RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 CLCN2P51788 898 aa4.09□□□□□ -1.75
SNRNP27-204ENST00000487029 POLGP54098 1239 aaPredicted RBP4.09□□□□□ -1.75
SNRNP27-204ENST00000487029 LINC00205P59089 165 aa4.09□□□□□ -1.75
SNRNP27-204ENST00000487029 PPFIA1Q13136 1202 aa4.09□□□□□ -1.75
SNRNP27-204ENST00000487029 FHL3Q13643 280 aa4.09□□□□□ -1.75
SNRNP27-204ENST00000487029 SULT6B1Q6IMI4 303 aa4.09□□□□□ -1.75
SNRNP27-204ENST00000487029 JMJD6Q6NYC1 403 aaPredicted RBP4.09□□□□□ -1.75
SNRNP27-204ENST00000487029 KLHL17Q6TDP4 642 aa4.09□□□□□ -1.75
SNRNP27-204ENST00000487029 CLEC9AQ6UXN8 241 aa4.09□□□□□ -1.75
SNRNP27-204ENST00000487029 RFX8Q6ZV50 586 aa4.09□□□□□ -1.75
SNRNP27-204ENST00000487029 CAND1Q86VP6 1230 aaKnown RBP4.09□□□□□ -1.75
SNRNP27-204ENST00000487029 TTC30AQ86WT1 665 aa4.09□□□□□ -1.75
SNRNP27-204ENST00000487029 RAB11FIP4Q86YS3 637 aa4.09□□□□□ -1.75
SNRNP27-204ENST00000487029 ZDHHC17Q8IUH5 632 aa4.09□□□□□ -1.75
SNRNP27-204ENST00000487029 NRSN1Q8IZ57 195 aa4.09□□□□□ -1.75
SNRNP27-204ENST00000487029 FSTL5Q8N475 847 aaPredicted RBP4.09□□□□□ -1.75
SNRNP27-204ENST00000487029 OTUD7AQ8TE49 926 aaPredicted RBP4.09□□□□□ -1.75
SNRNP27-204ENST00000487029 GCC1Q96CN9 775 aa4.09□□□□□ -1.75
SNRNP27-204ENST00000487029 REPS1Q96D71 796 aa4.09□□□□□ -1.75
SNRNP27-204ENST00000487029 RSPRY1Q96DX4 576 aa4.09□□□□□ -1.75
SNRNP27-204ENST00000487029 WDR24Q96S15 920 aa4.09□□□□□ -1.75
SNRNP27-204ENST00000487029 NUDT22Q9BRQ3 303 aa4.09□□□□□ -1.75
SNRNP27-204ENST00000487029 EHD3Q9NZN3 535 aa4.09□□□□□ -1.75
SNRNP27-204ENST00000487029 STEAP1Q9UHE8 339 aa4.09□□□□□ -1.75
SNRNP27-204ENST00000487029 SH2B3Q9UQQ2 575 aa4.09□□□□□ -1.75
SNRNP27-204ENST00000487029 SLC27A6Q9Y2P4 619 aa4.09□□□□□ -1.75
SNRNP27-204ENST00000487029 PNMA6EA0A0J9YXQ4 647 aa4.08□□□□□ -1.76
SNRNP27-204ENST00000487029 J3KTA2 159 aa4.08□□□□□ -1.76
SNRNP27-204ENST00000487029 PSMD9O00233 223 aa4.08□□□□□ -1.76
SNRNP27-204ENST00000487029 IPO5O00410 1097 aaKnown RBP4.08□□□□□ -1.76
SNRNP27-204ENST00000487029 EXOC5O00471 708 aa4.08□□□□□ -1.76
SNRNP27-204ENST00000487029 IRAK2O43187 625 aa4.08□□□□□ -1.76
SNRNP27-204ENST00000487029 DHHO43323 396 aa4.08□□□□□ -1.76
SNRNP27-204ENST00000487029 DNPH1O43598 174 aa4.08□□□□□ -1.76
SNRNP27-204ENST00000487029 URI1O94763 535 aaPredicted RBP4.08□□□□□ -1.76
SNRNP27-204ENST00000487029 ACTL6BO94805 426 aa4.08□□□□□ -1.76
SNRNP27-204ENST00000487029 WDR47O94967 919 aa4.08□□□□□ -1.76
SNRNP27-204ENST00000487029 VNN1O95497 513 aa4.08□□□□□ -1.76
SNRNP27-204ENST00000487029 FESP07332 822 aa4.08□□□□□ -1.76
SNRNP27-204ENST00000487029 IL6RP08887 468 aaPredicted RBP4.08□□□□□ -1.76
SNRNP27-204ENST00000487029 SNHG28P0DPA3 235 aa4.08□□□□□ -1.76
SNRNP27-204ENST00000487029 NR2F6P10588 404 aa4.08□□□□□ -1.76
SNRNP27-204ENST00000487029 CERS1P27544 350 aa4.08□□□□□ -1.76
SNRNP27-204ENST00000487029 LIPAP38571 399 aa4.08□□□□□ -1.76
SNRNP27-204ENST00000487029 ARL4CP56559 192 aa4.08□□□□□ -1.76
SNRNP27-204ENST00000487029 BMPR2Q13873 1038 aa4.08□□□□□ -1.76
SNRNP27-204ENST00000487029 TIGD6Q17RP2 521 aa4.08□□□□□ -1.76
SNRNP27-204ENST00000487029 TREML2Q5T2D2 321 aa4.08□□□□□ -1.76
SNRNP27-204ENST00000487029 ANKRD18AQ8IVF6 992 aa4.08□□□□□ -1.76
SNRNP27-204ENST00000487029 CCDC117Q8IWD4 279 aaPredicted RBP4.08□□□□□ -1.76
SNRNP27-204ENST00000487029 METTL25Q8N6Q8 603 aa4.08□□□□□ -1.76
SNRNP27-204ENST00000487029 C11orf44Q8N8P7 122 aa4.08□□□□□ -1.76
SNRNP27-204ENST00000487029 OR1N1Q8NGS0 311 aa4.08□□□□□ -1.76
SNRNP27-204ENST00000487029 SUN3Q8TAQ9 357 aa4.08□□□□□ -1.76
SNRNP27-204ENST00000487029 RSC1A1Q92681 617 aa4.08□□□□□ -1.76
SNRNP27-204ENST00000487029 R3HDM4Q96D70 268 aa4.08□□□□□ -1.76
SNRNP27-204ENST00000487029 PBKQ96KB5 322 aa4.08□□□□□ -1.76
SNRNP27-204ENST00000487029 RTKNQ9BST9 563 aa4.08□□□□□ -1.76
SNRNP27-204ENST00000487029 EPS8L2Q9H6S3 715 aa4.08□□□□□ -1.76
SNRNP27-204ENST00000487029 DKK3Q9UBP4 350 aa4.08□□□□□ -1.76
SNRNP27-204ENST00000487029 NKX1-2Q9UD57 310 aaPredicted RBP4.08□□□□□ -1.76
SNRNP27-204ENST00000487029 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.08□□□□□ -1.76
SNRNP27-204ENST00000487029 PRR23D1E9PI22 279 aaPredicted RBP4.07□□□□□ -1.76
SNRNP27-204ENST00000487029 M0R3H8 397 aa4.07□□□□□ -1.76
SNRNP27-204ENST00000487029 CBFA2T3O75081 653 aa4.07□□□□□ -1.76
SNRNP27-204ENST00000487029 TTLL1O95922 423 aa4.07□□□□□ -1.76
SNRNP27-204ENST00000487029 PRKCBP05771 671 aa4.07□□□□□ -1.76
SNRNP27-204ENST00000487029 PRR23D2P0DMB1 279 aaPredicted RBP4.07□□□□□ -1.76
SNRNP27-204ENST00000487029 GYS1P13807 737 aa4.07□□□□□ -1.76
SNRNP27-204ENST00000487029 ZFXP17010 805 aaPredicted RBP4.07□□□□□ -1.76
SNRNP27-204ENST00000487029 YY1P25490 414 aa4.07□□□□□ -1.76
SNRNP27-204ENST00000487029 KLRK1P26718 216 aa4.07□□□□□ -1.76
SNRNP27-204ENST00000487029 CCKARP32238 428 aa4.07□□□□□ -1.76
SNRNP27-204ENST00000487029 PNLIPRP1P54315 467 aa4.07□□□□□ -1.76
SNRNP27-204ENST00000487029 EIF4A1P60842 406 aaKnown RBP4.07□□□□□ -1.76
SNRNP27-204ENST00000487029 AP2B1P63010 937 aa4.07□□□□□ -1.76
SNRNP27-204ENST00000487029 CSHL1Q14406 222 aa4.07□□□□□ -1.76
SNRNP27-204ENST00000487029 GRM4Q14833 912 aa4.07□□□□□ -1.76
SNRNP27-204ENST00000487029 ACOX1Q15067 660 aa4.07□□□□□ -1.76
SNRNP27-204ENST00000487029 RABEP1Q15276 862 aa4.07□□□□□ -1.76
SNRNP27-204ENST00000487029 ST3GAL2Q16842 350 aa4.07□□□□□ -1.76
SNRNP27-204ENST00000487029 ATPAF1Q5TC12 328 aaPredicted RBP4.07□□□□□ -1.76
SNRNP27-204ENST00000487029 KRTAP5-1Q6L8H4 278 aa4.07□□□□□ -1.76
SNRNP27-204ENST00000487029 RINT1Q6NUQ1 792 aa4.07□□□□□ -1.76
SNRNP27-204ENST00000487029 SLC44A2Q8IWA5 706 aaPredicted RBP4.07□□□□□ -1.76
SNRNP27-204ENST00000487029 WDR60Q8WVS4 1066 aa4.07□□□□□ -1.76
SNRNP27-204ENST00000487029 XAGE5Q8WWM1 108 aa4.07□□□□□ -1.76
SNRNP27-204ENST00000487029 RUBCNQ92622 972 aa4.07□□□□□ -1.76
SNRNP27-204ENST00000487029 FAM167BQ9BTA0 163 aa4.07□□□□□ -1.76
SNRNP27-204ENST00000487029 DPCDQ9BVM2 203 aaPredicted RBP4.07□□□□□ -1.76
SNRNP27-204ENST00000487029 VPS16Q9H269 839 aa4.07□□□□□ -1.76
SNRNP27-204ENST00000487029 PABPC3Q9H361 631 aaKnown RBP4.07□□□□□ -1.76
SNRNP27-204ENST00000487029 MLXIPQ9HAP2 919 aa4.07□□□□□ -1.76
SNRNP27-204ENST00000487029 SAYSD1Q9NPB0 183 aa4.07□□□□□ -1.76
SNRNP27-204ENST00000487029 FSCN3Q9NQT6 498 aa4.07□□□□□ -1.76
SNRNP27-204ENST00000487029 PRDM8Q9NQV8 689 aa4.07□□□□□ -1.76
SNRNP27-204ENST00000487029 ITM2CQ9NQX7 267 aa4.07□□□□□ -1.76
SNRNP27-204ENST00000487029 LPAR3Q9UBY5 353 aa4.07□□□□□ -1.76
SNRNP27-204ENST00000487029 GTF2A1LQ9UNN4 478 aa4.07□□□□□ -1.76
SNRNP27-204ENST00000487029 HMX3A6NHT5 357 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms