RNA–Protein interactions for RNA: ENST00000487150.2

LIMS3-205, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 3 BASIC

Gene LIMS3, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-205ENST00000487150 MYBL1P10243 752 aa15.24■□□□□ 0.03
LIMS3-205ENST00000487150 GZMAP12544 262 aa15.24■□□□□ 0.03
LIMS3-205ENST00000487150 TARSP26639 723 aaKnown RBP15.24■□□□□ 0.03
LIMS3-205ENST00000487150 AVPR2P30518 371 aa15.24■□□□□ 0.03
LIMS3-205ENST00000487150 CCR1P32246 355 aa15.24■□□□□ 0.03
LIMS3-205ENST00000487150 PPP2R5DQ14738 602 aa15.24■□□□□ 0.03
LIMS3-205ENST00000487150 TMEM196Q5HYL7 178 aa15.24■□□□□ 0.03
LIMS3-205ENST00000487150 LY6G5CQ5SRR4 150 aa15.24■□□□□ 0.03
LIMS3-205ENST00000487150 ACAD10Q6JQN1 1059 aa15.24■□□□□ 0.03
LIMS3-205ENST00000487150 MON1BQ7L1V2 547 aa15.24■□□□□ 0.03
LIMS3-205ENST00000487150 DENND1CQ8IV53 801 aa15.24■□□□□ 0.03
LIMS3-205ENST00000487150 FAM217AQ8IXS0 508 aa15.24■□□□□ 0.03
LIMS3-205ENST00000487150 DRC7Q8IY82 874 aa15.24■□□□□ 0.03
LIMS3-205ENST00000487150 CCDC105Q8IYK2 499 aa15.24■□□□□ 0.03
LIMS3-205ENST00000487150 DEFB106AQ8N104 65 aa15.24■□□□□ 0.03
LIMS3-205ENST00000487150 C3orf20Q8ND61 904 aa15.24■□□□□ 0.03
LIMS3-205ENST00000487150 CD101Q93033 1021 aa15.24■□□□□ 0.03
LIMS3-205ENST00000487150 SYT11Q9BT88 431 aa15.24■□□□□ 0.03
LIMS3-205ENST00000487150 BBS2Q9BXC9 721 aa15.24■□□□□ 0.03
LIMS3-205ENST00000487150 FOXQ1Q9C009 403 aa15.24■□□□□ 0.03
LIMS3-205ENST00000487150 IRF2BPLQ9H1B7 796 aa15.24■□□□□ 0.03
LIMS3-205ENST00000487150 LINC00597Q9H2U6 94 aa15.24■□□□□ 0.03
LIMS3-205ENST00000487150 HAUS4Q9H6D7 363 aa15.24■□□□□ 0.03
LIMS3-205ENST00000487150 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.24■□□□□ 0.03
LIMS3-205ENST00000487150 DDIT4Q9NX09 232 aa15.24■□□□□ 0.03
LIMS3-205ENST00000487150 TJP2Q9UDY2 1190 aa15.24■□□□□ 0.03
LIMS3-205ENST00000487150 AGO1Q9UL18 857 aaKnown RBP15.24■□□□□ 0.03
LIMS3-205ENST00000487150 NDRG2Q9UN36 371 aaKnown RBP15.24■□□□□ 0.03
LIMS3-205ENST00000487150 ZNF638Q14966 1978 aaKnown RBP15.24■□□□□ 0.03
LIMS3-205ENST00000487150 CACNG3O60359 315 aa15.23■□□□□ 0.03
LIMS3-205ENST00000487150 IGLV3-25P01717 112 aa15.23■□□□□ 0.03
LIMS3-205ENST00000487150 FYNP06241 537 aa15.23■□□□□ 0.03
LIMS3-205ENST00000487150 ABCB4P21439 1286 aa15.23■□□□□ 0.03
LIMS3-205ENST00000487150 HNRNPH3P31942 346 aaKnown RBP15.23■□□□□ 0.03
LIMS3-205ENST00000487150 CASP14P31944 242 aa15.23■□□□□ 0.03
LIMS3-205ENST00000487150 SOX9P48436 509 aa15.23■□□□□ 0.03
LIMS3-205ENST00000487150 ANO4Q32M45 955 aa15.23■□□□□ 0.03
LIMS3-205ENST00000487150 SLC25A52Q3SY17 297 aa15.23■□□□□ 0.03
LIMS3-205ENST00000487150 ADGRF1Q5T601 910 aa15.23■□□□□ 0.03
LIMS3-205ENST00000487150 DNAJC24Q6P3W2 148 aa15.23■□□□□ 0.03
LIMS3-205ENST00000487150 RHBDF2Q6PJF5 856 aa15.23■□□□□ 0.03
LIMS3-205ENST00000487150 ATP6V0D2Q8N8Y2 350 aa15.23■□□□□ 0.03
LIMS3-205ENST00000487150 OR8K1Q8NGG5 319 aa15.23■□□□□ 0.03
LIMS3-205ENST00000487150 SLC30A5Q8TAD4 765 aa15.23■□□□□ 0.03
LIMS3-205ENST00000487150 TTC8Q8TAM2 541 aa15.23■□□□□ 0.03
LIMS3-205ENST00000487150 CPLX3Q8WVH0 158 aa15.23■□□□□ 0.03
LIMS3-205ENST00000487150 RNF34Q969K3 372 aa15.23■□□□□ 0.03
LIMS3-205ENST00000487150 CLDN23Q96B33 292 aa15.23■□□□□ 0.03
LIMS3-205ENST00000487150 PGAP3Q96FM1 320 aaPredicted RBP15.23■□□□□ 0.03
LIMS3-205ENST00000487150 PIWIL1Q96J94 861 aaKnown RBP15.23■□□□□ 0.03
LIMS3-205ENST00000487150 BTN2A3PQ96KV6 586 aa15.23■□□□□ 0.03
LIMS3-205ENST00000487150 SELENOOQ9BVL4 669 aa15.23■□□□□ 0.03
LIMS3-205ENST00000487150 ANAPC1Q9H1A4 1944 aa15.23■□□□□ 0.03
LIMS3-205ENST00000487150 KIF26AQ9ULI4 1882 aaPredicted RBP15.23■□□□□ 0.03
LIMS3-205ENST00000487150 OTOL1A6NHN0 477 aaPredicted RBP15.22■□□□□ 0.03
LIMS3-205ENST00000487150 NEDD8-MDP1E9PL57 170 aa15.22■□□□□ 0.03
LIMS3-205ENST00000487150 GOLGA8SH3BPF8 625 aa15.22■□□□□ 0.03
LIMS3-205ENST00000487150 SCAMP3O14828 347 aaKnown RBP15.22■□□□□ 0.03
LIMS3-205ENST00000487150 GRAP2O75791 330 aa15.22■□□□□ 0.03
LIMS3-205ENST00000487150 KLKB1P03952 638 aa15.22■□□□□ 0.03
LIMS3-205ENST00000487150 APODP05090 189 aa15.22■□□□□ 0.03
LIMS3-205ENST00000487150 KRT3P12035 628 aa15.22■□□□□ 0.03
LIMS3-205ENST00000487150 SDC4P31431 198 aa15.22■□□□□ 0.03
LIMS3-205ENST00000487150 PON2Q15165 354 aa15.22■□□□□ 0.03
LIMS3-205ENST00000487150 MPPE1Q53F39 396 aa15.22■□□□□ 0.03
LIMS3-205ENST00000487150 BRMS1LQ5PSV4 323 aa15.22■□□□□ 0.03
LIMS3-205ENST00000487150 MPP7Q5T2T1 576 aa15.22■□□□□ 0.03
LIMS3-205ENST00000487150 SYPL2Q5VXT5 272 aa15.22■□□□□ 0.03
LIMS3-205ENST00000487150 CCDC117Q8IWD4 279 aaPredicted RBP15.22■□□□□ 0.03
LIMS3-205ENST00000487150 SLC39A13Q96H72 371 aa15.22■□□□□ 0.03
LIMS3-205ENST00000487150 MRFAP1L1Q96HT8 127 aa15.22■□□□□ 0.03
LIMS3-205ENST00000487150 PNKPQ96T60 521 aa15.22■□□□□ 0.03
LIMS3-205ENST00000487150 PCDHB18PQ96TA0 734 aa15.22■□□□□ 0.03
LIMS3-205ENST00000487150 DNAJC7Q99615 494 aa15.22■□□□□ 0.03
LIMS3-205ENST00000487150 SLC2A11Q9BYW1 496 aa15.22■□□□□ 0.03
LIMS3-205ENST00000487150 RBSNQ9H1K0 784 aa15.22■□□□□ 0.03
LIMS3-205ENST00000487150 CHRDQ9H2X0 955 aa15.22■□□□□ 0.03
LIMS3-205ENST00000487150 METTL5Q9NRN9 209 aaKnown RBP15.22■□□□□ 0.03
LIMS3-205ENST00000487150 DEC1Q9P2X7 70 aa15.22■□□□□ 0.03
LIMS3-205ENST00000487150 SCINQ9Y6U3 715 aa15.22■□□□□ 0.03
LIMS3-205ENST00000487150 MYO10Q9HD67 2058 aa15.21■□□□□ 0.03
LIMS3-205ENST00000487150 HELZP42694 1942 aaKnown RBP15.21■□□□□ 0.03
LIMS3-205ENST00000487150 M0QYT0 321 aa15.21■□□□□ 0.03
LIMS3-205ENST00000487150 ACSL4O60488 711 aa15.21■□□□□ 0.03
LIMS3-205ENST00000487150 MFAP3LO75121 409 aa15.21■□□□□ 0.03
LIMS3-205ENST00000487150 ATG13O75143 517 aa15.21■□□□□ 0.03
LIMS3-205ENST00000487150 RTN2O75298 545 aa15.21■□□□□ 0.03
LIMS3-205ENST00000487150 PENKP01210 267 aaPredicted RBP15.21■□□□□ 0.03
LIMS3-205ENST00000487150 TYRP14679 529 aa15.21■□□□□ 0.03
LIMS3-205ENST00000487150 CD72P21854 359 aa15.21■□□□□ 0.03
LIMS3-205ENST00000487150 HOXD11P31277 338 aaPredicted RBP15.21■□□□□ 0.03
LIMS3-205ENST00000487150 RDXP35241 583 aaKnown RBP15.21■□□□□ 0.03
LIMS3-205ENST00000487150 GRIA2P42262 883 aa15.21■□□□□ 0.03
LIMS3-205ENST00000487150 SULT1E1P49888 294 aa15.21■□□□□ 0.03
LIMS3-205ENST00000487150 RNASE9P60153 205 aaKnown RBP15.21■□□□□ 0.03
LIMS3-205ENST00000487150 CCINQ13939 588 aa15.21■□□□□ 0.03
LIMS3-205ENST00000487150 ARID5BQ14865 1188 aa15.21■□□□□ 0.03
LIMS3-205ENST00000487150 TAF5Q15542 800 aa15.21■□□□□ 0.03
LIMS3-205ENST00000487150 HSF5Q4G112 596 aaPredicted RBP15.21■□□□□ 0.03
LIMS3-205ENST00000487150 IER5LQ5T953 404 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms