RNA–Protein interactions for RNA: ENST00000487305.5

TMEM39B-208, Transcript of transmembrane protein 39B, humanhuman

TSL 2

Gene TMEM39B, Length 2,087 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-208ENST00000487305 IRF6O14896 467 aa12.79□□□□□ -0.36
TMEM39B-208ENST00000487305 B4GALT5O43286 388 aa12.79□□□□□ -0.36
TMEM39B-208ENST00000487305 SMIM24O75264 130 aa12.79□□□□□ -0.36
TMEM39B-208ENST00000487305 ENO1P06733 434 aaKnown RBP12.79□□□□□ -0.36
TMEM39B-208ENST00000487305 ANPEPP15144 967 aa12.79□□□□□ -0.36
TMEM39B-208ENST00000487305 PGAM1P18669 254 aa12.79□□□□□ -0.36
TMEM39B-208ENST00000487305 MX2P20592 715 aa12.79□□□□□ -0.36
TMEM39B-208ENST00000487305 ACAT1P24752 427 aaKnown RBP12.79□□□□□ -0.36
TMEM39B-208ENST00000487305 RPL34P49207 117 aaKnown RBP12.79□□□□□ -0.36
TMEM39B-208ENST00000487305 CDC42EP1Q00587 391 aa12.79□□□□□ -0.36
TMEM39B-208ENST00000487305 DSG1Q02413 1049 aa12.79□□□□□ -0.36
TMEM39B-208ENST00000487305 FSTL1Q12841 308 aa12.79□□□□□ -0.36
TMEM39B-208ENST00000487305 PCBP1Q15365 356 aaKnown RBP eCLIP12.79□□□□□ -0.36
TMEM39B-208ENST00000487305 LY6KQ17RY6 165 aa12.79□□□□□ -0.36
TMEM39B-208ENST00000487305 GOLGA7BQ2TAP0 167 aa12.79□□□□□ -0.36
TMEM39B-208ENST00000487305 DCAF4L1Q3SXM0 396 aa12.79□□□□□ -0.36
TMEM39B-208ENST00000487305 CCDC153Q494R4 210 aa12.79□□□□□ -0.36
TMEM39B-208ENST00000487305 MAP3K21Q5TCX8 1036 aa12.79□□□□□ -0.36
TMEM39B-208ENST00000487305 METTL21CQ5VZV1 264 aa12.79□□□□□ -0.36
TMEM39B-208ENST00000487305 STRADAQ7RTN6 431 aa12.79□□□□□ -0.36
TMEM39B-208ENST00000487305 ALYREFQ86V81 257 aaKnown RBP12.79□□□□□ -0.36
TMEM39B-208ENST00000487305 NCAPG2Q86XI2 1143 aa12.79□□□□□ -0.36
TMEM39B-208ENST00000487305 MFN1Q8IWA4 741 aa12.79□□□□□ -0.36
TMEM39B-208ENST00000487305 TAB3Q8N5C8 712 aaPredicted RBP12.79□□□□□ -0.36
TMEM39B-208ENST00000487305 LRRC52Q8N7C0 313 aa12.79□□□□□ -0.36
TMEM39B-208ENST00000487305 UBA3Q8TBC4 463 aa12.79□□□□□ -0.36
TMEM39B-208ENST00000487305 ZNF483Q8TF39 744 aaPredicted RBP12.79□□□□□ -0.36
TMEM39B-208ENST00000487305 SLC35F5Q8WV83 523 aa12.79□□□□□ -0.36
TMEM39B-208ENST00000487305 WDR60Q8WVS4 1066 aa12.79□□□□□ -0.36
TMEM39B-208ENST00000487305 SPATA13Q96N96 652 aa12.79□□□□□ -0.36
TMEM39B-208ENST00000487305 PDZD7Q9H5P4 517 aa12.79□□□□□ -0.36
TMEM39B-208ENST00000487305 ZDHHC7Q9NXF8 308 aa12.79□□□□□ -0.36
TMEM39B-208ENST00000487305 HMGXB4Q9UGU5 601 aa12.79□□□□□ -0.36
TMEM39B-208ENST00000487305 RAD54BQ9Y620 910 aa12.79□□□□□ -0.36
TMEM39B-208ENST00000487305 C22orf31O95567 290 aa12.79□□□□□ -0.36
TMEM39B-208ENST00000487305 PFKMP08237 780 aa12.79□□□□□ -0.36
TMEM39B-208ENST00000487305 PDHA1P08559 390 aa12.79□□□□□ -0.36
TMEM39B-208ENST00000487305 CSH1P0DML2 217 aa12.79□□□□□ -0.36
TMEM39B-208ENST00000487305 CSH2P0DML3 217 aa12.79□□□□□ -0.36
TMEM39B-208ENST00000487305 L1CAMP32004 1257 aa12.79□□□□□ -0.36
TMEM39B-208ENST00000487305 CCNHP51946 323 aaPredicted RBP12.79□□□□□ -0.36
TMEM39B-208ENST00000487305 SESN3P58005 492 aa12.79□□□□□ -0.36
TMEM39B-208ENST00000487305 TTLL4Q14679 1199 aa12.79□□□□□ -0.36
TMEM39B-208ENST00000487305 AMHR2Q16671 573 aa12.79□□□□□ -0.36
TMEM39B-208ENST00000487305 C15orf59Q2T9L4 293 aaPredicted RBP12.79□□□□□ -0.36
TMEM39B-208ENST00000487305 SLC10A6Q3KNW5 377 aa12.79□□□□□ -0.36
TMEM39B-208ENST00000487305 HSDL1Q3SXM5 330 aa12.79□□□□□ -0.36
TMEM39B-208ENST00000487305 FSCBQ5H9T9 825 aa12.79□□□□□ -0.36
TMEM39B-208ENST00000487305 C1orf146Q5VVC0 180 aa12.79□□□□□ -0.36
TMEM39B-208ENST00000487305 TRNP1Q6NT89 227 aa12.79□□□□□ -0.36
TMEM39B-208ENST00000487305 TTC7BQ86TV6 843 aa12.79□□□□□ -0.36
TMEM39B-208ENST00000487305 CEP120Q8N960 986 aa12.79□□□□□ -0.36
TMEM39B-208ENST00000487305 TFB1MQ8WVM0 346 aaKnown RBP12.79□□□□□ -0.36
TMEM39B-208ENST00000487305 NRG4Q8WWG1 115 aa12.79□□□□□ -0.36
TMEM39B-208ENST00000487305 PPP2R3CQ969Q6 453 aa12.79□□□□□ -0.36
TMEM39B-208ENST00000487305 C11orf84Q9BUA3 381 aaPredicted RBP12.79□□□□□ -0.36
TMEM39B-208ENST00000487305 PLAC1Q9HBJ0 212 aa12.79□□□□□ -0.36
TMEM39B-208ENST00000487305 PCMTD2Q9NV79 361 aa12.79□□□□□ -0.36
TMEM39B-208ENST00000487305 MID2Q9UJV3 735 aa12.79□□□□□ -0.36
TMEM39B-208ENST00000487305 SCAF8Q9UPN6 1271 aaKnown RBP12.79□□□□□ -0.36
TMEM39B-208ENST00000487305 SCN4AP35499 1836 aa12.78□□□□□ -0.36
TMEM39B-208ENST00000487305 CCNT2O60583 730 aaKnown RBP12.78□□□□□ -0.36
TMEM39B-208ENST00000487305 PIAS1O75925 651 aa12.78□□□□□ -0.36
TMEM39B-208ENST00000487305 ARL4AP40617 200 aa12.78□□□□□ -0.36
TMEM39B-208ENST00000487305 GRM5P41594 1212 aa12.78□□□□□ -0.36
TMEM39B-208ENST00000487305 COPAP53621 1224 aa12.78□□□□□ -0.36
TMEM39B-208ENST00000487305 HIRAP54198 1017 aaPredicted RBP12.78□□□□□ -0.36
TMEM39B-208ENST00000487305 ROR2Q01974 943 aaKnown RBP12.78□□□□□ -0.36
TMEM39B-208ENST00000487305 HNRNPDQ14103 355 aaKnown RBP12.78□□□□□ -0.36
TMEM39B-208ENST00000487305 FASTKD1Q53R41 847 aaKnown RBP12.78□□□□□ -0.36
TMEM39B-208ENST00000487305 MAP1SQ66K74 1059 aaPredicted RBP12.78□□□□□ -0.36
TMEM39B-208ENST00000487305 MBLAC2Q68D91 279 aa12.78□□□□□ -0.36
TMEM39B-208ENST00000487305 OR52E8Q6IFG1 317 aa12.78□□□□□ -0.36
TMEM39B-208ENST00000487305 RIPOR1Q6ZS17 1223 aa12.78□□□□□ -0.36
TMEM39B-208ENST00000487305 ZNF534Q76KX8 674 aa12.78□□□□□ -0.36
TMEM39B-208ENST00000487305 LCA5Q86VQ0 697 aa12.78□□□□□ -0.36
TMEM39B-208ENST00000487305 TREML1Q86YW5 311 aa12.78□□□□□ -0.36
TMEM39B-208ENST00000487305 CCDC33Q8N5R6 958 aa12.78□□□□□ -0.36
TMEM39B-208ENST00000487305 HTR3CQ8WXA8 447 aa12.78□□□□□ -0.36
TMEM39B-208ENST00000487305 HSFY1Q96LI6 401 aa12.78□□□□□ -0.36
TMEM39B-208ENST00000487305 SYT15Q9BQS2 421 aa12.78□□□□□ -0.36
TMEM39B-208ENST00000487305 DLGAP2Q9P1A6 1054 aa12.78□□□□□ -0.36
TMEM39B-208ENST00000487305 BTBD7Q9P203 1132 aa12.78□□□□□ -0.36
TMEM39B-208ENST00000487305 ARMCX1Q9P291 453 aa12.78□□□□□ -0.36
TMEM39B-208ENST00000487305 CDY2AQ9Y6F7 541 aa12.78□□□□□ -0.36
TMEM39B-208ENST00000487305 CDY1Q9Y6F8 540 aa12.78□□□□□ -0.36
TMEM39B-208ENST00000487305 ASB14A6NK59 587 aa12.77□□□□□ -0.36
TMEM39B-208ENST00000487305 AP3B1O00203 1094 aa12.77□□□□□ -0.36
TMEM39B-208ENST00000487305 SLC22A2O15244 555 aa12.77□□□□□ -0.36
TMEM39B-208ENST00000487305 DGKIO75912 1065 aa12.77□□□□□ -0.36
TMEM39B-208ENST00000487305 HADHAP40939 763 aa12.77□□□□□ -0.36
TMEM39B-208ENST00000487305 SLC1A6P48664 564 aa12.77□□□□□ -0.36
TMEM39B-208ENST00000487305 PRKAA2P54646 552 aa12.77□□□□□ -0.36
TMEM39B-208ENST00000487305 HDAC4P56524 1084 aa12.77□□□□□ -0.36
TMEM39B-208ENST00000487305 DEUP1Q05D60 604 aa12.77□□□□□ -0.36
TMEM39B-208ENST00000487305 NIPAL4Q0D2K0 466 aa12.77□□□□□ -0.36
TMEM39B-208ENST00000487305 LAMC2Q13753 1193 aa12.77□□□□□ -0.36
TMEM39B-208ENST00000487305 CDO1Q16878 200 aa12.77□□□□□ -0.36
TMEM39B-208ENST00000487305 EFHC1Q5JVL4 640 aa12.77□□□□□ -0.36
TMEM39B-208ENST00000487305 GRTP1Q5TC63 336 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms