RNA–Protein interactions for RNA: ENST00000487010.1

COL3A1-206, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 2,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-206ENST00000487010 UBA1P22314 1058 aaKnown RBP12.6□□□□□ -0.39
COL3A1-206ENST00000487010 RPL10AP62906 217 aaKnown RBP12.6□□□□□ -0.39
COL3A1-206ENST00000487010 XIAPP98170 497 aa12.6□□□□□ -0.39
COL3A1-206ENST00000487010 BTKQ06187 659 aa12.6□□□□□ -0.39
COL3A1-206ENST00000487010 MSLNQ13421 630 aaPredicted RBP12.6□□□□□ -0.39
COL3A1-206ENST00000487010 MXD4Q14582 209 aaPredicted RBP12.6□□□□□ -0.39
COL3A1-206ENST00000487010 CCDC14Q49A88 953 aa12.6□□□□□ -0.39
COL3A1-206ENST00000487010 ATF7IP2Q5U623 682 aa12.6□□□□□ -0.39
COL3A1-206ENST00000487010 SCYL2Q6P3W7 929 aa12.6□□□□□ -0.39
COL3A1-206ENST00000487010 DENND5BQ6ZUT9 1274 aa12.6□□□□□ -0.39
COL3A1-206ENST00000487010 CYS1Q717R9 158 aa12.6□□□□□ -0.39
COL3A1-206ENST00000487010 NCAPG2Q86XI2 1143 aa12.6□□□□□ -0.39
COL3A1-206ENST00000487010 C1orf127Q8N9H9 656 aa12.6□□□□□ -0.39
COL3A1-206ENST00000487010 ACMSDQ8TDX5 336 aa12.6□□□□□ -0.39
COL3A1-206ENST00000487010 ACTRT2Q8TDY3 377 aa12.6□□□□□ -0.39
COL3A1-206ENST00000487010 SLC26A7Q8TE54 656 aa12.6□□□□□ -0.39
COL3A1-206ENST00000487010 USP6NLQ92738 828 aa12.6□□□□□ -0.39
COL3A1-206ENST00000487010 PIWIL1Q96J94 861 aaKnown RBP12.6□□□□□ -0.39
COL3A1-206ENST00000487010 HEXIM2Q96MH2 286 aaKnown RBP12.6□□□□□ -0.39
COL3A1-206ENST00000487010 OLFM3Q96PB7 478 aa12.6□□□□□ -0.39
COL3A1-206ENST00000487010 KLHL4Q9C0H6 718 aa12.6□□□□□ -0.39
COL3A1-206ENST00000487010 ADAMTS6Q9UKP5 1117 aa12.6□□□□□ -0.39
COL3A1-206ENST00000487010 GCATO75600 419 aa12.6□□□□□ -0.39
COL3A1-206ENST00000487010 GRAP2O75791 330 aa12.6□□□□□ -0.39
COL3A1-206ENST00000487010 IL18RAPO95256 599 aa12.6□□□□□ -0.39
COL3A1-206ENST00000487010 CXCL8P10145 99 aa12.6□□□□□ -0.39
COL3A1-206ENST00000487010 MED21Q13503 144 aa12.6□□□□□ -0.39
COL3A1-206ENST00000487010 TNFAIP1Q13829 316 aa12.6□□□□□ -0.39
COL3A1-206ENST00000487010 CA9Q16790 459 aa12.6□□□□□ -0.39
COL3A1-206ENST00000487010 LRRC36Q1X8D7 754 aa12.6□□□□□ -0.39
COL3A1-206ENST00000487010 SLC5A9Q2M3M2 681 aa12.6□□□□□ -0.39
COL3A1-206ENST00000487010 N4BP2L1Q5TBK1 243 aaPredicted RBP12.6□□□□□ -0.39
COL3A1-206ENST00000487010 LPCAT4Q643R3 524 aa12.6□□□□□ -0.39
COL3A1-206ENST00000487010 MAVSQ7Z434 540 aa12.6□□□□□ -0.39
COL3A1-206ENST00000487010 CDKL3Q8IVW4 592 aaPredicted RBP12.6□□□□□ -0.39
COL3A1-206ENST00000487010 ZNF280CQ8ND82 737 aa12.6□□□□□ -0.39
COL3A1-206ENST00000487010 DNERQ8NFT8 737 aa12.6□□□□□ -0.39
COL3A1-206ENST00000487010 JADE3Q92613 823 aa12.6□□□□□ -0.39
COL3A1-206ENST00000487010 GCOM2Q9BZD3 368 aaPredicted RBP12.6□□□□□ -0.39
COL3A1-206ENST00000487010 C2orf40Q9H1Z8 148 aa12.6□□□□□ -0.39
COL3A1-206ENST00000487010 RPF1Q9H9Y2 349 aaKnown RBP12.6□□□□□ -0.39
COL3A1-206ENST00000487010 VCX3AQ9NNX9 186 aa12.6□□□□□ -0.39
COL3A1-206ENST00000487010 DNAJC28Q9NX36 388 aa12.6□□□□□ -0.39
COL3A1-206ENST00000487010 DOCK1Q14185 1865 aa12.59□□□□□ -0.39
COL3A1-206ENST00000487010 A0A1B0GVG6 124 aa12.59□□□□□ -0.39
COL3A1-206ENST00000487010 ACKR2O00590 384 aa12.59□□□□□ -0.39
COL3A1-206ENST00000487010 PLIN3O60664 434 aa12.59□□□□□ -0.39
COL3A1-206ENST00000487010 GLRA3O75311 464 aa12.59□□□□□ -0.39
COL3A1-206ENST00000487010 SORBS2O94875 1100 aaKnown RBP12.59□□□□□ -0.39
COL3A1-206ENST00000487010 NFICP08651 508 aa12.59□□□□□ -0.39
COL3A1-206ENST00000487010 KCNA4P22459 653 aa12.59□□□□□ -0.39
COL3A1-206ENST00000487010 GRIA1P42261 906 aa12.59□□□□□ -0.39
COL3A1-206ENST00000487010 IDH3AP50213 366 aa12.59□□□□□ -0.39
COL3A1-206ENST00000487010 EPHB1P54762 984 aa12.59□□□□□ -0.39
COL3A1-206ENST00000487010 HMGCS2P54868 508 aa12.59□□□□□ -0.39
COL3A1-206ENST00000487010 GRM2Q14416 872 aa12.59□□□□□ -0.39
COL3A1-206ENST00000487010 EEF1DP3Q658K8 133 aa12.59□□□□□ -0.39
COL3A1-206ENST00000487010 STEAP4Q687X5 459 aa12.59□□□□□ -0.39
COL3A1-206ENST00000487010 DPH6Q7L8W6 267 aa12.59□□□□□ -0.39
COL3A1-206ENST00000487010 CDR2LQ86X02 465 aaPredicted RBP12.59□□□□□ -0.39
COL3A1-206ENST00000487010 EGFL6Q8IUX8 553 aa12.59□□□□□ -0.39
COL3A1-206ENST00000487010 TMEM192Q8IY95 271 aa12.59□□□□□ -0.39
COL3A1-206ENST00000487010 LRRC71Q8N4P6 559 aa12.59□□□□□ -0.39
COL3A1-206ENST00000487010 GDPD5Q8WTR4 605 aa12.59□□□□□ -0.39
COL3A1-206ENST00000487010 SNRNP25Q9BV90 132 aaKnown RBP12.59□□□□□ -0.39
COL3A1-206ENST00000487010 MAF1Q9H063 256 aa12.59□□□□□ -0.39
COL3A1-206ENST00000487010 FAM96AQ9H5X1 160 aa12.59□□□□□ -0.39
COL3A1-206ENST00000487010 CYP3A43Q9HB55 503 aa12.59□□□□□ -0.39
COL3A1-206ENST00000487010 AS3MTQ9HBK9 375 aa12.59□□□□□ -0.39
COL3A1-206ENST00000487010 CDH22Q9UJ99 828 aa12.59□□□□□ -0.39
COL3A1-206ENST00000487010 AFG3L2Q9Y4W6 797 aa12.59□□□□□ -0.39
COL3A1-206ENST00000487010 DPYSL4O14531 572 aa12.58□□□□□ -0.39
COL3A1-206ENST00000487010 B4GALT5O43286 388 aa12.58□□□□□ -0.39
COL3A1-206ENST00000487010 OPHN1O60890 802 aa12.58□□□□□ -0.39
COL3A1-206ENST00000487010 PDE5AO76074 875 aa12.58□□□□□ -0.39
COL3A1-206ENST00000487010 ALDH1A2O94788 518 aa12.58□□□□□ -0.39
COL3A1-206ENST00000487010 PROCP04070 461 aa12.58□□□□□ -0.39
COL3A1-206ENST00000487010 ALDOAP04075 364 aaKnown RBP12.58□□□□□ -0.39
COL3A1-206ENST00000487010 ITGB3P05106 788 aa12.58□□□□□ -0.39
COL3A1-206ENST00000487010 SERPINE1P05121 402 aa12.58□□□□□ -0.39
COL3A1-206ENST00000487010 PABPC4LP0CB38 370 aaKnown RBP12.58□□□□□ -0.39
COL3A1-206ENST00000487010 MYL4P12829 197 aa12.58□□□□□ -0.39
COL3A1-206ENST00000487010 VCLP18206 1134 aa12.58□□□□□ -0.39
COL3A1-206ENST00000487010 CYP3A5P20815 502 aa12.58□□□□□ -0.39
COL3A1-206ENST00000487010 TCF7P36402 384 aaPredicted RBP12.58□□□□□ -0.39
COL3A1-206ENST00000487010 AQP4P55087 323 aa12.58□□□□□ -0.39
COL3A1-206ENST00000487010 PDE1CQ14123 709 aaPredicted RBP12.58□□□□□ -0.39
COL3A1-206ENST00000487010 PCLAFQ15004 111 aa12.58□□□□□ -0.39
COL3A1-206ENST00000487010 PDCD2Q16342 344 aaPredicted RBP12.58□□□□□ -0.39
COL3A1-206ENST00000487010 MAP1SQ66K74 1059 aaPredicted RBP12.58□□□□□ -0.39
COL3A1-206ENST00000487010 UNC5BQ8IZJ1 945 aa12.58□□□□□ -0.39
COL3A1-206ENST00000487010 CCDC33Q8N5R6 958 aa12.58□□□□□ -0.39
COL3A1-206ENST00000487010 RNF217Q8TC41 542 aa12.58□□□□□ -0.39
COL3A1-206ENST00000487010 C12orf42Q96LP6 360 aa12.58□□□□□ -0.39
COL3A1-206ENST00000487010 HAPLN3Q96S86 360 aa12.58□□□□□ -0.39
COL3A1-206ENST00000487010 TBCBQ99426 244 aa12.58□□□□□ -0.39
COL3A1-206ENST00000487010 SORT1Q99523 831 aa12.58□□□□□ -0.39
COL3A1-206ENST00000487010 ZNF670Q9BS34 389 aa12.58□□□□□ -0.39
COL3A1-206ENST00000487010 MIS12Q9H081 205 aa12.58□□□□□ -0.39
COL3A1-206ENST00000487010 ZCWPW1Q9H0M4 648 aa12.58□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms