RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 NOS2P35228 1153 aa11.5□□□□□ -0.57
UBE4B-210ENST00000488228 RFC1P35251 1148 aaPredicted RBP11.5□□□□□ -0.57
UBE4B-210ENST00000488228 ATXN1P54253 815 aaKnown RBP11.5□□□□□ -0.57
UBE4B-210ENST00000488228 RPL7AP62424 266 aaKnown RBP11.5□□□□□ -0.57
UBE4B-210ENST00000488228 ATP11AP98196 1134 aa11.5□□□□□ -0.57
UBE4B-210ENST00000488228 PFKPQ01813 784 aa11.5□□□□□ -0.57
UBE4B-210ENST00000488228 SIGLEC14Q08ET2 396 aa11.5□□□□□ -0.57
UBE4B-210ENST00000488228 NNTQ13423 1086 aa11.5□□□□□ -0.57
UBE4B-210ENST00000488228 MLF2Q15773 248 aaPredicted RBP11.5□□□□□ -0.57
UBE4B-210ENST00000488228 SLC18A3Q16572 532 aa11.5□□□□□ -0.57
UBE4B-210ENST00000488228 CDO1Q16878 200 aa11.5□□□□□ -0.57
UBE4B-210ENST00000488228 C15orf59Q2T9L4 293 aaPredicted RBP11.5□□□□□ -0.57
UBE4B-210ENST00000488228 ITPRIPL2Q3MIP1 535 aa11.5□□□□□ -0.57
UBE4B-210ENST00000488228 RAB6CQ53S08 254 aa11.5□□□□□ -0.57
UBE4B-210ENST00000488228 ZC3H12AQ5D1E8 599 aaKnown RBP11.5□□□□□ -0.57
UBE4B-210ENST00000488228 PPP1R15BQ5SWA1 713 aa11.5□□□□□ -0.57
UBE4B-210ENST00000488228 CCDC122Q5T0U0 273 aa11.5□□□□□ -0.57
UBE4B-210ENST00000488228 PPP1R2P3Q6NXS1 205 aa11.5□□□□□ -0.57
UBE4B-210ENST00000488228 ALKBH5Q6P6C2 394 aaKnown RBP11.5□□□□□ -0.57
UBE4B-210ENST00000488228 TPRG1Q6ZUI0 275 aa11.5□□□□□ -0.57
UBE4B-210ENST00000488228 HTR3DQ70Z44 454 aa11.5□□□□□ -0.57
UBE4B-210ENST00000488228 CPA6Q8N4T0 437 aa11.5□□□□□ -0.57
UBE4B-210ENST00000488228 RXFP2Q8WXD0 754 aa11.5□□□□□ -0.57
UBE4B-210ENST00000488228 EDAQ92838 391 aa11.5□□□□□ -0.57
UBE4B-210ENST00000488228 BHMTQ93088 406 aa11.5□□□□□ -0.57
UBE4B-210ENST00000488228 ARHGEF26Q96DR7 871 aa11.5□□□□□ -0.57
UBE4B-210ENST00000488228 CHFRQ96EP1 664 aa11.5□□□□□ -0.57
UBE4B-210ENST00000488228 NPY6RQ99463 290 aa11.5□□□□□ -0.57
UBE4B-210ENST00000488228 TRIM7Q9C029 511 aa11.5□□□□□ -0.57
UBE4B-210ENST00000488228 RAB6CQ9H0N0 254 aa11.5□□□□□ -0.57
UBE4B-210ENST00000488228 THAP2Q9H0W7 228 aa11.5□□□□□ -0.57
UBE4B-210ENST00000488228 ISCUQ9H1K1 167 aa11.5□□□□□ -0.57
UBE4B-210ENST00000488228 PIGVQ9NUD9 493 aa11.5□□□□□ -0.57
UBE4B-210ENST00000488228 MYO1AQ9UBC5 1043 aa11.5□□□□□ -0.57
UBE4B-210ENST00000488228 XPO7Q9UIA9 1087 aaKnown RBP11.5□□□□□ -0.57
UBE4B-210ENST00000488228 AGO1Q9UL18 857 aaKnown RBP11.5□□□□□ -0.57
UBE4B-210ENST00000488228 STAP1Q9ULZ2 295 aa11.5□□□□□ -0.57
UBE4B-210ENST00000488228 TLR6Q9Y2C9 796 aa11.5□□□□□ -0.57
UBE4B-210ENST00000488228 ZNF318Q5VUA4 2279 aa11.49□□□□□ -0.57
UBE4B-210ENST00000488228 SOWAHDA6NJG2 315 aa11.49□□□□□ -0.57
UBE4B-210ENST00000488228 PI4K2BG5E9Z4 385 aa11.49□□□□□ -0.57
UBE4B-210ENST00000488228 TRDMT1O14717 391 aaKnown RBP11.49□□□□□ -0.57
UBE4B-210ENST00000488228 SLC9A3R1O14745 358 aaPredicted RBP11.49□□□□□ -0.57
UBE4B-210ENST00000488228 NFATC1O95644 943 aa11.49□□□□□ -0.57
UBE4B-210ENST00000488228 APOEP02649 317 aa11.49□□□□□ -0.57
UBE4B-210ENST00000488228 GPD1P21695 349 aa11.49□□□□□ -0.57
UBE4B-210ENST00000488228 CD72P21854 359 aa11.49□□□□□ -0.57
UBE4B-210ENST00000488228 SDC4P31431 198 aa11.49□□□□□ -0.57
UBE4B-210ENST00000488228 CTHP32929 405 aa11.49□□□□□ -0.57
UBE4B-210ENST00000488228 GGCXP38435 758 aa11.49□□□□□ -0.57
UBE4B-210ENST00000488228 HARS2P49590 506 aaKnown RBP11.49□□□□□ -0.57
UBE4B-210ENST00000488228 KPNA1P52294 538 aaPredicted RBP11.49□□□□□ -0.57
UBE4B-210ENST00000488228 OGDHQ02218 1023 aa11.49□□□□□ -0.57
UBE4B-210ENST00000488228 RING1Q06587 406 aa11.49□□□□□ -0.57
UBE4B-210ENST00000488228 ZNF252P-AS1Q0IIN9 211 aa11.49□□□□□ -0.57
UBE4B-210ENST00000488228 MAMLD1Q13495 774 aa11.49□□□□□ -0.57
UBE4B-210ENST00000488228 RUNX3Q13761 415 aa11.49□□□□□ -0.57
UBE4B-210ENST00000488228 LY6G5CQ5SRR4 150 aa11.49□□□□□ -0.57
UBE4B-210ENST00000488228 SH3PXD2AQ5TCZ1 1133 aa11.49□□□□□ -0.57
UBE4B-210ENST00000488228 NUGGCQ68CJ6 796 aa11.49□□□□□ -0.57
UBE4B-210ENST00000488228 PLEKHA7Q6IQ23 1121 aa11.49□□□□□ -0.57
UBE4B-210ENST00000488228 DCUN1D2Q6PH85 259 aa11.49□□□□□ -0.57
UBE4B-210ENST00000488228 TXNDC11Q6PKC3 985 aa11.49□□□□□ -0.57
UBE4B-210ENST00000488228 TRIM67Q6ZTA4 783 aa11.49□□□□□ -0.57
UBE4B-210ENST00000488228 TRIM11Q96F44 468 aa11.49□□□□□ -0.57
UBE4B-210ENST00000488228 P2RY11Q96G91 374 aa11.49□□□□□ -0.57
UBE4B-210ENST00000488228 SLC39A13Q96H72 371 aa11.49□□□□□ -0.57
UBE4B-210ENST00000488228 VCPIP1Q96JH7 1222 aa11.49□□□□□ -0.57
UBE4B-210ENST00000488228 CCDC42Q96M95 316 aa11.49□□□□□ -0.57
UBE4B-210ENST00000488228 PANX2Q96RD6 677 aa11.49□□□□□ -0.57
UBE4B-210ENST00000488228 DDX23Q9BUQ8 820 aaKnown RBP11.49□□□□□ -0.57
UBE4B-210ENST00000488228 DCLK3Q9C098 648 aa11.49□□□□□ -0.57
UBE4B-210ENST00000488228 ECT2Q9H8V3 914 aa11.49□□□□□ -0.57
UBE4B-210ENST00000488228 TBC1D14Q9P2M4 693 aa11.49□□□□□ -0.57
UBE4B-210ENST00000488228 MUC22E2RYF6 1773 aaPredicted RBP11.49□□□□□ -0.57
UBE4B-210ENST00000488228 TMEM221A6NGB7 291 aa11.48□□□□□ -0.57
UBE4B-210ENST00000488228 SHISA7A6NL88 538 aa11.48□□□□□ -0.57
UBE4B-210ENST00000488228 SIGLEC16A6NMB1 481 aa11.48□□□□□ -0.57
UBE4B-210ENST00000488228 GOLGA6L6A8MZA4 724 aa11.48□□□□□ -0.57
UBE4B-210ENST00000488228 SPECC1L-ADORA2AF8WAN1 911 aa11.48□□□□□ -0.57
UBE4B-210ENST00000488228 I6L893 689 aaPredicted RBP11.48□□□□□ -0.57
UBE4B-210ENST00000488228 M0R296 226 aa11.48□□□□□ -0.57
UBE4B-210ENST00000488228 CCP110O43303 1012 aa11.48□□□□□ -0.57
UBE4B-210ENST00000488228 ADH1CP00326 375 aa11.48□□□□□ -0.57
UBE4B-210ENST00000488228 MYBL1P10243 752 aa11.48□□□□□ -0.57
UBE4B-210ENST00000488228 ADH5P11766 374 aa11.48□□□□□ -0.57
UBE4B-210ENST00000488228 PDGFRAP16234 1089 aa11.48□□□□□ -0.57
UBE4B-210ENST00000488228 FECHP22830 423 aa11.48□□□□□ -0.57
UBE4B-210ENST00000488228 SLC6A4P31645 630 aa11.48□□□□□ -0.57
UBE4B-210ENST00000488228 GJA4P35212 333 aa11.48□□□□□ -0.57
UBE4B-210ENST00000488228 RDXP35241 583 aaKnown RBP11.48□□□□□ -0.57
UBE4B-210ENST00000488228 PTPN9P43378 593 aa11.48□□□□□ -0.57
UBE4B-210ENST00000488228 GALCP54803 685 aa11.48□□□□□ -0.57
UBE4B-210ENST00000488228 EIF4EBP2Q13542 120 aaPredicted RBP11.48□□□□□ -0.57
UBE4B-210ENST00000488228 DHCR24Q15392 516 aa11.48□□□□□ -0.57
UBE4B-210ENST00000488228 GAB4Q2WGN9 574 aa11.48□□□□□ -0.57
UBE4B-210ENST00000488228 SLC25A52Q3SY17 297 aa11.48□□□□□ -0.57
UBE4B-210ENST00000488228 CCDC14Q49A88 953 aa11.48□□□□□ -0.57
UBE4B-210ENST00000488228 SLC44A4Q53GD3 710 aa11.48□□□□□ -0.57
UBE4B-210ENST00000488228 FAM133BQ5BKY9 247 aaKnown RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms