RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 CEP250Q9BV73 2442 aa18.51■□□□□ 0.55
ITGB1-215ENST00000488494 E5RJQ4 531 aa18.51■□□□□ 0.55
ITGB1-215ENST00000488494 SART1O43290 800 aaKnown RBP18.51■□□□□ 0.55
ITGB1-215ENST00000488494 CISD3P0C7P0 127 aa18.51■□□□□ 0.55
ITGB1-215ENST00000488494 HOXB2P14652 356 aa18.51■□□□□ 0.55
ITGB1-215ENST00000488494 GBP1P32455 592 aa18.51■□□□□ 0.55
ITGB1-215ENST00000488494 WASP42768 502 aa18.51■□□□□ 0.55
ITGB1-215ENST00000488494 ACADSBP45954 432 aa18.51■□□□□ 0.55
ITGB1-215ENST00000488494 ID4P47928 161 aa18.51■□□□□ 0.55
ITGB1-215ENST00000488494 RPL34P49207 117 aaKnown RBP18.51■□□□□ 0.55
ITGB1-215ENST00000488494 LMNB2Q03252 620 aa18.51■□□□□ 0.55
ITGB1-215ENST00000488494 PDCLQ13371 301 aa18.51■□□□□ 0.55
ITGB1-215ENST00000488494 TCP11X2Q5H9J9 407 aa18.51■□□□□ 0.55
ITGB1-215ENST00000488494 PASD1Q8IV76 773 aa18.51■□□□□ 0.55
ITGB1-215ENST00000488494 SCUBE3Q8IX30 993 aa18.51■□□□□ 0.55
ITGB1-215ENST00000488494 CHPFQ8IZ52 775 aa18.51■□□□□ 0.55
ITGB1-215ENST00000488494 ACOX2Q99424 681 aa18.51■□□□□ 0.55
ITGB1-215ENST00000488494 TAB2Q9NYJ8 693 aa18.51■□□□□ 0.55
ITGB1-215ENST00000488494 DNAJC12Q9UKB3 198 aa18.51■□□□□ 0.55
ITGB1-215ENST00000488494 STARD13Q9Y3M8 1113 aa18.51■□□□□ 0.55
ITGB1-215ENST00000488494 TSPAN3O60637 253 aa18.5■□□□□ 0.55
ITGB1-215ENST00000488494 LRP3O75074 770 aa18.5■□□□□ 0.55
ITGB1-215ENST00000488494 EPN2O95208 641 aa18.5■□□□□ 0.55
ITGB1-215ENST00000488494 IGLV3-27P01718 113 aa18.5■□□□□ 0.55
ITGB1-215ENST00000488494 FYNP06241 537 aa18.5■□□□□ 0.55
ITGB1-215ENST00000488494 NCAM1P13591 858 aa18.5■□□□□ 0.55
ITGB1-215ENST00000488494 EEF1GP26641 437 aaKnown RBP18.5■□□□□ 0.55
ITGB1-215ENST00000488494 NTSR1P30989 418 aa18.5■□□□□ 0.55
ITGB1-215ENST00000488494 ELF2Q15723 593 aa18.5■□□□□ 0.55
ITGB1-215ENST00000488494 PLK5Q496M5 336 aa18.5■□□□□ 0.55
ITGB1-215ENST00000488494 USP39Q53GS9 565 aaKnown RBP18.5■□□□□ 0.55
ITGB1-215ENST00000488494 CT47A1Q5JQC4 288 aaPredicted RBP18.5■□□□□ 0.55
ITGB1-215ENST00000488494 DQX1Q8TE96 717 aaKnown RBP18.5■□□□□ 0.55
ITGB1-215ENST00000488494 DDI1Q8WTU0 396 aa18.5■□□□□ 0.55
ITGB1-215ENST00000488494 STK32AQ8WU08 396 aa18.5■□□□□ 0.55
ITGB1-215ENST00000488494 ERLEC1Q96DZ1 483 aa18.5■□□□□ 0.55
ITGB1-215ENST00000488494 SLC4A5Q9BY07 1137 aa18.5■□□□□ 0.55
ITGB1-215ENST00000488494 SEMA4GQ9NTN9 838 aa18.5■□□□□ 0.55
ITGB1-215ENST00000488494 FBXO10Q9UK96 956 aa18.5■□□□□ 0.55
ITGB1-215ENST00000488494 SLC27A6Q9Y2P4 619 aa18.5■□□□□ 0.55
ITGB1-215ENST00000488494 PAPSS1O43252 624 aaPredicted RBP18.49■□□□□ 0.55
ITGB1-215ENST00000488494 LATS1O95835 1130 aa18.49■□□□□ 0.55
ITGB1-215ENST00000488494 HOXD9P28356 352 aaPredicted RBP18.49■□□□□ 0.55
ITGB1-215ENST00000488494 RAPGEF1Q13905 1077 aa18.49■□□□□ 0.55
ITGB1-215ENST00000488494 CCDC6Q16204 474 aa18.49■□□□□ 0.55
ITGB1-215ENST00000488494 GEN1Q17RS7 908 aa18.49■□□□□ 0.55
ITGB1-215ENST00000488494 NUGGCQ68CJ6 796 aa18.49■□□□□ 0.55
ITGB1-215ENST00000488494 ANKS1BQ7Z6G8 1248 aa18.49■□□□□ 0.55
ITGB1-215ENST00000488494 TAC4Q86UU9 113 aa18.49■□□□□ 0.55
ITGB1-215ENST00000488494 LOXL4Q96JB6 756 aa18.49■□□□□ 0.55
ITGB1-215ENST00000488494 ZC3H10Q96K80 434 aaKnown RBP18.49■□□□□ 0.55
ITGB1-215ENST00000488494 LSM14BQ9BX40 385 aaKnown RBP18.49■□□□□ 0.55
ITGB1-215ENST00000488494 DUSP15Q9H1R2 295 aaPredicted RBP18.49■□□□□ 0.55
ITGB1-215ENST00000488494 CACNA2D2Q9NY47 1150 aa18.49■□□□□ 0.55
ITGB1-215ENST00000488494 TJP2Q9UDY2 1190 aa18.49■□□□□ 0.55
ITGB1-215ENST00000488494 STOML2Q9UJZ1 356 aa18.49■□□□□ 0.55
ITGB1-215ENST00000488494 CLEC4EQ9ULY5 219 aa18.49■□□□□ 0.55
ITGB1-215ENST00000488494 NAALADL1Q9UQQ1 740 aa18.49■□□□□ 0.55
ITGB1-215ENST00000488494 FHOD1Q9Y613 1164 aa18.49■□□□□ 0.55
ITGB1-215ENST00000488494 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.49■□□□□ 0.55
ITGB1-215ENST00000488494 BCKDHBP21953 392 aa18.48■□□□□ 0.55
ITGB1-215ENST00000488494 TBX4P57082 545 aa18.48■□□□□ 0.55
ITGB1-215ENST00000488494 PTK2Q05397 1052 aa18.48■□□□□ 0.55
ITGB1-215ENST00000488494 RING1Q06587 406 aa18.48■□□□□ 0.55
ITGB1-215ENST00000488494 CSRP2Q16527 193 aa18.48■□□□□ 0.55
ITGB1-215ENST00000488494 RSPO4Q2I0M5 234 aaPredicted RBP18.48■□□□□ 0.55
ITGB1-215ENST00000488494 MPPE1Q53F39 396 aa18.48■□□□□ 0.55
ITGB1-215ENST00000488494 ADGRF1Q5T601 910 aa18.48■□□□□ 0.55
ITGB1-215ENST00000488494 CDKAL1Q5VV42 579 aa18.48■□□□□ 0.55
ITGB1-215ENST00000488494 PRR23CQ6ZRP0 262 aa18.48■□□□□ 0.55
ITGB1-215ENST00000488494 C11orf57Q6ZUT1 292 aaPredicted RBP18.48■□□□□ 0.55
ITGB1-215ENST00000488494 SLC47A2Q86VL8 602 aa18.48■□□□□ 0.55
ITGB1-215ENST00000488494 C1orf131Q8NDD1 294 aaKnown RBP18.48■□□□□ 0.55
ITGB1-215ENST00000488494 OLIG1Q8TAK6 271 aa18.48■□□□□ 0.55
ITGB1-215ENST00000488494 ADAM32Q8TC27 787 aa18.48■□□□□ 0.55
ITGB1-215ENST00000488494 ENOX1Q8TC92 643 aaKnown RBP18.48■□□□□ 0.55
ITGB1-215ENST00000488494 PIWIL1Q96J94 861 aaKnown RBP18.48■□□□□ 0.55
ITGB1-215ENST00000488494 SERPINB11Q96P15 392 aa18.48■□□□□ 0.55
ITGB1-215ENST00000488494 CPXM1Q96SM3 734 aa18.48■□□□□ 0.55
ITGB1-215ENST00000488494 TRIM62Q9BVG3 475 aa18.48■□□□□ 0.55
ITGB1-215ENST00000488494 ARRDC1-AS1Q9H2J1 176 aa18.48■□□□□ 0.55
ITGB1-215ENST00000488494 RAD54BQ9Y620 910 aa18.48■□□□□ 0.55
ITGB1-215ENST00000488494 SPAG17Q6Q759 2223 aa18.47■□□□□ 0.55
ITGB1-215ENST00000488494 LAMA1P25391 3075 aa18.47■□□□□ 0.55
ITGB1-215ENST00000488494 CACNA1AO00555 2505 aa18.47■□□□□ 0.55
ITGB1-215ENST00000488494 A0A1W2PQF6 199 aa18.47■□□□□ 0.55
ITGB1-215ENST00000488494 FOXN3O00409 490 aaPredicted RBP18.47■□□□□ 0.55
ITGB1-215ENST00000488494 GFRA2O00451 464 aa18.47■□□□□ 0.55
ITGB1-215ENST00000488494 MBD3O95983 291 aa18.47■□□□□ 0.55
ITGB1-215ENST00000488494 GABRG2P18507 467 aa18.47■□□□□ 0.55
ITGB1-215ENST00000488494 SLC11A2P49281 568 aa18.47■□□□□ 0.55
ITGB1-215ENST00000488494 SGSHP51688 502 aa18.47■□□□□ 0.55
ITGB1-215ENST00000488494 ZNF445P59923 1031 aa18.47■□□□□ 0.55
ITGB1-215ENST00000488494 PMS2CLQ68D20 193 aa18.47■□□□□ 0.55
ITGB1-215ENST00000488494 SDE2Q6IQ49 451 aa18.47■□□□□ 0.55
ITGB1-215ENST00000488494 KIAA1211LQ6NV74 962 aa18.47■□□□□ 0.55
ITGB1-215ENST00000488494 DPY19L2P1Q6NXN4 242 aa18.47■□□□□ 0.55
ITGB1-215ENST00000488494 TMEM110Q86TL2 294 aa18.47■□□□□ 0.55
ITGB1-215ENST00000488494 C11orf74Q86VG3 221 aa18.47■□□□□ 0.55
ITGB1-215ENST00000488494 UNC45BQ8IWX7 931 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms