RNA–Protein interactions for RNA: ENST00000488923.1

HDLBP-243, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 582 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-243ENST00000488923 SSU72Q9NP77 194 aaKnown RBP6.88□□□□□ -1.31
HDLBP-243ENST00000488923 PNPLA8Q9NP80 782 aa6.88□□□□□ -1.31
HDLBP-243ENST00000488923 NMRK2Q9NPI5 230 aa6.88□□□□□ -1.31
HDLBP-243ENST00000488923 PPANQ9NQ55 473 aaKnown RBP6.88□□□□□ -1.31
HDLBP-243ENST00000488923 XPNPEP3Q9NQH7 507 aa6.88□□□□□ -1.31
HDLBP-243ENST00000488923 CNGB3Q9NQW8 809 aa6.88□□□□□ -1.31
HDLBP-243ENST00000488923 KLK14Q9P0G3 267 aa6.88□□□□□ -1.31
HDLBP-243ENST00000488923 SAMD15Q9P1V8 674 aa6.88□□□□□ -1.31
HDLBP-243ENST00000488923 ST3GAL5Q9UNP4 418 aa6.88□□□□□ -1.31
HDLBP-243ENST00000488923 RRP15Q9Y3B9 282 aaKnown RBP6.88□□□□□ -1.31
HDLBP-243ENST00000488923 A0A0U1RQF3 1178 aa6.87□□□□□ -1.31
HDLBP-243ENST00000488923 TRDMT1O14717 391 aaKnown RBP6.87□□□□□ -1.31
HDLBP-243ENST00000488923 CAPN9O14815 690 aa6.87□□□□□ -1.31
HDLBP-243ENST00000488923 PPP1R12AO14974 1030 aaPredicted RBP6.87□□□□□ -1.31
HDLBP-243ENST00000488923 NCAM2O15394 837 aa6.87□□□□□ -1.31
HDLBP-243ENST00000488923 SPINT1O43278 529 aa6.87□□□□□ -1.31
HDLBP-243ENST00000488923 MTSS1O43312 755 aa6.87□□□□□ -1.31
HDLBP-243ENST00000488923 ADAMTS4O75173 837 aa6.87□□□□□ -1.31
HDLBP-243ENST00000488923 GCATO75600 419 aa6.87□□□□□ -1.31
HDLBP-243ENST00000488923 ITGB2P05107 769 aa6.87□□□□□ -1.31
HDLBP-243ENST00000488923 CYP11A1P05108 521 aa6.87□□□□□ -1.31
HDLBP-243ENST00000488923 CELA2BP08218 269 aaPredicted RBP6.87□□□□□ -1.31
HDLBP-243ENST00000488923 PDGFRBP09619 1106 aa6.87□□□□□ -1.31
HDLBP-243ENST00000488923 CCDC130P13994 396 aa6.87□□□□□ -1.31
HDLBP-243ENST00000488923 BRAFP15056 766 aa6.87□□□□□ -1.31
HDLBP-243ENST00000488923 CYP2F1P24903 491 aa6.87□□□□□ -1.31
HDLBP-243ENST00000488923 STX2P32856 288 aa6.87□□□□□ -1.31
HDLBP-243ENST00000488923 CYP2C18P33260 490 aa6.87□□□□□ -1.31
HDLBP-243ENST00000488923 HTR7P34969 479 aa6.87□□□□□ -1.31
HDLBP-243ENST00000488923 FLT3LGP49771 235 aa6.87□□□□□ -1.31
HDLBP-243ENST00000488923 SULT1E1P49888 294 aa6.87□□□□□ -1.31
HDLBP-243ENST00000488923 GEMIN4P57678 1058 aaKnown RBP6.87□□□□□ -1.31
HDLBP-243ENST00000488923 CORO7P57737 925 aa6.87□□□□□ -1.31
HDLBP-243ENST00000488923 ZNF200P98182 395 aaPredicted RBP6.87□□□□□ -1.31
HDLBP-243ENST00000488923 IL9RQ01113 521 aa6.87□□□□□ -1.31
HDLBP-243ENST00000488923 MGAT3Q09327 533 aa6.87□□□□□ -1.31
HDLBP-243ENST00000488923 GRIK3Q13003 919 aa6.87□□□□□ -1.31
HDLBP-243ENST00000488923 ITIH4Q14624 930 aa6.87□□□□□ -1.31
HDLBP-243ENST00000488923 LONRF1Q17RB8 773 aa6.87□□□□□ -1.31
HDLBP-243ENST00000488923 SKIDA1Q1XH10 827 aa6.87□□□□□ -1.31
HDLBP-243ENST00000488923 C15orf59Q2T9L4 293 aaPredicted RBP6.87□□□□□ -1.31
HDLBP-243ENST00000488923 SLC45A4Q5BKX6 768 aa6.87□□□□□ -1.31
HDLBP-243ENST00000488923 EFHC2Q5JST6 749 aa6.87□□□□□ -1.31
HDLBP-243ENST00000488923 GDF6Q6KF10 455 aaPredicted RBP6.87□□□□□ -1.31
HDLBP-243ENST00000488923 CYP4F22Q6NT55 531 aa6.87□□□□□ -1.31
HDLBP-243ENST00000488923 CXCL17Q6UXB2 119 aa6.87□□□□□ -1.31
HDLBP-243ENST00000488923 CYP4V2Q6ZWL3 525 aaPredicted RBP6.87□□□□□ -1.31
HDLBP-243ENST00000488923 CCNJLQ8IV13 435 aa6.87□□□□□ -1.31
HDLBP-243ENST00000488923 PALM2Q8IXS6 379 aa6.87□□□□□ -1.31
HDLBP-243ENST00000488923 ZBED8Q8IZ13 594 aa6.87□□□□□ -1.31
HDLBP-243ENST00000488923 FUKQ8N0W3 1084 aa6.87□□□□□ -1.31
HDLBP-243ENST00000488923 VPS52Q8N1B4 723 aa6.87□□□□□ -1.31
HDLBP-243ENST00000488923 THEM5Q8N1Q8 247 aa6.87□□□□□ -1.31
HDLBP-243ENST00000488923 PLD5Q8N7P1 536 aa6.87□□□□□ -1.31
HDLBP-243ENST00000488923 FAM71DQ8N9W8 422 aa6.87□□□□□ -1.31
HDLBP-243ENST00000488923 CCDC197Q8NCU1 140 aa6.87□□□□□ -1.31
HDLBP-243ENST00000488923 SMC1BQ8NDV3 1235 aa6.87□□□□□ -1.31
HDLBP-243ENST00000488923 MCUQ8NE86 351 aa6.87□□□□□ -1.31
HDLBP-243ENST00000488923 KLHDC9Q8NEP7 349 aa6.87□□□□□ -1.31
HDLBP-243ENST00000488923 CPT1BQ92523 772 aa6.87□□□□□ -1.31
HDLBP-243ENST00000488923 NT5C3BQ969T7 300 aa6.87□□□□□ -1.31
HDLBP-243ENST00000488923 NTAN1Q96AB6 310 aa6.87□□□□□ -1.31
HDLBP-243ENST00000488923 LENG1Q96BZ8 264 aaPredicted RBP6.87□□□□□ -1.31
HDLBP-243ENST00000488923 ZBTB9Q96C00 473 aa6.87□□□□□ -1.31
HDLBP-243ENST00000488923 ACSF2Q96CM8 615 aaPredicted RBP6.87□□□□□ -1.31
HDLBP-243ENST00000488923 SMARCD1Q96GM5 515 aa6.87□□□□□ -1.31
HDLBP-243ENST00000488923 CABS1Q96KC9 395 aa6.87□□□□□ -1.31
HDLBP-243ENST00000488923 SLC2A13Q96QE2 648 aa6.87□□□□□ -1.31
HDLBP-243ENST00000488923 PEBP4Q96S96 227 aa6.87□□□□□ -1.31
HDLBP-243ENST00000488923 SMC6Q96SB8 1091 aa6.87□□□□□ -1.31
HDLBP-243ENST00000488923 CYTH2Q99418 400 aa6.87□□□□□ -1.31
HDLBP-243ENST00000488923 NPY6RQ99463 290 aa6.87□□□□□ -1.31
HDLBP-243ENST00000488923 FAM118BQ9BPY3 351 aa6.87□□□□□ -1.31
HDLBP-243ENST00000488923 SYT15Q9BQS2 421 aa6.87□□□□□ -1.31
HDLBP-243ENST00000488923 ACBD6Q9BR61 282 aa6.87□□□□□ -1.31
HDLBP-243ENST00000488923 DHX35Q9H5Z1 703 aaKnown RBP6.87□□□□□ -1.31
HDLBP-243ENST00000488923 NRDE2Q9H7Z3 1164 aa6.87□□□□□ -1.31
HDLBP-243ENST00000488923 ACTR5Q9H9F9 607 aaPredicted RBP6.87□□□□□ -1.31
HDLBP-243ENST00000488923 VPS37BQ9H9H4 285 aa6.87□□□□□ -1.31
HDLBP-243ENST00000488923 XAB2Q9HCS7 855 aaKnown RBP6.87□□□□□ -1.31
HDLBP-243ENST00000488923 DDX43Q9NXZ2 648 aaKnown RBP6.87□□□□□ -1.31
HDLBP-243ENST00000488923 PSMC3IPQ9P2W1 217 aaPredicted RBP6.87□□□□□ -1.31
HDLBP-243ENST00000488923 XPO7Q9UIA9 1087 aaKnown RBP6.87□□□□□ -1.31
HDLBP-243ENST00000488923 ABT1Q9ULW3 272 aaKnown RBP6.87□□□□□ -1.31
HDLBP-243ENST00000488923 AP4E1Q9UPM8 1137 aa6.87□□□□□ -1.31
HDLBP-243ENST00000488923 NAALADL1Q9UQQ1 740 aa6.87□□□□□ -1.31
HDLBP-243ENST00000488923 NOD1Q9Y239 953 aa6.87□□□□□ -1.31
HDLBP-243ENST00000488923 IKBKGQ9Y6K9 419 aa6.87□□□□□ -1.31
HDLBP-243ENST00000488923 TRPM7Q96QT4 1865 aa6.87□□□□□ -1.31
HDLBP-243ENST00000488923 EVPLQ92817 2033 aa6.86□□□□□ -1.31
HDLBP-243ENST00000488923 IQANK1A0A1B0GTG1 560 aa6.86□□□□□ -1.31
HDLBP-243ENST00000488923 TMEM120BA0PK00 339 aa6.86□□□□□ -1.31
HDLBP-243ENST00000488923 ARL5CA6NH57 179 aa6.86□□□□□ -1.31
HDLBP-243ENST00000488923 FAM47DPA6NHR8 397 aa6.86□□□□□ -1.31
HDLBP-243ENST00000488923 TMEM88BA6NKF7 163 aa6.86□□□□□ -1.31
HDLBP-243ENST00000488923 DCDC2CA8MYV0 355 aa6.86□□□□□ -1.31
HDLBP-243ENST00000488923 RASA4BC9J798 803 aa6.86□□□□□ -1.31
HDLBP-243ENST00000488923 AP3B1O00203 1094 aa6.86□□□□□ -1.31
HDLBP-243ENST00000488923 INPPL1O15357 1258 aa6.86□□□□□ -1.31
HDLBP-243ENST00000488923 KCNN4O15554 427 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms