RNA–Protein interactions for RNA: ENST00000487332.1

RNF220-215, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-215ENST00000487332 CALCAP01258 141 aa10.7□□□□□ -0.7
RNF220-215ENST00000487332 CISD3P0C7P0 127 aa10.7□□□□□ -0.7
RNF220-215ENST00000487332 NCAM1P13591 858 aa10.7□□□□□ -0.7
RNF220-215ENST00000487332 HNRNPLP14866 589 aaKnown RBP eCLIP10.7□□□□□ -0.7
RNF220-215ENST00000487332 CYP11B1P15538 503 aa10.7□□□□□ -0.7
RNF220-215ENST00000487332 KRT9P35527 623 aa10.7□□□□□ -0.7
RNF220-215ENST00000487332 USP8P40818 1118 aa10.7□□□□□ -0.7
RNF220-215ENST00000487332 GABRB2P47870 512 aa10.7□□□□□ -0.7
RNF220-215ENST00000487332 FNTBP49356 437 aa10.7□□□□□ -0.7
RNF220-215ENST00000487332 COPB1P53618 953 aaKnown RBP10.7□□□□□ -0.7
RNF220-215ENST00000487332 JAM2P57087 298 aa10.7□□□□□ -0.7
RNF220-215ENST00000487332 DMWDQ09019 674 aa10.7□□□□□ -0.7
RNF220-215ENST00000487332 MESP2Q0VG99 397 aa10.7□□□□□ -0.7
RNF220-215ENST00000487332 RAPGEF1Q13905 1077 aa10.7□□□□□ -0.7
RNF220-215ENST00000487332 CRY1Q16526 586 aa10.7□□□□□ -0.7
RNF220-215ENST00000487332 HSP90AA4PQ58FG1 418 aa10.7□□□□□ -0.7
RNF220-215ENST00000487332 EFHC1Q5JVL4 640 aa10.7□□□□□ -0.7
RNF220-215ENST00000487332 TPGS1Q6ZTW0 290 aa10.7□□□□□ -0.7
RNF220-215ENST00000487332 TOGARAM2Q6ZUX3 1019 aa10.7□□□□□ -0.7
RNF220-215ENST00000487332 SLC26A9Q7LBE3 791 aa10.7□□□□□ -0.7
RNF220-215ENST00000487332 APTXQ7Z2E3 356 aaKnown RBP10.7□□□□□ -0.7
RNF220-215ENST00000487332 ANKS1BQ7Z6G8 1248 aa10.7□□□□□ -0.7
RNF220-215ENST00000487332 SLC47A2Q86VL8 602 aa10.7□□□□□ -0.7
RNF220-215ENST00000487332 DENND1CQ8IV53 801 aa10.7□□□□□ -0.7
RNF220-215ENST00000487332 WDTC1Q8N5D0 677 aa10.7□□□□□ -0.7
RNF220-215ENST00000487332 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.7□□□□□ -0.7
RNF220-215ENST00000487332 TMEM35BQ8NCS4 154 aa10.7□□□□□ -0.7
RNF220-215ENST00000487332 EPS8L1Q8TE68 723 aa10.7□□□□□ -0.7
RNF220-215ENST00000487332 IPO4Q8TEX9 1081 aaKnown RBP10.7□□□□□ -0.7
RNF220-215ENST00000487332 CLEC4CQ8WTT0 213 aa10.7□□□□□ -0.7
RNF220-215ENST00000487332 DDX1Q92499 740 aaKnown RBP10.7□□□□□ -0.7
RNF220-215ENST00000487332 NDRG1Q92597 394 aaKnown RBP10.7□□□□□ -0.7
RNF220-215ENST00000487332 LOXL4Q96JB6 756 aa10.7□□□□□ -0.7
RNF220-215ENST00000487332 PPP1R13BQ96KQ4 1090 aa10.7□□□□□ -0.7
RNF220-215ENST00000487332 SLC2A13Q96QE2 648 aa10.7□□□□□ -0.7
RNF220-215ENST00000487332 ERGIC2Q96RQ1 377 aa10.7□□□□□ -0.7
RNF220-215ENST00000487332 CPXM1Q96SM3 734 aa10.7□□□□□ -0.7
RNF220-215ENST00000487332 DDX50Q9BQ39 737 aaKnown RBP10.7□□□□□ -0.7
RNF220-215ENST00000487332 FUCA2Q9BTY2 467 aa10.7□□□□□ -0.7
RNF220-215ENST00000487332 MIS12Q9H081 205 aa10.7□□□□□ -0.7
RNF220-215ENST00000487332 HSD3B7Q9H2F3 369 aa10.7□□□□□ -0.7
RNF220-215ENST00000487332 ACP6Q9NPH0 428 aa10.7□□□□□ -0.7
RNF220-215ENST00000487332 SFMBT1Q9UHJ3 866 aa10.7□□□□□ -0.7
RNF220-215ENST00000487332 RAB23Q9ULC3 237 aa10.7□□□□□ -0.7
RNF220-215ENST00000487332 MYH10P35580 1976 aa10.7□□□□□ -0.7
RNF220-215ENST00000487332 TBC1D3BA6NDS4 549 aa10.69□□□□□ -0.7
RNF220-215ENST00000487332 SMTNL1A8MU46 457 aa10.69□□□□□ -0.7
RNF220-215ENST00000487332 AXIN1O15169 862 aa10.69□□□□□ -0.7
RNF220-215ENST00000487332 MSI1O43347 362 aaKnown RBP10.69□□□□□ -0.7
RNF220-215ENST00000487332 HRO43593 1189 aa10.69□□□□□ -0.7
RNF220-215ENST00000487332 ACSL4O60488 711 aa10.69□□□□□ -0.7
RNF220-215ENST00000487332 DAB1O75553 588 aa10.69□□□□□ -0.7
RNF220-215ENST00000487332 RETP07949 1114 aa10.69□□□□□ -0.7
RNF220-215ENST00000487332 HMBSP08397 361 aa10.69□□□□□ -0.7
RNF220-215ENST00000487332 HOXD9P28356 352 aaPredicted RBP10.69□□□□□ -0.7
RNF220-215ENST00000487332 SLC11A2P49281 568 aa10.69□□□□□ -0.7
RNF220-215ENST00000487332 TBX4P57082 545 aa10.69□□□□□ -0.7
RNF220-215ENST00000487332 YWHAZP63104 245 aaKnown RBP10.69□□□□□ -0.7
RNF220-215ENST00000487332 ENPP2Q13822 863 aa10.69□□□□□ -0.7
RNF220-215ENST00000487332 PTPN20Q4JDL3 420 aa10.69□□□□□ -0.7
RNF220-215ENST00000487332 C10orf76Q5T2E6 689 aa10.69□□□□□ -0.7
RNF220-215ENST00000487332 ADGRF1Q5T601 910 aa10.69□□□□□ -0.7
RNF220-215ENST00000487332 OLFML1Q6UWY5 402 aa10.69□□□□□ -0.7
RNF220-215ENST00000487332 TAC4Q86UU9 113 aa10.69□□□□□ -0.7
RNF220-215ENST00000487332 SCUBE3Q8IX30 993 aa10.69□□□□□ -0.7
RNF220-215ENST00000487332 ALLCQ8N6M5 410 aa10.69□□□□□ -0.7
RNF220-215ENST00000487332 ZNF513Q8N8E2 541 aaPredicted RBP10.69□□□□□ -0.7
RNF220-215ENST00000487332 NAT16Q8N8M0 369 aa10.69□□□□□ -0.7
RNF220-215ENST00000487332 TXNDC5Q8NBS9 432 aaKnown RBP10.69□□□□□ -0.7
RNF220-215ENST00000487332 MSANTD4Q8NCY6 345 aa10.69□□□□□ -0.7
RNF220-215ENST00000487332 TSTD1Q8NFU3 115 aa10.69□□□□□ -0.7
RNF220-215ENST00000487332 WFIKKN2Q8TEU8 576 aa10.69□□□□□ -0.7
RNF220-215ENST00000487332 FAM149B1Q96BN6 582 aa10.69□□□□□ -0.7
RNF220-215ENST00000487332 PIWIL1Q96J94 861 aaKnown RBP10.69□□□□□ -0.7
RNF220-215ENST00000487332 ZC3H10Q96K80 434 aaKnown RBP10.69□□□□□ -0.7
RNF220-215ENST00000487332 FCRL2Q96LA5 508 aaPredicted RBP10.69□□□□□ -0.7
RNF220-215ENST00000487332 HHIPQ96QV1 700 aa10.69□□□□□ -0.7
RNF220-215ENST00000487332 GABRG3Q99928 467 aa10.69□□□□□ -0.7
RNF220-215ENST00000487332 VPS16Q9H269 839 aa10.69□□□□□ -0.7
RNF220-215ENST00000487332 POLMQ9NP87 494 aaPredicted RBP10.69□□□□□ -0.7
RNF220-215ENST00000487332 RRN3Q9NYV6 651 aa10.69□□□□□ -0.7
RNF220-215ENST00000487332 GMEB2Q9UKD1 530 aa10.69□□□□□ -0.7
RNF220-215ENST00000487332 USP34Q70CQ2 3546 aa10.69□□□□□ -0.7
RNF220-215ENST00000487332 MUC22E2RYF6 1773 aaPredicted RBP10.68□□□□□ -0.7
RNF220-215ENST00000487332 SGK1O00141 431 aa10.68□□□□□ -0.7
RNF220-215ENST00000487332 PIK3R2O00459 728 aa10.68□□□□□ -0.7
RNF220-215ENST00000487332 CAPN9O14815 690 aa10.68□□□□□ -0.7
RNF220-215ENST00000487332 FOXD2O60548 495 aaPredicted RBP10.68□□□□□ -0.7
RNF220-215ENST00000487332 ADAM23O75077 832 aa10.68□□□□□ -0.7
RNF220-215ENST00000487332 RPP40O75818 363 aaKnown RBP10.68□□□□□ -0.7
RNF220-215ENST00000487332 KLF8O95600 359 aaPredicted RBP10.68□□□□□ -0.7
RNF220-215ENST00000487332 APOEP02649 317 aa10.68□□□□□ -0.7
RNF220-215ENST00000487332 PNMA6AP0CW24 399 aaPredicted RBP10.68□□□□□ -0.7
RNF220-215ENST00000487332 C7P10643 843 aa10.68□□□□□ -0.7
RNF220-215ENST00000487332 SLC2A3P11169 496 aa10.68□□□□□ -0.7
RNF220-215ENST00000487332 NTSR1P30989 418 aa10.68□□□□□ -0.7
RNF220-215ENST00000487332 TIE1P35590 1138 aa10.68□□□□□ -0.7
RNF220-215ENST00000487332 SEC13P55735 322 aa10.68□□□□□ -0.7
RNF220-215ENST00000487332 GSCP56915 257 aaPredicted RBP10.68□□□□□ -0.7
RNF220-215ENST00000487332 NOMO3P69849 1222 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms