RNA–Protein interactions for RNA: ENST00000486867.1

SF1-216, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-216ENST00000486867 NAALADL1Q9UQQ1 740 aa13.73□□□□□ -0.21
SF1-216ENST00000486867 LRRC53A6NM62 1247 aa13.72□□□□□ -0.21
SF1-216ENST00000486867 STK25O00506 426 aa13.72□□□□□ -0.21
SF1-216ENST00000486867 IRAK2O43187 625 aa13.72□□□□□ -0.21
SF1-216ENST00000486867 MSI1O43347 362 aaKnown RBP13.72□□□□□ -0.21
SF1-216ENST00000486867 DAB1O75553 588 aa13.72□□□□□ -0.21
SF1-216ENST00000486867 PAPSS2O95340 614 aaPredicted RBP13.72□□□□□ -0.21
SF1-216ENST00000486867 COL9A1P20849 921 aa13.72□□□□□ -0.21
SF1-216ENST00000486867 CHKAP35790 457 aa13.72□□□□□ -0.21
SF1-216ENST00000486867 TCF15Q12870 199 aa13.72□□□□□ -0.21
SF1-216ENST00000486867 GAS6Q14393 721 aa13.72□□□□□ -0.21
SF1-216ENST00000486867 FBXO43Q4G163 708 aa13.72□□□□□ -0.21
SF1-216ENST00000486867 NUGGCQ68CJ6 796 aa13.72□□□□□ -0.21
SF1-216ENST00000486867 NAIF1Q69YI7 327 aaPredicted RBP13.72□□□□□ -0.21
SF1-216ENST00000486867 SARM1Q6SZW1 724 aa13.72□□□□□ -0.21
SF1-216ENST00000486867 BNIPLQ7Z465 357 aa13.72□□□□□ -0.21
SF1-216ENST00000486867 TAC4Q86UU9 113 aa13.72□□□□□ -0.21
SF1-216ENST00000486867 MSANTD4Q8NCY6 345 aa13.72□□□□□ -0.21
SF1-216ENST00000486867 TTC16Q8NEE8 873 aa13.72□□□□□ -0.21
SF1-216ENST00000486867 PRSS33Q8NF86 280 aa13.72□□□□□ -0.21
SF1-216ENST00000486867 PGAP3Q96FM1 320 aaPredicted RBP13.72□□□□□ -0.21
SF1-216ENST00000486867 P2RY11Q96G91 374 aa13.72□□□□□ -0.21
SF1-216ENST00000486867 AGPAT1Q99943 283 aa13.72□□□□□ -0.21
SF1-216ENST00000486867 XPO4Q9C0E2 1151 aaKnown RBP13.72□□□□□ -0.21
SF1-216ENST00000486867 NUCKS1Q9H1E3 243 aaKnown RBP13.72□□□□□ -0.21
SF1-216ENST00000486867 PDCL3Q9H2J4 239 aa13.72□□□□□ -0.21
SF1-216ENST00000486867 TMEM51Q9NW97 253 aa13.72□□□□□ -0.21
SF1-216ENST00000486867 RRN3Q9NYV6 651 aa13.72□□□□□ -0.21
SF1-216ENST00000486867 WDR35Q9P2L0 1181 aa13.72□□□□□ -0.21
SF1-216ENST00000486867 TMEM59LQ9UK28 342 aa13.72□□□□□ -0.21
SF1-216ENST00000486867 CAPN11Q9UMQ6 739 aa13.72□□□□□ -0.21
SF1-216ENST00000486867 NDRG2Q9UN36 371 aaKnown RBP13.72□□□□□ -0.21
SF1-216ENST00000486867 HCN4Q9Y3Q4 1203 aa13.72□□□□□ -0.21
SF1-216ENST00000486867 MUC22E2RYF6 1773 aaPredicted RBP13.72□□□□□ -0.21
SF1-216ENST00000486867 TCRBV5S1A1TA0A578 114 aa13.71□□□□□ -0.21
SF1-216ENST00000486867 TRUB2O95900 331 aaKnown RBP13.71□□□□□ -0.21
SF1-216ENST00000486867 NOS2P35228 1153 aa13.71□□□□□ -0.21
SF1-216ENST00000486867 MATKP42679 507 aa13.71□□□□□ -0.21
SF1-216ENST00000486867 HARS2P49590 506 aaKnown RBP13.71□□□□□ -0.21
SF1-216ENST00000486867 PITX1P78337 314 aaPredicted RBP13.71□□□□□ -0.21
SF1-216ENST00000486867 GRSF1Q12849 480 aaKnown RBP eCLIP13.71□□□□□ -0.21
SF1-216ENST00000486867 ARID5BQ14865 1188 aa13.71□□□□□ -0.21
SF1-216ENST00000486867 ADGRF1Q5T601 910 aa13.71□□□□□ -0.21
SF1-216ENST00000486867 OTUD1Q5VV17 481 aaPredicted RBP13.71□□□□□ -0.21
SF1-216ENST00000486867 FYB2Q5VWT5 728 aa13.71□□□□□ -0.21
SF1-216ENST00000486867 OR6B2Q6IFH4 312 aa13.71□□□□□ -0.21
SF1-216ENST00000486867 MON1BQ7L1V2 547 aa13.71□□□□□ -0.21
SF1-216ENST00000486867 C12orf40Q86WS4 652 aa13.71□□□□□ -0.21
SF1-216ENST00000486867 DENND1CQ8IV53 801 aa13.71□□□□□ -0.21
SF1-216ENST00000486867 UNC45BQ8IWX7 931 aa13.71□□□□□ -0.21
SF1-216ENST00000486867 MAML2Q8IZL2 1156 aaPredicted RBP13.71□□□□□ -0.21
SF1-216ENST00000486867 DEFB106AQ8N104 65 aa13.71□□□□□ -0.21
SF1-216ENST00000486867 CPA5Q8WXQ8 436 aa13.71□□□□□ -0.21
SF1-216ENST00000486867 NELL1Q92832 810 aa13.71□□□□□ -0.21
SF1-216ENST00000486867 NPY6RQ99463 290 aa13.71□□□□□ -0.21
SF1-216ENST00000486867 LMAN1LQ9HAT1 526 aa13.71□□□□□ -0.21
SF1-216ENST00000486867 PRMT8Q9NR22 394 aaPredicted RBP13.71□□□□□ -0.21
SF1-216ENST00000486867 NYNRINQ9P2P1 1898 aaKnown RBP13.7□□□□□ -0.22
SF1-216ENST00000486867 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.7□□□□□ -0.22
SF1-216ENST00000486867 CHURC1-FNTBB4DL54 471 aa13.7□□□□□ -0.22
SF1-216ENST00000486867 CBFA2T2O43439 604 aa13.7□□□□□ -0.22
SF1-216ENST00000486867 TULP3O75386 442 aa13.7□□□□□ -0.22
SF1-216ENST00000486867 GYPCP04921 128 aa13.7□□□□□ -0.22
SF1-216ENST00000486867 TPM3P06753 285 aa13.7□□□□□ -0.22
SF1-216ENST00000486867 HMBSP08397 361 aa13.7□□□□□ -0.22
SF1-216ENST00000486867 TDGF1P13385 188 aa13.7□□□□□ -0.22
SF1-216ENST00000486867 HNRNPH3P31942 346 aaKnown RBP13.7□□□□□ -0.22
SF1-216ENST00000486867 TBX4P57082 545 aa13.7□□□□□ -0.22
SF1-216ENST00000486867 ZBED6P86452 979 aa13.7□□□□□ -0.22
SF1-216ENST00000486867 CDK17Q00537 523 aa13.7□□□□□ -0.22
SF1-216ENST00000486867 ARID5AQ03989 594 aa13.7□□□□□ -0.22
SF1-216ENST00000486867 C1QBPQ07021 282 aaKnown RBP13.7□□□□□ -0.22
SF1-216ENST00000486867 MESP2Q0VG99 397 aa13.7□□□□□ -0.22
SF1-216ENST00000486867 DCAF6Q58WW2 860 aa13.7□□□□□ -0.22
SF1-216ENST00000486867 FAM133BQ5BKY9 247 aaKnown RBP13.7□□□□□ -0.22
SF1-216ENST00000486867 SFMBT2Q5VUG0 894 aa13.7□□□□□ -0.22
SF1-216ENST00000486867 HGSNATQ68CP4 663 aa13.7□□□□□ -0.22
SF1-216ENST00000486867 PPP1R2P3Q6NXS1 205 aa13.7□□□□□ -0.22
SF1-216ENST00000486867 C1orf210Q8IVY1 113 aa13.7□□□□□ -0.22
SF1-216ENST00000486867 SPEM1Q8N4L4 309 aa13.7□□□□□ -0.22
SF1-216ENST00000486867 VCPIP1Q96JH7 1222 aa13.7□□□□□ -0.22
SF1-216ENST00000486867 PNKPQ96T60 521 aa13.7□□□□□ -0.22
SF1-216ENST00000486867 ADAM33Q9BZ11 813 aa13.7□□□□□ -0.22
SF1-216ENST00000486867 SYNCQ9H7C4 482 aa13.7□□□□□ -0.22
SF1-216ENST00000486867 FBXO4Q9UKT5 387 aa13.7□□□□□ -0.22
SF1-216ENST00000486867 VPS13AQ96RL7 3174 aa13.69□□□□□ -0.22
SF1-216ENST00000486867 KCNU1A8MYU2 1149 aa13.69□□□□□ -0.22
SF1-216ENST00000486867 K7EQS6 105 aa13.69□□□□□ -0.22
SF1-216ENST00000486867 CAPN9O14815 690 aa13.69□□□□□ -0.22
SF1-216ENST00000486867 ACSL4O60488 711 aa13.69□□□□□ -0.22
SF1-216ENST00000486867 EGFP01133 1207 aa13.69□□□□□ -0.22
SF1-216ENST00000486867 CISD3P0C7P0 127 aa13.69□□□□□ -0.22
SF1-216ENST00000486867 GZMAP12544 262 aa13.69□□□□□ -0.22
SF1-216ENST00000486867 TYRP14679 529 aa13.69□□□□□ -0.22
SF1-216ENST00000486867 PTPN5P54829 565 aa13.69□□□□□ -0.22
SF1-216ENST00000486867 MTAPQ13126 283 aa13.69□□□□□ -0.22
SF1-216ENST00000486867 MTA1Q13330 715 aa13.69□□□□□ -0.22
SF1-216ENST00000486867 PPP2R5DQ14738 602 aa13.69□□□□□ -0.22
SF1-216ENST00000486867 ASIC2Q16515 512 aa13.69□□□□□ -0.22
SF1-216ENST00000486867 PREPLQ4J6C6 727 aaPredicted RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms