RNA–Protein interactions for RNA: ENST00000488317.1

SRRM1-215, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-215ENST00000488317 MAN1A1P33908 653 aa5.3□□□□□ -1.56
SRRM1-215ENST00000488317 GRK5P34947 590 aa5.3□□□□□ -1.56
SRRM1-215ENST00000488317 CCR5P51681 352 aa5.3□□□□□ -1.56
SRRM1-215ENST00000488317 RBM6P78332 1123 aaKnown RBP5.3□□□□□ -1.56
SRRM1-215ENST00000488317 TXNL4AP83876 142 aaKnown RBP5.3□□□□□ -1.56
SRRM1-215ENST00000488317 PTPRRQ15256 657 aa5.3□□□□□ -1.56
SRRM1-215ENST00000488317 PLAC9Q5JTB6 97 aa5.3□□□□□ -1.56
SRRM1-215ENST00000488317 HYIQ5T013 277 aa5.3□□□□□ -1.56
SRRM1-215ENST00000488317 ATG16L1Q676U5 607 aa5.3□□□□□ -1.56
SRRM1-215ENST00000488317 PCGF5Q86SE9 256 aa5.3□□□□□ -1.56
SRRM1-215ENST00000488317 LCORLQ8N3X6 602 aa5.3□□□□□ -1.56
SRRM1-215ENST00000488317 ANKRD44Q8N8A2 993 aa5.3□□□□□ -1.56
SRRM1-215ENST00000488317 FAM71DQ8N9W8 422 aa5.3□□□□□ -1.56
SRRM1-215ENST00000488317 USP38Q8NB14 1042 aa5.3□□□□□ -1.56
SRRM1-215ENST00000488317 RRP36Q96EU6 259 aaKnown RBP5.3□□□□□ -1.56
SRRM1-215ENST00000488317 PBKQ96KB5 322 aa5.3□□□□□ -1.56
SRRM1-215ENST00000488317 WDR11Q9BZH6 1224 aa5.3□□□□□ -1.56
SRRM1-215ENST00000488317 ABHD16BQ9H3Z7 469 aa5.3□□□□□ -1.56
SRRM1-215ENST00000488317 PLEKHA2Q9HB19 425 aa5.3□□□□□ -1.56
SRRM1-215ENST00000488317 USP29Q9HBJ7 922 aa5.3□□□□□ -1.56
SRRM1-215ENST00000488317 ARHGEF3Q9NR81 526 aa5.3□□□□□ -1.56
SRRM1-215ENST00000488317 SWAP70Q9UH65 585 aa5.3□□□□□ -1.56
SRRM1-215ENST00000488317 ASAP1Q9ULH1 1129 aa5.3□□□□□ -1.56
SRRM1-215ENST00000488317 SLC12A4Q9UP95 1085 aa5.3□□□□□ -1.56
SRRM1-215ENST00000488317 REXO2Q9Y3B8 237 aaKnown RBP5.3□□□□□ -1.56
SRRM1-215ENST00000488317 CCDC88BA6NC98 1476 aa5.3□□□□□ -1.56
SRRM1-215ENST00000488317 CEP164Q9UPV0 1460 aa5.3□□□□□ -1.56
SRRM1-215ENST00000488317 CCDC187A0A096LP49 1063 aa5.29□□□□□ -1.56
SRRM1-215ENST00000488317 LOC105369274A0A096LPK9 316 aa5.29□□□□□ -1.56
SRRM1-215ENST00000488317 LOC102723532A0A0G2JNH3 316 aa5.29□□□□□ -1.56
SRRM1-215ENST00000488317 GXYLT2A0PJZ3 443 aa5.29□□□□□ -1.56
SRRM1-215ENST00000488317 PIPSLA2A3N6 862 aa5.29□□□□□ -1.56
SRRM1-215ENST00000488317 FAM90A20PA6NIJ5 464 aa5.29□□□□□ -1.56
SRRM1-215ENST00000488317 M0QZQ0 153 aa5.29□□□□□ -1.56
SRRM1-215ENST00000488317 KLK10O43240 276 aa5.29□□□□□ -1.56
SRRM1-215ENST00000488317 TMPRSS11DO60235 418 aa5.29□□□□□ -1.56
SRRM1-215ENST00000488317 CYP21A2P08686 494 aa5.29□□□□□ -1.56
SRRM1-215ENST00000488317 HNRNPA1P09651 372 aaKnown RBP eCLIP5.29□□□□□ -1.56
SRRM1-215ENST00000488317 TMIGD3P0DMS9 266 aaPredicted RBP5.29□□□□□ -1.56
SRRM1-215ENST00000488317 EGR2P11161 476 aaPredicted RBP5.29□□□□□ -1.56
SRRM1-215ENST00000488317 NDUFB7P17568 137 aa5.29□□□□□ -1.56
SRRM1-215ENST00000488317 ENGP17813 658 aa5.29□□□□□ -1.56
SRRM1-215ENST00000488317 CYP2C18P33260 490 aa5.29□□□□□ -1.56
SRRM1-215ENST00000488317 MCM5P33992 734 aa5.29□□□□□ -1.56
SRRM1-215ENST00000488317 IGHMBP2P38935 993 aaKnown RBP5.29□□□□□ -1.56
SRRM1-215ENST00000488317 FOLR3P41439 243 aa5.29□□□□□ -1.56
SRRM1-215ENST00000488317 PCP4P48539 62 aa5.29□□□□□ -1.56
SRRM1-215ENST00000488317 FAM3BP58499 235 aaPredicted RBP5.29□□□□□ -1.56
SRRM1-215ENST00000488317 DEUP1Q05D60 604 aa5.29□□□□□ -1.56
SRRM1-215ENST00000488317 FZD5Q13467 585 aa5.29□□□□□ -1.56
SRRM1-215ENST00000488317 CYP1B1Q16678 543 aa5.29□□□□□ -1.56
SRRM1-215ENST00000488317 TXNRD1Q16881 649 aa5.29□□□□□ -1.56
SRRM1-215ENST00000488317 TBC1D25Q3MII6 688 aa5.29□□□□□ -1.56
SRRM1-215ENST00000488317 LRRC24Q50LG9 513 aa5.29□□□□□ -1.56
SRRM1-215ENST00000488317 ZNF484Q5JVG2 852 aa5.29□□□□□ -1.56
SRRM1-215ENST00000488317 LY6G5CQ5SRR4 150 aa5.29□□□□□ -1.56
SRRM1-215ENST00000488317 ABHD17BQ5VST6 288 aa5.29□□□□□ -1.56
SRRM1-215ENST00000488317 KAZNQ674X7 775 aa5.29□□□□□ -1.56
SRRM1-215ENST00000488317 DENND2CQ68D51 928 aa5.29□□□□□ -1.56
SRRM1-215ENST00000488317 PTCHD4Q6ZW05 846 aa5.29□□□□□ -1.56
SRRM1-215ENST00000488317 BBS12Q6ZW61 710 aa5.29□□□□□ -1.56
SRRM1-215ENST00000488317 RASGRP2Q7LDG7 609 aa5.29□□□□□ -1.56
SRRM1-215ENST00000488317 OR4N4Q8N0Y3 316 aa5.29□□□□□ -1.56
SRRM1-215ENST00000488317 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.29□□□□□ -1.56
SRRM1-215ENST00000488317 ABHD11Q8NFV4 315 aa5.29□□□□□ -1.56
SRRM1-215ENST00000488317 CXorf38Q8TB03 319 aa5.29□□□□□ -1.56
SRRM1-215ENST00000488317 PROKR1Q8TCW9 393 aa5.29□□□□□ -1.56
SRRM1-215ENST00000488317 NPIPB3Q92617 1050 aa5.29□□□□□ -1.56
SRRM1-215ENST00000488317 CTHRC1Q96CG8 243 aa5.29□□□□□ -1.56
SRRM1-215ENST00000488317 KTI12Q96EK9 354 aaPredicted RBP5.29□□□□□ -1.56
SRRM1-215ENST00000488317 PIGSQ96S52 555 aa5.29□□□□□ -1.56
SRRM1-215ENST00000488317 CINPQ9BW66 212 aaPredicted RBP5.29□□□□□ -1.56
SRRM1-215ENST00000488317 SAP30LQ9HAJ7 183 aa5.29□□□□□ -1.56
SRRM1-215ENST00000488317 PREBQ9HCU5 417 aa5.29□□□□□ -1.56
SRRM1-215ENST00000488317 SLC2A4RGQ9NR83 387 aa5.29□□□□□ -1.56
SRRM1-215ENST00000488317 SNX15Q9NRS6 342 aa5.29□□□□□ -1.56
SRRM1-215ENST00000488317 AMFRQ9UKV5 643 aa5.29□□□□□ -1.56
SRRM1-215ENST00000488317 CNOT11Q9UKZ1 510 aaKnown RBP5.29□□□□□ -1.56
SRRM1-215ENST00000488317 LMTK3Q96Q04 1460 aa5.28□□□□□ -1.56
SRRM1-215ENST00000488317 VWA3AA6NCI4 1184 aa5.28□□□□□ -1.56
SRRM1-215ENST00000488317 SAC3D1A6NKF1 404 aa5.28□□□□□ -1.56
SRRM1-215ENST00000488317 QSOX1O00391 747 aa5.28□□□□□ -1.56
SRRM1-215ENST00000488317 MPPED1O15442 326 aa5.28□□□□□ -1.56
SRRM1-215ENST00000488317 NKX2-8O15522 239 aa5.28□□□□□ -1.56
SRRM1-215ENST00000488317 HNRNPRO43390 633 aaKnown RBP5.28□□□□□ -1.56
SRRM1-215ENST00000488317 ANP32CO43423 234 aa5.28□□□□□ -1.56
SRRM1-215ENST00000488317 PEX11BO96011 259 aa5.28□□□□□ -1.56
SRRM1-215ENST00000488317 BDNFP23560 247 aa5.28□□□□□ -1.56
SRRM1-215ENST00000488317 CTGFP29279 349 aa5.28□□□□□ -1.56
SRRM1-215ENST00000488317 CXCR5P32302 372 aa5.28□□□□□ -1.56
SRRM1-215ENST00000488317 PGM1P36871 562 aa5.28□□□□□ -1.56
SRRM1-215ENST00000488317 RCAN1P53805 252 aa5.28□□□□□ -1.56
SRRM1-215ENST00000488317 NR1H2P55055 460 aa5.28□□□□□ -1.56
SRRM1-215ENST00000488317 RPL15P61313 204 aaKnown RBP5.28□□□□□ -1.56
SRRM1-215ENST00000488317 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.28□□□□□ -1.56
SRRM1-215ENST00000488317 CCDC15Q0P6D6 951 aa5.28□□□□□ -1.56
SRRM1-215ENST00000488317 DNASE1L3Q13609 305 aa5.28□□□□□ -1.56
SRRM1-215ENST00000488317 L1TD1Q5T7N2 865 aaKnown RBP5.28□□□□□ -1.56
SRRM1-215ENST00000488317 ACSM6Q6P461 480 aa5.28□□□□□ -1.56
SRRM1-215ENST00000488317 C16orf89Q6UX73 402 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms