RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 TMEM110Q86TL2 294 aa11.95□□□□□ -0.5
SPEN-205ENST00000487496 OLIG1Q8TAK6 271 aa11.95□□□□□ -0.5
SPEN-205ENST00000487496 GOLGA1Q92805 767 aa11.95□□□□□ -0.5
SPEN-205ENST00000487496 ACOX2Q99424 681 aa11.95□□□□□ -0.5
SPEN-205ENST00000487496 DUSP15Q9H1R2 295 aaPredicted RBP11.95□□□□□ -0.5
SPEN-205ENST00000487496 POLMQ9NP87 494 aaPredicted RBP11.95□□□□□ -0.5
SPEN-205ENST00000487496 SEMA4GQ9NTN9 838 aa11.95□□□□□ -0.5
SPEN-205ENST00000487496 CYTH4Q9UIA0 394 aa11.95□□□□□ -0.5
SPEN-205ENST00000487496 STOML2Q9UJZ1 356 aa11.95□□□□□ -0.5
SPEN-205ENST00000487496 DNAJC12Q9UKB3 198 aa11.95□□□□□ -0.5
SPEN-205ENST00000487496 AJAP1Q9UKB5 411 aaPredicted RBP11.95□□□□□ -0.5
SPEN-205ENST00000487496 CLEC4EQ9ULY5 219 aa11.95□□□□□ -0.5
SPEN-205ENST00000487496 INVSQ9Y283 1065 aa11.95□□□□□ -0.5
SPEN-205ENST00000487496 SDK1Q7Z5N4 2213 aa11.94□□□□□ -0.5
SPEN-205ENST00000487496 PRR5-ARHGAP8B1AHC4 643 aa11.94□□□□□ -0.5
SPEN-205ENST00000487496 KCNJ18B7U540 433 aa11.94□□□□□ -0.5
SPEN-205ENST00000487496 FOXN3O00409 490 aaPredicted RBP11.94□□□□□ -0.5
SPEN-205ENST00000487496 GFRA2O00451 464 aa11.94□□□□□ -0.5
SPEN-205ENST00000487496 PAPSS1O43252 624 aaPredicted RBP11.94□□□□□ -0.5
SPEN-205ENST00000487496 SART1O43290 800 aaKnown RBP11.94□□□□□ -0.5
SPEN-205ENST00000487496 IGLV3-27P01718 113 aa11.94□□□□□ -0.5
SPEN-205ENST00000487496 FYNP06241 537 aa11.94□□□□□ -0.5
SPEN-205ENST00000487496 NCAM1P13591 858 aa11.94□□□□□ -0.5
SPEN-205ENST00000487496 HOXB2P14652 356 aa11.94□□□□□ -0.5
SPEN-205ENST00000487496 NTSR1P30989 418 aa11.94□□□□□ -0.5
SPEN-205ENST00000487496 WASP42768 502 aa11.94□□□□□ -0.5
SPEN-205ENST00000487496 ARHGAP8P85298 464 aa11.94□□□□□ -0.5
SPEN-205ENST00000487496 LMNB2Q03252 620 aa11.94□□□□□ -0.5
SPEN-205ENST00000487496 KCNMA1Q12791 1236 aa11.94□□□□□ -0.5
SPEN-205ENST00000487496 PDCLQ13371 301 aa11.94□□□□□ -0.5
SPEN-205ENST00000487496 KCNJ12Q14500 433 aa11.94□□□□□ -0.5
SPEN-205ENST00000487496 CSRP2Q16527 193 aa11.94□□□□□ -0.5
SPEN-205ENST00000487496 GEN1Q17RS7 908 aa11.94□□□□□ -0.5
SPEN-205ENST00000487496 RSPO4Q2I0M5 234 aaPredicted RBP11.94□□□□□ -0.5
SPEN-205ENST00000487496 DPY19L2P1Q6NXN4 242 aa11.94□□□□□ -0.5
SPEN-205ENST00000487496 RBM43Q6ZSC3 357 aaKnown RBP11.94□□□□□ -0.5
SPEN-205ENST00000487496 CHPFQ8IZ52 775 aa11.94□□□□□ -0.5
SPEN-205ENST00000487496 WDTC1Q8N5D0 677 aa11.94□□□□□ -0.5
SPEN-205ENST00000487496 DDI1Q8WTU0 396 aa11.94□□□□□ -0.5
SPEN-205ENST00000487496 HMGB4Q8WW32 186 aa11.94□□□□□ -0.5
SPEN-205ENST00000487496 ARRDC1-AS1Q9H2J1 176 aa11.94□□□□□ -0.5
SPEN-205ENST00000487496 DLL3Q9NYJ7 618 aa11.94□□□□□ -0.5
SPEN-205ENST00000487496 NAALADL1Q9UQQ1 740 aa11.94□□□□□ -0.5
SPEN-205ENST00000487496 SLC27A6Q9Y2P4 619 aa11.94□□□□□ -0.5
SPEN-205ENST00000487496 NFE2L3Q9Y4A8 694 aa11.94□□□□□ -0.5
SPEN-205ENST00000487496 MYO18AQ92614 2054 aaKnown RBP11.93□□□□□ -0.5
SPEN-205ENST00000487496 A0A1W2PQF6 199 aa11.93□□□□□ -0.5
SPEN-205ENST00000487496 TCRBV21S2A2A0A5A6 115 aa11.93□□□□□ -0.5
SPEN-205ENST00000487496 E5RJQ4 531 aa11.93□□□□□ -0.5
SPEN-205ENST00000487496 GOLGA6L22H0YM25 854 aa11.93□□□□□ -0.5
SPEN-205ENST00000487496 TSPAN3O60637 253 aa11.93□□□□□ -0.5
SPEN-205ENST00000487496 RHOBTB1O94844 696 aa11.93□□□□□ -0.5
SPEN-205ENST00000487496 EPN2O95208 641 aa11.93□□□□□ -0.5
SPEN-205ENST00000487496 LATS1O95835 1130 aa11.93□□□□□ -0.5
SPEN-205ENST00000487496 PNMA6AP0CW24 399 aaPredicted RBP11.93□□□□□ -0.5
SPEN-205ENST00000487496 EEF1GP26641 437 aaKnown RBP11.93□□□□□ -0.5
SPEN-205ENST00000487496 GBP1P32455 592 aa11.93□□□□□ -0.5
SPEN-205ENST00000487496 TBX4P57082 545 aa11.93□□□□□ -0.5
SPEN-205ENST00000487496 ZNF445P59923 1031 aa11.93□□□□□ -0.5
SPEN-205ENST00000487496 PTK2Q05397 1052 aa11.93□□□□□ -0.5
SPEN-205ENST00000487496 PUM1Q14671 1186 aaKnown RBP eCLIP11.93□□□□□ -0.5
SPEN-205ENST00000487496 ELF2Q15723 593 aa11.93□□□□□ -0.5
SPEN-205ENST00000487496 MPPE1Q53F39 396 aa11.93□□□□□ -0.5
SPEN-205ENST00000487496 TCP11X2Q5H9J9 407 aa11.93□□□□□ -0.5
SPEN-205ENST00000487496 ADGRF1Q5T601 910 aa11.93□□□□□ -0.5
SPEN-205ENST00000487496 SDE2Q6IQ49 451 aa11.93□□□□□ -0.5
SPEN-205ENST00000487496 PRR23CQ6ZRP0 262 aa11.93□□□□□ -0.5
SPEN-205ENST00000487496 BEND5Q7L4P6 421 aa11.93□□□□□ -0.5
SPEN-205ENST00000487496 C11orf74Q86VG3 221 aa11.93□□□□□ -0.5
SPEN-205ENST00000487496 UNC45BQ8IWX7 931 aa11.93□□□□□ -0.5
SPEN-205ENST00000487496 PGBD3Q8N328 593 aa11.93□□□□□ -0.5
SPEN-205ENST00000487496 ENOX1Q8TC92 643 aaKnown RBP11.93□□□□□ -0.5
SPEN-205ENST00000487496 DQX1Q8TE96 717 aaKnown RBP11.93□□□□□ -0.5
SPEN-205ENST00000487496 FAM149B1Q96BN6 582 aa11.93□□□□□ -0.5
SPEN-205ENST00000487496 TMA16Q96EY4 203 aaKnown RBP11.93□□□□□ -0.5
SPEN-205ENST00000487496 PIWIL1Q96J94 861 aaKnown RBP11.93□□□□□ -0.5
SPEN-205ENST00000487496 GABRG3Q99928 467 aa11.93□□□□□ -0.5
SPEN-205ENST00000487496 SLC2A11Q9BYW1 496 aa11.93□□□□□ -0.5
SPEN-205ENST00000487496 CD248Q9HCU0 757 aa11.93□□□□□ -0.5
SPEN-205ENST00000487496 BCCIPQ9P287 314 aaKnown RBP eCLIP11.93□□□□□ -0.5
SPEN-205ENST00000487496 PCDHGC3Q9UN70 934 aa11.93□□□□□ -0.5
SPEN-205ENST00000487496 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.93□□□□□ -0.5
SPEN-205ENST00000487496 CEP250Q9BV73 2442 aa11.93□□□□□ -0.5
SPEN-205ENST00000487496 EML5Q05BV3 1969 aa11.92□□□□□ -0.5
SPEN-205ENST00000487496 WDR87Q6ZQQ6 2873 aa11.92□□□□□ -0.5
SPEN-205ENST00000487496 CAPN9O14815 690 aa11.92□□□□□ -0.5
SPEN-205ENST00000487496 GABRG2P18507 467 aa11.92□□□□□ -0.5
SPEN-205ENST00000487496 BCKDHBP21953 392 aa11.92□□□□□ -0.5
SPEN-205ENST00000487496 HOXD9P28356 352 aaPredicted RBP11.92□□□□□ -0.5
SPEN-205ENST00000487496 CLCN1P35523 988 aa11.92□□□□□ -0.5
SPEN-205ENST00000487496 P2RY2P41231 377 aa11.92□□□□□ -0.5
SPEN-205ENST00000487496 YWHAZP63104 245 aaKnown RBP11.92□□□□□ -0.5
SPEN-205ENST00000487496 RING1Q06587 406 aa11.92□□□□□ -0.5
SPEN-205ENST00000487496 CCDC6Q16204 474 aa11.92□□□□□ -0.5
SPEN-205ENST00000487496 MAP7D1Q3KQU3 841 aa11.92□□□□□ -0.5
SPEN-205ENST00000487496 SYPL2Q5VXT5 272 aa11.92□□□□□ -0.5
SPEN-205ENST00000487496 NUGGCQ68CJ6 796 aa11.92□□□□□ -0.5
SPEN-205ENST00000487496 ANKS1BQ7Z6G8 1248 aa11.92□□□□□ -0.5
SPEN-205ENST00000487496 SLC47A2Q86VL8 602 aa11.92□□□□□ -0.5
SPEN-205ENST00000487496 PASD1Q8IV76 773 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms