RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 NELL2Q99435 816 aa19.44■□□□□ 0.7
PTCD3-217ENST00000488801 DNAJC7Q99615 494 aa19.44■□□□□ 0.7
PTCD3-217ENST00000488801 C11orf70Q9BRQ4 267 aa19.44■□□□□ 0.7
PTCD3-217ENST00000488801 SPHK2Q9NRA0 654 aa19.44■□□□□ 0.7
PTCD3-217ENST00000488801 AGO1Q9UL18 857 aaKnown RBP19.44■□□□□ 0.7
PTCD3-217ENST00000488801 TLR6Q9Y2C9 796 aa19.44■□□□□ 0.7
PTCD3-217ENST00000488801 LUC7L2Q9Y383 392 aaKnown RBP19.44■□□□□ 0.7
PTCD3-217ENST00000488801 PLXND1Q9Y4D7 1925 aa19.43■□□□□ 0.7
PTCD3-217ENST00000488801 GRAP2O75791 330 aa19.43■□□□□ 0.7
PTCD3-217ENST00000488801 TRUB2O95900 331 aaKnown RBP19.43■□□□□ 0.7
PTCD3-217ENST00000488801 ADH1CP00326 375 aa19.43■□□□□ 0.7
PTCD3-217ENST00000488801 AVPR2P30518 371 aa19.43■□□□□ 0.7
PTCD3-217ENST00000488801 EIF2DP41214 584 aaKnown RBP19.43■□□□□ 0.7
PTCD3-217ENST00000488801 MATKP42679 507 aa19.43■□□□□ 0.7
PTCD3-217ENST00000488801 NSFP46459 744 aaKnown RBP19.43■□□□□ 0.7
PTCD3-217ENST00000488801 RPS9P46781 194 aaKnown RBP19.43■□□□□ 0.7
PTCD3-217ENST00000488801 C1QBPQ07021 282 aaKnown RBP19.43■□□□□ 0.7
PTCD3-217ENST00000488801 KLHL30Q0D2K2 578 aa19.43■□□□□ 0.7
PTCD3-217ENST00000488801 TBX2Q13207 712 aaPredicted RBP19.43■□□□□ 0.7
PTCD3-217ENST00000488801 NUGGCQ68CJ6 796 aa19.43■□□□□ 0.7
PTCD3-217ENST00000488801 RNF43Q68DV7 783 aa19.43■□□□□ 0.7
PTCD3-217ENST00000488801 SUGP1Q8IWZ8 645 aaKnown RBP19.43■□□□□ 0.7
PTCD3-217ENST00000488801 PHTF2Q8N3S3 785 aa19.43■□□□□ 0.7
PTCD3-217ENST00000488801 AZIN2Q96A70 460 aa19.43■□□□□ 0.7
PTCD3-217ENST00000488801 NPY6RQ99463 290 aa19.43■□□□□ 0.7
PTCD3-217ENST00000488801 TAS2R14Q9NYV8 317 aa19.43■□□□□ 0.7
PTCD3-217ENST00000488801 CALCOCO1Q9P1Z2 691 aa19.43■□□□□ 0.7
PTCD3-217ENST00000488801 MRPS17Q9Y2R5 130 aaKnown RBP19.43■□□□□ 0.7
PTCD3-217ENST00000488801 SPAG17Q6Q759 2223 aa19.43■□□□□ 0.7
PTCD3-217ENST00000488801 DDX3XO00571 662 aaKnown RBP eCLIP19.42■□□□□ 0.76e-15■■■■□ 25.2
PTCD3-217ENST00000488801 HMBSP08397 361 aa19.42■□□□□ 0.7
PTCD3-217ENST00000488801 CHRM1P11229 460 aaPredicted RBP19.42■□□□□ 0.7
PTCD3-217ENST00000488801 CHRNB1P11230 501 aa19.42■□□□□ 0.7
PTCD3-217ENST00000488801 ADH5P11766 374 aa19.42■□□□□ 0.7
PTCD3-217ENST00000488801 GZMAP12544 262 aa19.42■□□□□ 0.7
PTCD3-217ENST00000488801 NOS2P35228 1153 aa19.42■□□□□ 0.7
PTCD3-217ENST00000488801 FLT3P36888 993 aa19.42■□□□□ 0.7
PTCD3-217ENST00000488801 TBX4P57082 545 aa19.42■□□□□ 0.7
PTCD3-217ENST00000488801 NR1H3Q13133 447 aa19.42■□□□□ 0.7
PTCD3-217ENST00000488801 DCAF6Q58WW2 860 aa19.42■□□□□ 0.7
PTCD3-217ENST00000488801 FAM102AQ5T9C2 384 aaPredicted RBP19.42■□□□□ 0.7
PTCD3-217ENST00000488801 FSTL4Q6MZW2 842 aa19.42■□□□□ 0.7
PTCD3-217ENST00000488801 C12orf40Q86WS4 652 aa19.42■□□□□ 0.7
PTCD3-217ENST00000488801 DENND1CQ8IV53 801 aa19.42■□□□□ 0.7
PTCD3-217ENST00000488801 ADAM32Q8TC27 787 aa19.42■□□□□ 0.7
PTCD3-217ENST00000488801 EZH1Q92800 747 aaPredicted RBP19.42■□□□□ 0.7
PTCD3-217ENST00000488801 PGAP3Q96FM1 320 aaPredicted RBP19.42■□□□□ 0.7
PTCD3-217ENST00000488801 RRN3Q9NYV6 651 aa19.42■□□□□ 0.7
PTCD3-217ENST00000488801 WDR35Q9P2L0 1181 aa19.42■□□□□ 0.7
PTCD3-217ENST00000488801 NENFQ9UMX5 172 aa19.42■□□□□ 0.7
PTCD3-217ENST00000488801 SIT1Q9Y3P8 196 aa19.42■□□□□ 0.7
PTCD3-217ENST00000488801 BZW2Q9Y6E2 419 aaKnown RBP19.42■□□□□ 0.7
PTCD3-217ENST00000488801 FAM170AA1A519 330 aa19.41■□□□□ 0.7
PTCD3-217ENST00000488801 CAPN9O14815 690 aa19.41■□□□□ 0.7
PTCD3-217ENST00000488801 CACNG3O60359 315 aa19.41■□□□□ 0.7
PTCD3-217ENST00000488801 PENKP01210 267 aaPredicted RBP19.41■□□□□ 0.7
PTCD3-217ENST00000488801 CALB1P05937 261 aa19.41■□□□□ 0.7
PTCD3-217ENST00000488801 SKILP12757 684 aa19.41■□□□□ 0.7
PTCD3-217ENST00000488801 MAGEA9P43362 315 aa19.41■□□□□ 0.7
PTCD3-217ENST00000488801 AMPD2Q01433 879 aa19.41■□□□□ 0.7
PTCD3-217ENST00000488801 UBXN2BQ14CS0 331 aa19.41■□□□□ 0.7
PTCD3-217ENST00000488801 PON2Q15165 354 aa19.41■□□□□ 0.7
PTCD3-217ENST00000488801 FAM133BQ5BKY9 247 aaKnown RBP19.41■□□□□ 0.7
PTCD3-217ENST00000488801 ACAD10Q6JQN1 1059 aa19.41■□□□□ 0.7
PTCD3-217ENST00000488801 PPP1R2P3Q6NXS1 205 aa19.41■□□□□ 0.7
PTCD3-217ENST00000488801 WDR59Q6PJI9 974 aa19.41■□□□□ 0.7
PTCD3-217ENST00000488801 TMEM25Q86YD3 366 aa19.41■□□□□ 0.7
PTCD3-217ENST00000488801 DRC7Q8IY82 874 aa19.41■□□□□ 0.7
PTCD3-217ENST00000488801 C3orf20Q8ND61 904 aa19.41■□□□□ 0.7
PTCD3-217ENST00000488801 VCPIP1Q96JH7 1222 aa19.41■□□□□ 0.7
PTCD3-217ENST00000488801 FBRSL1Q9HCM7 1045 aaKnown RBP19.41■□□□□ 0.7
PTCD3-217ENST00000488801 ADAM22Q9P0K1 906 aa19.41■□□□□ 0.7
PTCD3-217ENST00000488801 FAM170BA6NMN3 283 aa19.4■□□□□ 0.7
PTCD3-217ENST00000488801 MFAP3LO75121 409 aa19.4■□□□□ 0.7
PTCD3-217ENST00000488801 SERPING1P05155 500 aa19.4■□□□□ 0.7
PTCD3-217ENST00000488801 PLEKP08567 350 aaPredicted RBP19.4■□□□□ 0.7
PTCD3-217ENST00000488801 TFE3P19532 575 aaPredicted RBP19.4■□□□□ 0.7
PTCD3-217ENST00000488801 TNFAIP3P21580 790 aa19.4■□□□□ 0.7
PTCD3-217ENST00000488801 CHKAP35790 457 aa19.4■□□□□ 0.7
PTCD3-217ENST00000488801 HARS2P49590 506 aaKnown RBP19.4■□□□□ 0.7
PTCD3-217ENST00000488801 NUBP1P53384 320 aa19.4■□□□□ 0.7
PTCD3-217ENST00000488801 CDK17Q00537 523 aa19.4■□□□□ 0.7
PTCD3-217ENST00000488801 GAD2Q05329 585 aa19.4■□□□□ 0.7
PTCD3-217ENST00000488801 MESP2Q0VG99 397 aa19.4■□□□□ 0.7
PTCD3-217ENST00000488801 PPP1R15BQ5SWA1 713 aa19.4■□□□□ 0.7
PTCD3-217ENST00000488801 FYB2Q5VWT5 728 aa19.4■□□□□ 0.7
PTCD3-217ENST00000488801 NADSYN1Q6IA69 706 aa19.4■□□□□ 0.7
PTCD3-217ENST00000488801 UNC45BQ8IWX7 931 aa19.4■□□□□ 0.7
PTCD3-217ENST00000488801 MCOLN2Q8IZK6 566 aa19.4■□□□□ 0.7
PTCD3-217ENST00000488801 CPLX3Q8WVH0 158 aa19.4■□□□□ 0.7
PTCD3-217ENST00000488801 CD101Q93033 1021 aa19.4■□□□□ 0.7
PTCD3-217ENST00000488801 MRFAP1L1Q96HT8 127 aa19.4■□□□□ 0.7
PTCD3-217ENST00000488801 P2RY13Q9BPV8 354 aa19.4■□□□□ 0.7
PTCD3-217ENST00000488801 IRX2Q9BZI1 471 aaPredicted RBP19.4■□□□□ 0.7
PTCD3-217ENST00000488801 TRIM5Q9C035 493 aa19.4■□□□□ 0.7
PTCD3-217ENST00000488801 CHRDQ9H2X0 955 aa19.4■□□□□ 0.7
PTCD3-217ENST00000488801 METTL5Q9NRN9 209 aaKnown RBP19.4■□□□□ 0.7
PTCD3-217ENST00000488801 SEPT11Q9NVA2 429 aaKnown RBP19.4■□□□□ 0.7
PTCD3-217ENST00000488801 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.4■□□□□ 0.7
PTCD3-217ENST00000488801 ARHGAP20Q9P2F6 1191 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms