RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 PRCCQ92733 491 aaPredicted RBP20.42■□□□□ 0.86
SMPDL3A-202ENST00000487215 PIWIL1Q96J94 861 aaKnown RBP20.42■□□□□ 0.86
SMPDL3A-202ENST00000487215 APOBEC3GQ9HC16 384 aaKnown RBP20.42■□□□□ 0.86
SMPDL3A-202ENST00000487215 TM7SF3Q9NS93 570 aa20.42■□□□□ 0.86
SMPDL3A-202ENST00000487215 FNDC3AQ9Y2H6 1198 aaKnown RBP20.42■□□□□ 0.86
SMPDL3A-202ENST00000487215 USP3Q9Y6I4 520 aa20.42■□□□□ 0.86
SMPDL3A-202ENST00000487215 ADAMTS20P59510 1910 aa20.42■□□□□ 0.86
SMPDL3A-202ENST00000487215 MYH10P35580 1976 aa20.42■□□□□ 0.86
SMPDL3A-202ENST00000487215 LAMA5O15230 3695 aa20.41■□□□□ 0.86
SMPDL3A-202ENST00000487215 CILPO75339 1184 aa20.41■□□□□ 0.86
SMPDL3A-202ENST00000487215 KIF20AO95235 890 aa20.41■□□□□ 0.86
SMPDL3A-202ENST00000487215 CER1O95813 267 aa20.41■□□□□ 0.86
SMPDL3A-202ENST00000487215 PRKCHP24723 683 aa20.41■□□□□ 0.86
SMPDL3A-202ENST00000487215 MATKP42679 507 aa20.41■□□□□ 0.86
SMPDL3A-202ENST00000487215 COG7P83436 770 aa20.41■□□□□ 0.86
SMPDL3A-202ENST00000487215 EFEMP1Q12805 493 aa20.41■□□□□ 0.86
SMPDL3A-202ENST00000487215 COL28A1Q2UY09 1125 aa20.41■□□□□ 0.86
SMPDL3A-202ENST00000487215 RESP18Q5W5W9 173 aa20.41■□□□□ 0.86
SMPDL3A-202ENST00000487215 CEP135Q66GS9 1140 aa20.41■□□□□ 0.86
SMPDL3A-202ENST00000487215 PDZD3Q86UT5 571 aa20.41■□□□□ 0.86
SMPDL3A-202ENST00000487215 RBBP8NLQ8NC74 664 aaPredicted RBP20.41■□□□□ 0.86
SMPDL3A-202ENST00000487215 BAHD1Q8TBE0 780 aaPredicted RBP20.41■□□□□ 0.86
SMPDL3A-202ENST00000487215 CDK5RAP1Q96SZ6 601 aaKnown RBP20.41■□□□□ 0.86
SMPDL3A-202ENST00000487215 DUSP16Q9BY84 665 aa20.41■□□□□ 0.86
SMPDL3A-202ENST00000487215 DCLK3Q9C098 648 aa20.41■□□□□ 0.86
SMPDL3A-202ENST00000487215 CYP3A43Q9HB55 503 aa20.41■□□□□ 0.86
SMPDL3A-202ENST00000487215 EXOC1Q9NV70 894 aa20.41■□□□□ 0.86
SMPDL3A-202ENST00000487215 ELOVL2Q9NXB9 296 aa20.41■□□□□ 0.86
SMPDL3A-202ENST00000487215 KIAA1522Q9P206 1035 aaPredicted RBP20.41■□□□□ 0.86
SMPDL3A-202ENST00000487215 EIF2B4Q9UI10 523 aaKnown RBP20.41■□□□□ 0.86
SMPDL3A-202ENST00000487215 AGO1Q9UL18 857 aaKnown RBP20.41■□□□□ 0.86
SMPDL3A-202ENST00000487215 CLEC4EQ9ULY5 219 aa20.41■□□□□ 0.86
SMPDL3A-202ENST00000487215 PCDHA7Q9UN72 937 aa20.41■□□□□ 0.86
SMPDL3A-202ENST00000487215 ANKRD11Q6UB99 2663 aaPredicted RBP20.41■□□□□ 0.86
SMPDL3A-202ENST00000487215 PDXKO00764 312 aa20.4■□□□□ 0.86
SMPDL3A-202ENST00000487215 CD58P19256 250 aa20.4■□□□□ 0.86
SMPDL3A-202ENST00000487215 EIF4HQ15056 248 aaKnown RBP20.4■□□□□ 0.86
SMPDL3A-202ENST00000487215 HLA-BQ31612 363 aa20.4■□□□□ 0.86
SMPDL3A-202ENST00000487215 FOXD4L6Q3SYB3 417 aaPredicted RBP20.4■□□□□ 0.86
SMPDL3A-202ENST00000487215 KMT5BQ4FZB7 885 aa20.4■□□□□ 0.86
SMPDL3A-202ENST00000487215 PPP1R26Q5T8A7 1209 aaPredicted RBP20.4■□□□□ 0.86
SMPDL3A-202ENST00000487215 FOXD4L5Q5VV16 416 aaPredicted RBP20.4■□□□□ 0.86
SMPDL3A-202ENST00000487215 IL27RAQ6UWB1 636 aa20.4■□□□□ 0.86
SMPDL3A-202ENST00000487215 FOXD4L3Q6VB84 417 aaPredicted RBP20.4■□□□□ 0.86
SMPDL3A-202ENST00000487215 CEP57L1Q8IYX8 460 aa20.4■□□□□ 0.86
SMPDL3A-202ENST00000487215 C1orf216Q8TAB5 229 aa20.4■□□□□ 0.86
SMPDL3A-202ENST00000487215 FOXD4L4Q8WXT5 416 aaPredicted RBP20.4■□□□□ 0.86
SMPDL3A-202ENST00000487215 SORCS1Q8WY21 1168 aa20.4■□□□□ 0.86
SMPDL3A-202ENST00000487215 NUP58Q9BVL2 599 aa20.4■□□□□ 0.86
SMPDL3A-202ENST00000487215 IMPG2Q9BZV3 1241 aa20.4■□□□□ 0.86
SMPDL3A-202ENST00000487215 TOR4AQ9NXH8 423 aa20.4■□□□□ 0.86
SMPDL3A-202ENST00000487215 SERTAD1Q9UHV2 236 aa20.4■□□□□ 0.86
SMPDL3A-202ENST00000487215 PLXNB3Q9ULL4 1909 aa20.4■□□□□ 0.86
SMPDL3A-202ENST00000487215 K7ELQ4 463 aaPredicted RBP20.39■□□□□ 0.85
SMPDL3A-202ENST00000487215 ACADMP11310 421 aa20.39■□□□□ 0.85
SMPDL3A-202ENST00000487215 ME1P48163 572 aa20.39■□□□□ 0.85
SMPDL3A-202ENST00000487215 VAMP7P51809 220 aa20.39■□□□□ 0.85
SMPDL3A-202ENST00000487215 SOWAHCQ53LP3 525 aaPredicted RBP20.39■□□□□ 0.85
SMPDL3A-202ENST00000487215 TMEM215Q68D42 235 aa20.39■□□□□ 0.85
SMPDL3A-202ENST00000487215 DBX2Q6ZNG2 339 aa20.39■□□□□ 0.85
SMPDL3A-202ENST00000487215 DENND1CQ8IV53 801 aa20.39■□□□□ 0.85
SMPDL3A-202ENST00000487215 TAS1R2Q8TE23 839 aa20.39■□□□□ 0.85
SMPDL3A-202ENST00000487215 CIPCQ9C0C6 399 aa20.39■□□□□ 0.85
SMPDL3A-202ENST00000487215 NIF3L1Q9GZT8 377 aa20.39■□□□□ 0.85
SMPDL3A-202ENST00000487215 FRMD4BQ9Y2L6 1034 aa20.39■□□□□ 0.85
SMPDL3A-202ENST00000487215 SLCO1B1Q9Y6L6 691 aa20.39■□□□□ 0.85
SMPDL3A-202ENST00000487215 FASNP49327 2511 aaKnown RBP20.38■□□□□ 0.85
SMPDL3A-202ENST00000487215 A0A1B0GVT2 93 aa20.38■□□□□ 0.85
SMPDL3A-202ENST00000487215 ACTN4O43707 911 aaKnown RBP20.38■□□□□ 0.85
SMPDL3A-202ENST00000487215 CYBBP04839 570 aa20.38■□□□□ 0.85
SMPDL3A-202ENST00000487215 EPHX1P07099 455 aa20.38■□□□□ 0.85
SMPDL3A-202ENST00000487215 SLFN14P0C7P3 912 aa20.38■□□□□ 0.85
SMPDL3A-202ENST00000487215 TRIM49P0CI25 452 aa20.38■□□□□ 0.85
SMPDL3A-202ENST00000487215 TRIM49CP0CI26 452 aa20.38■□□□□ 0.85
SMPDL3A-202ENST00000487215 E2F5Q15329 346 aa20.38■□□□□ 0.85
SMPDL3A-202ENST00000487215 SERPINA13PQ6UXR4 307 aa20.38■□□□□ 0.85
SMPDL3A-202ENST00000487215 TMPRSS7Q7RTY8 843 aa20.38■□□□□ 0.85
SMPDL3A-202ENST00000487215 FAM124AQ86V42 546 aa20.38■□□□□ 0.85
SMPDL3A-202ENST00000487215 CPXM2Q8N436 756 aa20.38■□□□□ 0.85
SMPDL3A-202ENST00000487215 PAGE5Q96GU1 130 aa20.38■□□□□ 0.85
SMPDL3A-202ENST00000487215 MARCH2Q9P0N8 246 aa20.38■□□□□ 0.85
SMPDL3A-202ENST00000487215 RAXQ9Y2V3 346 aa20.38■□□□□ 0.85
SMPDL3A-202ENST00000487215 PCDHGB2Q9Y5G2 931 aa20.38■□□□□ 0.85
SMPDL3A-202ENST00000487215 FLRT2O43155 660 aa20.37■□□□□ 0.85
SMPDL3A-202ENST00000487215 DKK1O94907 266 aa20.37■□□□□ 0.85
SMPDL3A-202ENST00000487215 ATXN1LP0C7T5 689 aaKnown RBP20.37■□□□□ 0.85
SMPDL3A-202ENST00000487215 GCLMP48507 274 aa20.37■□□□□ 0.85
SMPDL3A-202ENST00000487215 PPP3CAQ08209 521 aa20.37■□□□□ 0.85
SMPDL3A-202ENST00000487215 ZNF394Q53GI3 561 aa20.37■□□□□ 0.85
SMPDL3A-202ENST00000487215 RHBDD1Q8TEB9 315 aa20.37■□□□□ 0.85
SMPDL3A-202ENST00000487215 DDI1Q8WTU0 396 aa20.37■□□□□ 0.85
SMPDL3A-202ENST00000487215 SLC2A11Q9BYW1 496 aa20.37■□□□□ 0.85
SMPDL3A-202ENST00000487215 PCED1AQ9H1Q7 454 aa20.37■□□□□ 0.85
SMPDL3A-202ENST00000487215 STRIP2Q9ULQ0 834 aa20.37■□□□□ 0.85
SMPDL3A-202ENST00000487215 CKAP5Q14008 2032 aa20.36■□□□□ 0.85
SMPDL3A-202ENST00000487215 SLC12A8A0AV02 714 aa20.36■□□□□ 0.85
SMPDL3A-202ENST00000487215 MAPK13O15264 365 aa20.36■□□□□ 0.85
SMPDL3A-202ENST00000487215 CALUO43852 315 aaPredicted RBP20.36■□□□□ 0.85
SMPDL3A-202ENST00000487215 PDIA4P13667 645 aaKnown RBP20.36■□□□□ 0.85
SMPDL3A-202ENST00000487215 HLA-EP13747 358 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms