RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 TLR6Q9Y2C9 796 aa12.82□□□□□ -0.36
TRAIP-209ENST00000488860 SH3BP1Q9Y3L3 701 aa12.82□□□□□ -0.36
TRAIP-209ENST00000488860 HBS1LQ9Y450 684 aaKnown RBP12.82□□□□□ -0.36
TRAIP-209ENST00000488860 LEFTY2O00292 366 aa12.81□□□□□ -0.36
TRAIP-209ENST00000488860 LRCH4O75427 683 aa12.81□□□□□ -0.36
TRAIP-209ENST00000488860 F9P00740 461 aa12.81□□□□□ -0.36
TRAIP-209ENST00000488860 COMTP21964 271 aa12.81□□□□□ -0.36
TRAIP-209ENST00000488860 CORO1AP31146 461 aaKnown RBP12.81□□□□□ -0.36
TRAIP-209ENST00000488860 MAN1A1P33908 653 aa12.81□□□□□ -0.36
TRAIP-209ENST00000488860 KCNQ1P51787 676 aa12.81□□□□□ -0.36
TRAIP-209ENST00000488860 HDAC4P56524 1084 aa12.81□□□□□ -0.36
TRAIP-209ENST00000488860 ZC3H12AQ5D1E8 599 aaKnown RBP12.81□□□□□ -0.36
TRAIP-209ENST00000488860 FAM78AQ5JUQ0 283 aa12.81□□□□□ -0.36
TRAIP-209ENST00000488860 CC2D1AQ6P1N0 951 aaPredicted RBP12.81□□□□□ -0.36
TRAIP-209ENST00000488860 POTEHQ6S545 545 aa12.81□□□□□ -0.36
TRAIP-209ENST00000488860 ARID3BQ8IVW6 561 aaPredicted RBP12.81□□□□□ -0.36
TRAIP-209ENST00000488860 NIPA2Q8N8Q9 360 aa12.81□□□□□ -0.36
TRAIP-209ENST00000488860 TDRD5Q8NAT2 981 aaKnown RBP12.81□□□□□ -0.36
TRAIP-209ENST00000488860 SH3RF2Q8TEC5 729 aa12.81□□□□□ -0.36
TRAIP-209ENST00000488860 NT5C3BQ969T7 300 aa12.81□□□□□ -0.36
TRAIP-209ENST00000488860 PLD4Q96BZ4 506 aa12.81□□□□□ -0.36
TRAIP-209ENST00000488860 PGAP3Q96FM1 320 aaPredicted RBP12.81□□□□□ -0.36
TRAIP-209ENST00000488860 ZFRQ96KR1 1074 aaKnown RBP12.81□□□□□ -0.36
TRAIP-209ENST00000488860 CALR3Q96L12 384 aaKnown RBP12.81□□□□□ -0.36
TRAIP-209ENST00000488860 FCRL2Q96LA5 508 aaPredicted RBP12.81□□□□□ -0.36
TRAIP-209ENST00000488860 KLF16Q9BXK1 252 aaPredicted RBP12.81□□□□□ -0.36
TRAIP-209ENST00000488860 IRX2Q9BZI1 471 aaPredicted RBP12.81□□□□□ -0.36
TRAIP-209ENST00000488860 ZWILCHQ9H900 591 aa12.81□□□□□ -0.36
TRAIP-209ENST00000488860 TDP1Q9NUW8 608 aa12.81□□□□□ -0.36
TRAIP-209ENST00000488860 GDE1Q9NZC3 331 aa12.81□□□□□ -0.36
TRAIP-209ENST00000488860 CFAP97Q9P2B7 532 aa12.81□□□□□ -0.36
TRAIP-209ENST00000488860 PCSK1NQ9UHG2 260 aa12.81□□□□□ -0.36
TRAIP-209ENST00000488860 LSM7Q9UK45 103 aaKnown RBP12.81□□□□□ -0.36
TRAIP-209ENST00000488860 ARHGAP26Q9UNA1 814 aa12.81□□□□□ -0.36
TRAIP-209ENST00000488860 MIA3Q5JRA6 1907 aa12.8□□□□□ -0.36
TRAIP-209ENST00000488860 TICRRQ7Z2Z1 1910 aa12.8□□□□□ -0.36
TRAIP-209ENST00000488860 TCF20Q9UGU0 1960 aaKnown RBP12.8□□□□□ -0.36
TRAIP-209ENST00000488860 SOBPA7XYQ1 873 aa12.8□□□□□ -0.36
TRAIP-209ENST00000488860 PRPSAP2O60256 369 aa12.8□□□□□ -0.36
TRAIP-209ENST00000488860 KIF5CO60282 957 aa12.8□□□□□ -0.36
TRAIP-209ENST00000488860 STC2O76061 302 aa12.8□□□□□ -0.36
TRAIP-209ENST00000488860 FTCDO95954 541 aa12.8□□□□□ -0.36
TRAIP-209ENST00000488860 TCF4P15884 667 aa12.8□□□□□ -0.36
TRAIP-209ENST00000488860 MIPP30301 263 aa12.8□□□□□ -0.36
TRAIP-209ENST00000488860 CCR1P32246 355 aa12.8□□□□□ -0.36
TRAIP-209ENST00000488860 KPNA1P52294 538 aaPredicted RBP12.8□□□□□ -0.36
TRAIP-209ENST00000488860 COG7P83436 770 aa12.8□□□□□ -0.36
TRAIP-209ENST00000488860 USP4Q13107 963 aa12.8□□□□□ -0.36
TRAIP-209ENST00000488860 NNTQ13423 1086 aa12.8□□□□□ -0.36
TRAIP-209ENST00000488860 ACAP1Q15027 740 aa12.8□□□□□ -0.36
TRAIP-209ENST00000488860 HADHQ16836 314 aaKnown RBP12.8□□□□□ -0.36
TRAIP-209ENST00000488860 SMTNL2Q2TAL5 461 aa12.8□□□□□ -0.36
TRAIP-209ENST00000488860 ZFYVE27Q5T4F4 411 aa12.8□□□□□ -0.36
TRAIP-209ENST00000488860 OTOP3Q7RTS5 596 aa12.8□□□□□ -0.36
TRAIP-209ENST00000488860 DDX42Q86XP3 938 aaKnown RBP eCLIP12.8□□□□□ -0.36
TRAIP-209ENST00000488860 SYCE1Q8N0S2 351 aa12.8□□□□□ -0.36
TRAIP-209ENST00000488860 RNF10Q8N5U6 811 aaKnown RBP12.8□□□□□ -0.36
TRAIP-209ENST00000488860 CCDC185Q8N715 623 aa12.8□□□□□ -0.36
TRAIP-209ENST00000488860 CENPIQ92674 756 aaPredicted RBP12.8□□□□□ -0.36
TRAIP-209ENST00000488860 SMARCD2Q92925 531 aa12.8□□□□□ -0.36
TRAIP-209ENST00000488860 USP13Q92995 863 aaPredicted RBP12.8□□□□□ -0.36
TRAIP-209ENST00000488860 WBP2Q969T9 261 aa12.8□□□□□ -0.36
TRAIP-209ENST00000488860 ACSF2Q96CM8 615 aaPredicted RBP12.8□□□□□ -0.36
TRAIP-209ENST00000488860 ASB16Q96NS5 453 aa12.8□□□□□ -0.36
TRAIP-209ENST00000488860 PEBP4Q96S96 227 aa12.8□□□□□ -0.36
TRAIP-209ENST00000488860 TKTL2Q9H0I9 626 aa12.8□□□□□ -0.36
TRAIP-209ENST00000488860 WDCPQ9H6R7 721 aa12.8□□□□□ -0.36
TRAIP-209ENST00000488860 TMPRSS4Q9NRS4 437 aa12.8□□□□□ -0.36
TRAIP-209ENST00000488860 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.8□□□□□ -0.36
TRAIP-209ENST00000488860 THEGQ9P2T0 379 aa12.8□□□□□ -0.36
TRAIP-209ENST00000488860 USP18Q9UMW8 372 aa12.8□□□□□ -0.36
TRAIP-209ENST00000488860 FAM50BQ9Y247 325 aa12.8□□□□□ -0.36
TRAIP-209ENST00000488860 DOCK4Q8N1I0 1966 aa12.8□□□□□ -0.36
TRAIP-209ENST00000488860 MYOFQ9NZM1 2061 aa12.79□□□□□ -0.36
TRAIP-209ENST00000488860 C2CD4DB7Z1M9 353 aa12.79□□□□□ -0.36
TRAIP-209ENST00000488860 ENDOD1O94919 500 aa12.79□□□□□ -0.36
TRAIP-209ENST00000488860 IGLV3-27P01718 113 aa12.79□□□□□ -0.36
TRAIP-209ENST00000488860 IL9P15248 144 aa12.79□□□□□ -0.36
TRAIP-209ENST00000488860 MSNP26038 577 aaKnown RBP12.79□□□□□ -0.36
TRAIP-209ENST00000488860 PCK1P35558 622 aa12.79□□□□□ -0.36
TRAIP-209ENST00000488860 GGCXP38435 758 aa12.79□□□□□ -0.36
TRAIP-209ENST00000488860 VIPR2P41587 438 aa12.79□□□□□ -0.36
TRAIP-209ENST00000488860 SLC1A1P43005 524 aa12.79□□□□□ -0.36
TRAIP-209ENST00000488860 HARS2P49590 506 aaKnown RBP12.79□□□□□ -0.36
TRAIP-209ENST00000488860 CXCR3P49682 368 aa12.79□□□□□ -0.36
TRAIP-209ENST00000488860 DNA2P51530 1060 aa12.79□□□□□ -0.36
TRAIP-209ENST00000488860 TAS2R40P59535 323 aa12.79□□□□□ -0.36
TRAIP-209ENST00000488860 ZXDBP98169 803 aa12.79□□□□□ -0.36
TRAIP-209ENST00000488860 ZNF77Q15935 545 aa12.79□□□□□ -0.36
TRAIP-209ENST00000488860 ZNF569Q5MCW4 686 aa12.79□□□□□ -0.36
TRAIP-209ENST00000488860 BRMS1LQ5PSV4 323 aa12.79□□□□□ -0.36
TRAIP-209ENST00000488860 NUGGCQ68CJ6 796 aa12.79□□□□□ -0.36
TRAIP-209ENST00000488860 PEX26Q7Z412 305 aa12.79□□□□□ -0.36
TRAIP-209ENST00000488860 BNIPLQ7Z465 357 aa12.79□□□□□ -0.36
TRAIP-209ENST00000488860 DENND1CQ8IV53 801 aa12.79□□□□□ -0.36
TRAIP-209ENST00000488860 ARFGAP1Q8N6T3 406 aa12.79□□□□□ -0.36
TRAIP-209ENST00000488860 CELF5Q8N6W0 485 aaKnown RBP12.79□□□□□ -0.36
TRAIP-209ENST00000488860 ATP6V0D2Q8N8Y2 350 aa12.79□□□□□ -0.36
TRAIP-209ENST00000488860 LRRC57Q8N9N7 239 aa12.79□□□□□ -0.36
TRAIP-209ENST00000488860 ADAMTS19Q8TE59 1207 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms