RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 F5P12259 2224 aa16.38■□□□□ 0.21
C9orf3-219ENST00000488186 F9P00740 461 aa16.38■□□□□ 0.21
C9orf3-219ENST00000488186 SLC2A3P11169 496 aa16.38■□□□□ 0.21
C9orf3-219ENST00000488186 SDC4P31431 198 aa16.38■□□□□ 0.21
C9orf3-219ENST00000488186 CYLC1P35663 651 aaPredicted RBP16.38■□□□□ 0.21
C9orf3-219ENST00000488186 GSCP56915 257 aaPredicted RBP16.38■□□□□ 0.21
C9orf3-219ENST00000488186 DEUP1Q05D60 604 aa16.38■□□□□ 0.21
C9orf3-219ENST00000488186 NNTQ13423 1086 aa16.38■□□□□ 0.21
C9orf3-219ENST00000488186 SLC25A52Q3SY17 297 aa16.38■□□□□ 0.21
C9orf3-219ENST00000488186 TMEM31Q5JXX7 168 aa16.38■□□□□ 0.21
C9orf3-219ENST00000488186 ARCQ7LC44 396 aa16.38■□□□□ 0.21
C9orf3-219ENST00000488186 DNAAF5Q86Y56 855 aa16.38■□□□□ 0.21
C9orf3-219ENST00000488186 TMTC1Q8IUR5 882 aa16.38■□□□□ 0.21
C9orf3-219ENST00000488186 BBS7Q8IWZ6 715 aa16.38■□□□□ 0.21
C9orf3-219ENST00000488186 EMC1Q8N766 993 aa16.38■□□□□ 0.21
C9orf3-219ENST00000488186 RIN3Q8TB24 985 aa16.38■□□□□ 0.21
C9orf3-219ENST00000488186 RXFP2Q8WXD0 754 aa16.38■□□□□ 0.21
C9orf3-219ENST00000488186 SHDQ96IW2 340 aa16.38■□□□□ 0.21
C9orf3-219ENST00000488186 MFSD1Q9H3U5 465 aa16.38■□□□□ 0.21
C9orf3-219ENST00000488186 C11orf16Q9NQ32 467 aa16.38■□□□□ 0.21
C9orf3-219ENST00000488186 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.38■□□□□ 0.21
C9orf3-219ENST00000488186 TMEM59LQ9UK28 342 aa16.38■□□□□ 0.21
C9orf3-219ENST00000488186 PAXBP1Q9Y5B6 917 aa16.38■□□□□ 0.21
C9orf3-219ENST00000488186 KIF26AQ9ULI4 1882 aaPredicted RBP16.37■□□□□ 0.21
C9orf3-219ENST00000488186 ATMINO43313 823 aaPredicted RBP16.37■□□□□ 0.21
C9orf3-219ENST00000488186 IPO7O95373 1038 aaKnown RBP16.37■□□□□ 0.21
C9orf3-219ENST00000488186 GJB6O95452 261 aa16.37■□□□□ 0.21
C9orf3-219ENST00000488186 MOCS2O96007 188 aaPredicted RBP16.37■□□□□ 0.21
C9orf3-219ENST00000488186 ARSAP15289 507 aa16.37■□□□□ 0.21
C9orf3-219ENST00000488186 GPD1P21695 349 aa16.37■□□□□ 0.21
C9orf3-219ENST00000488186 CCR1P32246 355 aa16.37■□□□□ 0.21
C9orf3-219ENST00000488186 CHKAP35790 457 aa16.37■□□□□ 0.21
C9orf3-219ENST00000488186 FLT3P36888 993 aa16.37■□□□□ 0.21
C9orf3-219ENST00000488186 GSDMDP57764 484 aa16.37■□□□□ 0.21
C9orf3-219ENST00000488186 ATP11AP98196 1134 aa16.37■□□□□ 0.21
C9orf3-219ENST00000488186 RING1Q06587 406 aa16.37■□□□□ 0.21
C9orf3-219ENST00000488186 TNK2Q07912 1038 aa16.37■□□□□ 0.21
C9orf3-219ENST00000488186 SPA17Q15506 151 aa16.37■□□□□ 0.21
C9orf3-219ENST00000488186 EML3Q32P44 896 aa16.37■□□□□ 0.21
C9orf3-219ENST00000488186 CCDC170Q8IYT3 715 aa16.37■□□□□ 0.21
C9orf3-219ENST00000488186 ADGRG2Q8IZP9 1017 aa16.37■□□□□ 0.21
C9orf3-219ENST00000488186 ATP6V0D2Q8N8Y2 350 aa16.37■□□□□ 0.21
C9orf3-219ENST00000488186 JOSD2Q8TAC2 188 aa16.37■□□□□ 0.21
C9orf3-219ENST00000488186 OLIG1Q8TAK6 271 aa16.37■□□□□ 0.21
C9orf3-219ENST00000488186 WBP2Q969T9 261 aa16.37■□□□□ 0.21
C9orf3-219ENST00000488186 EXOC4Q96A65 974 aa16.37■□□□□ 0.21
C9orf3-219ENST00000488186 CFAP57Q96MR6 1250 aa16.37■□□□□ 0.21
C9orf3-219ENST00000488186 MCEEQ96PE7 176 aa16.37■□□□□ 0.21
C9orf3-219ENST00000488186 DDX50Q9BQ39 737 aaKnown RBP16.37■□□□□ 0.21
C9orf3-219ENST00000488186 C8orf33Q9H7E9 229 aaPredicted RBP16.37■□□□□ 0.21
C9orf3-219ENST00000488186 ECT2Q9H8V3 914 aa16.37■□□□□ 0.21
C9orf3-219ENST00000488186 HEBP1Q9NRV9 189 aa16.37■□□□□ 0.21
C9orf3-219ENST00000488186 GTSE1Q9NYZ3 720 aa16.37■□□□□ 0.21
C9orf3-219ENST00000488186 AGO1Q9UL18 857 aaKnown RBP16.37■□□□□ 0.21
C9orf3-219ENST00000488186 TMEM221A6NGB7 291 aa16.36■□□□□ 0.21
C9orf3-219ENST00000488186 M0R296 226 aa16.36■□□□□ 0.21
C9orf3-219ENST00000488186 IRAK2O43187 625 aa16.36■□□□□ 0.21
C9orf3-219ENST00000488186 ADH1CP00326 375 aa16.36■□□□□ 0.21
C9orf3-219ENST00000488186 H2AFZP0C0S5 128 aa16.36■□□□□ 0.21
C9orf3-219ENST00000488186 RFC1P35251 1148 aaPredicted RBP16.36■□□□□ 0.21
C9orf3-219ENST00000488186 MAMLD1Q13495 774 aa16.36■□□□□ 0.21
C9orf3-219ENST00000488186 MLF2Q15773 248 aaPredicted RBP16.36■□□□□ 0.21
C9orf3-219ENST00000488186 CDO1Q16878 200 aa16.36■□□□□ 0.21
C9orf3-219ENST00000488186 ANO4Q32M45 955 aa16.36■□□□□ 0.21
C9orf3-219ENST00000488186 ZC3H12AQ5D1E8 599 aaKnown RBP16.36■□□□□ 0.21
C9orf3-219ENST00000488186 H2AFVQ71UI9 128 aa16.36■□□□□ 0.21
C9orf3-219ENST00000488186 SIX5Q8N196 739 aa16.36■□□□□ 0.21
C9orf3-219ENST00000488186 CTNNBL1Q8WYA6 563 aaPredicted RBP16.36■□□□□ 0.21
C9orf3-219ENST00000488186 TBCBQ99426 244 aa16.36■□□□□ 0.21
C9orf3-219ENST00000488186 NPY6RQ99463 290 aa16.36■□□□□ 0.21
C9orf3-219ENST00000488186 BAG1Q99933 345 aaPredicted RBP16.36■□□□□ 0.21
C9orf3-219ENST00000488186 WDCPQ9H6R7 721 aa16.36■□□□□ 0.21
C9orf3-219ENST00000488186 LUC7LQ9NQ29 371 aaKnown RBP16.36■□□□□ 0.21
C9orf3-219ENST00000488186 ARHGEF3Q9NR81 526 aa16.36■□□□□ 0.21
C9orf3-219ENST00000488186 SPTLC3Q9NUV7 552 aa16.36■□□□□ 0.21
C9orf3-219ENST00000488186 PIAS3Q9Y6X2 628 aa16.36■□□□□ 0.21
C9orf3-219ENST00000488186 HELZP42694 1942 aaKnown RBP16.36■□□□□ 0.21
C9orf3-219ENST00000488186 ZNF318Q5VUA4 2279 aa16.36■□□□□ 0.21
C9orf3-219ENST00000488186 C2CD4BA6NLJ0 364 aa16.35■□□□□ 0.21
C9orf3-219ENST00000488186 MAN2B1O00754 1011 aa16.35■□□□□ 0.21
C9orf3-219ENST00000488186 LATS1O95835 1130 aa16.35■□□□□ 0.21
C9orf3-219ENST00000488186 KLKB1P03952 638 aa16.35■□□□□ 0.21
C9orf3-219ENST00000488186 CYBBP04839 570 aa16.35■□□□□ 0.21
C9orf3-219ENST00000488186 GLULP15104 373 aa16.35■□□□□ 0.21
C9orf3-219ENST00000488186 GALCP54803 685 aa16.35■□□□□ 0.21
C9orf3-219ENST00000488186 PITX1P78337 314 aaPredicted RBP16.35■□□□□ 0.21
C9orf3-219ENST00000488186 PRKCQQ04759 706 aa16.35■□□□□ 0.21
C9orf3-219ENST00000488186 GAD2Q05329 585 aa16.35■□□□□ 0.21
C9orf3-219ENST00000488186 MTA1Q13330 715 aa16.35■□□□□ 0.21
C9orf3-219ENST00000488186 GSE1Q14687 1217 aa16.35■□□□□ 0.21
C9orf3-219ENST00000488186 DHCR24Q15392 516 aa16.35■□□□□ 0.21
C9orf3-219ENST00000488186 ASTE1Q2TB18 679 aaPredicted RBP16.35■□□□□ 0.21
C9orf3-219ENST00000488186 C10orf76Q5T2E6 689 aa16.35■□□□□ 0.21
C9orf3-219ENST00000488186 PLEKHA7Q6IQ23 1121 aa16.35■□□□□ 0.21
C9orf3-219ENST00000488186 Q6ZNB5 142 aa16.35■□□□□ 0.21
C9orf3-219ENST00000488186 TPGS1Q6ZTW0 290 aa16.35■□□□□ 0.21
C9orf3-219ENST00000488186 TPRG1Q6ZUI0 275 aa16.35■□□□□ 0.21
C9orf3-219ENST00000488186 FCRL2Q96LA5 508 aaPredicted RBP16.35■□□□□ 0.21
C9orf3-219ENST00000488186 THAP2Q9H0W7 228 aa16.35■□□□□ 0.21
C9orf3-219ENST00000488186 HPS4Q9NQG7 708 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms