD3Q6PCD5 774 aa7.91□□□□□ -1.14
BEST3-205ENST00000488961 PPP1R21Q6ZMI0 780 aa7.91□□□□□ -1.14
BEST3-205ENST00000488961 PHF13Q86YI8 300 aaPredicted RBP7.91□□□□□ -1.14
BEST3-205ENST00000488961 KATNAL2Q8IYT4 538 aa7.91□□□□□ -1.14
BEST3-205ENST00000488961 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.91□□□□□ -1.14
BEST3-205ENST00000488961 DNAJB3Q8WWF6 145 aa7.91□□□□□ -1.14
BEST3-205ENST00000488961 RSPH1Q8WYR4 309 aa7.91□□□□□ -1.14
BEST3-205ENST00000488961 FAM149B1Q96BN6 582 aa7.91□□□□□ -1.14
BEST3-205ENST00000488961 CEP295NLQ96MC4 621 aa7.91□□□□□ -1.14
BEST3-205ENST00000488961 UNKQ9C0B0 810 aaKnown RBP7.91□□□□□ -1.14
BEST3-205ENST00000488961 ADARB2Q9NS39 739 aaKnown RBP7.91□□□□□ -1.14
BEST3-205ENST00000488961 DPP3Q9NY33 737 aa7.91□□□□□ -1.14
BEST3-205ENST00000488961 STOML1Q9UBI4 398 aa7.91□□□□□ -1.14
BEST3-205ENST00000488961 XPO7Q9UIA9 1087 aaKnown RBP7.91□□□□□ -1.14
BEST3-205ENST00000488961 USP18Q9UMW8 372 aa7.91□□□□□ -1.14
BEST3-205ENST00000488961 SNX10Q9Y5X0 201 aa7.91□□□□□ -1.14
BEST3-205ENST00000488961 NUMBLQ9Y6R0 609 aa7.91□□□□□ -1.14
BEST3-205ENST00000488961 REV3LO60673 3130 aa7.9□□□□□ -1.14
BEST3-205ENST00000488961 ATP8B3O60423 1300 aa7.9□□□□□ -1.14
BEST3-205ENST00000488961 CCL15-CCL14A0A0B4J2E2 113 aa7.9□□□□□ -1.14
BEST3-205ENST00000488961 KCNN4O15554 427 aa7.9□□□□□ -1.14
BEST3-205ENST00000488961 USP12O75317 370 aa7.9□□□□□ -1.14
BEST3-205ENST00000488961 APRTP07741 180 aa7.9□□□□□ -1.14
BEST3-205ENST00000488961 SMPD1P17405 629 aa7.9□□□□□ -1.14
BEST3-205ENST00000488961 EPHX2P34913 555 aa7.9□□□□□ -1.14
BEST3-205ENST00000488961 CLDN10P78369 228 aa7.9□□□□□ -1.14
BEST3-205ENST00000488961 KRT81Q14533 505 aa7.9□□□□□ -1.14
BEST3-205ENST00000488961 TTLL4Q14679 1199 aa7.9□□□□□ -1.14
BEST3-205ENST00000488961 TMEM132DQ14C87 1099 aa7.9□□□□□ -1.14
BEST3-205ENST00000488961 PPP2R5EQ16537 467 aa7.9□□□□□ -1.14
BEST3-205ENST00000488961 CCL15Q16663 113 aa7.9□□□□□ -1.14
BEST3-205ENST00000488961 KCTD21Q4G0X4 260 aa7.9□□□□□ -1.14
BEST3-205ENST00000488961 IL31Q6EBC2 164 aa7.9□□□□□ -1.14
BEST3-205ENST00000488961 CCDC62Q6P9F0 684 aa7.9□□□□□ -1.14
BEST3-205ENST00000488961 MARK2Q7KZI7 788 aaKnown RBP7.9□□□□□ -1.14
BEST3-205ENST00000488961 ENOSF1Q7L5Y1 443 aa7.9□□□□□ -1.14
BEST3-205ENST00000488961 CATSPER4Q7RTX7 472 aa7.9□□□□□ -1.14
BEST3-205ENST00000488961 SATL1Q86VE3 508 aa7.9□□□□□ -1.14
BEST3-205ENST00000488961 FAM131BQ86XD5 332 aa7.9□□□□□ -1.14
BEST3-205ENST00000488961 ERO1BQ86YB8 467 aa7.9□□□□□ -1.14
BEST3-205ENST00000488961 ANKRD13AQ8IZ07 590 aa7.9□□□□□ -1.14
BEST3-205ENST00000488961 SLC7A5P1Q8MH63 180 aa7.9□□□□□ -1.14
BEST3-205ENST00000488961 AGGF1Q8N302 714 aaeCLIP7.9□□□□□ -1.14
BEST3-205ENST00000488961 MPP5Q8N3R9 675 aa7.9□□□□□ -1.14
BEST3-205ENST00000488961 EXD1Q8NHP7 514 aa7.9□□□□□ -1.14
BEST3-205ENST00000488961 CPT1BQ92523 772 aa7.9□□□□□ -1.14
BEST3-205ENST00000488961 LPPQ93052 612 aa7.9□□□□□ -1.14
BEST3-205ENST00000488961 TRABDQ9H4I3 376 aa7.9□□□□□ -1.14
BEST3-205ENST00000488961 NPHS2Q9NP85 383 aa7.9□□□□□ -1.14
BEST3-205ENST00000488961 AVENQ9NQS1 362 aaPredicted RBP7.9□□□□□ -1.14
BEST3-205ENST00000488961 NUDT5Q9UKK9 219 aa7.9□□□□□ -1.14
BEST3-205ENST00000488961 TTLL3Q9Y4R7 772 aa7.9□□□□□ -1.14
BEST3-205ENST00000488961 MAD1L1Q9Y6D9 718 aa7.9□□□□□ -1.14
BEST3-205ENST00000488961 SCINQ9Y6U3 715 aa7.9□□□□□ -1.14
BEST3-205ENST00000488961 SPTBN5Q9NRC6 3674 aaKnown RBP7.9□□□□□ -1.14
BEST3-205ENST00000488961 CLUHO75153 1309 aa7.9□□□□□ -1.14
BEST3-205ENST00000488961 BTBD19C9JJ37 291 aa7.9□□□□□ -1.15
BEST3-205ENST00000488961 DNALI1O14645 258 aaPredicted RBP7.9□□□□□ -1.15
BEST3-205ENST00000488961 GABBR2O75899 941 aa7.9□□□□□ -1.15
BEST3-205ENST00000488961 PDE5AO76074 875 aa7.9□□□□□ -1.15
BEST3-205ENST00000488961 CBX6O95503 412 aa7.9□□□□□ -1.15
BEST3-205ENST00000488961 AGTP01019 485 aa7.9□□□□□ -1.15
BEST3-205ENST00000488961 RARBP10826 455 aa7.9□□□□□ -1.15
BEST3-205ENST00000488961 PORP16435 677 aaPredicted RBP7.9□□□□□ -1.15
BEST3-205ENST00000488961 CYP2B6P20813 491 aa7.9□□□□□ -1.15
BEST3-205ENST00000488961 RBL1P28749 1068 aa7.9□□□□□ -1.15
BEST3-205ENST00000488961 ICAM3P32942 547 aa7.9□□□□□ -1.15
BEST3-205ENST00000488961 ELK3P41970 407 aa7.9□□□□□ -1.15
BEST3-205ENST00000488961 GRIA2P42262 883 aa7.9□□□□□ -1.15
BEST3-205ENST00000488961 CPA2P48052 419 aa7.9□□□□□ -1.15
BEST3-205ENST00000488961 TUFMP49411 452 aaKnown RBP7.9□□□□□ -1.15
BEST3-205ENST00000488961 CDK7P50613 346 aa7.9□□□□□ -1.15
BEST3-205ENST00000488961 ZNF132P52740 706 aa7.9□□□□□ -1.15
BEST3-205ENST00000488961 EMP3P54852 163 aa7.9□□□□□ -1.15
BEST3-205ENST00000488961 SLC25A11Q02978 314 aaKnown RBP7.9□□□□□ -1.15
BEST3-205ENST00000488961 GBE1Q04446 702 aa7.9□□□□□ -1.15
BEST3-205ENST00000488961 C1QBPQ07021 282 aaKnown RBP7.9□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms