RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 A0A087WWV3 80 aa7.24□□□□□ -1.25
HDAC3-209ENST00000486618 E2F8A0AVK6 867 aa7.24□□□□□ -1.25
HDAC3-209ENST00000486618 ARHGEF35A5YM69 484 aa7.24□□□□□ -1.25
HDAC3-209ENST00000486618 C4orf47A7E2U8 309 aa7.24□□□□□ -1.25
HDAC3-209ENST00000486618 EXTL3O43909 919 aa7.24□□□□□ -1.25
HDAC3-209ENST00000486618 AKR1B10O60218 316 aa7.24□□□□□ -1.25
HDAC3-209ENST00000486618 NEMFO60524 1076 aa7.24□□□□□ -1.25
HDAC3-209ENST00000486618 CAVIN2O95810 425 aa7.24□□□□□ -1.25
HDAC3-209ENST00000486618 CEACAM1P13688 526 aa7.24□□□□□ -1.25
HDAC3-209ENST00000486618 KCNE1P15382 129 aa7.24□□□□□ -1.25
HDAC3-209ENST00000486618 CYP11B2P19099 503 aa7.24□□□□□ -1.25
HDAC3-209ENST00000486618 CSRP1P21291 193 aaKnown RBP7.24□□□□□ -1.25
HDAC3-209ENST00000486618 HPDP32754 393 aaPredicted RBP7.24□□□□□ -1.25
HDAC3-209ENST00000486618 KRT2P35908 639 aa7.24□□□□□ -1.25
HDAC3-209ENST00000486618 STT3AP46977 705 aa7.24□□□□□ -1.25
HDAC3-209ENST00000486618 PXNP49023 591 aaPredicted RBP7.24□□□□□ -1.25
HDAC3-209ENST00000486618 NEK2P51955 445 aa7.24□□□□□ -1.25
HDAC3-209ENST00000486618 NFKB2Q00653 900 aa7.24□□□□□ -1.25
HDAC3-209ENST00000486618 SOX4Q06945 474 aaPredicted RBP7.24□□□□□ -1.25
HDAC3-209ENST00000486618 ZNF252P-AS1Q0IIN9 211 aa7.24□□□□□ -1.25
HDAC3-209ENST00000486618 GRSF1Q12849 480 aaKnown RBP eCLIP7.24□□□□□ -1.25
HDAC3-209ENST00000486618 TOB2Q14106 344 aaPredicted RBP7.24□□□□□ -1.25
HDAC3-209ENST00000486618 LRP8Q14114 963 aa7.24□□□□□ -1.25
HDAC3-209ENST00000486618 KARSQ15046 597 aaKnown RBP7.24□□□□□ -1.25
HDAC3-209ENST00000486618 PLK5Q496M5 336 aa7.24□□□□□ -1.25
HDAC3-209ENST00000486618 NT5DC1Q5TFE4 455 aa7.24□□□□□ -1.25
HDAC3-209ENST00000486618 LRSAM1Q6UWE0 723 aa7.24□□□□□ -1.25
HDAC3-209ENST00000486618 CCBE1Q6UXH8 406 aaPredicted RBP7.24□□□□□ -1.25
HDAC3-209ENST00000486618 ALKAL1Q6UXT8 129 aa7.24□□□□□ -1.25
HDAC3-209ENST00000486618 ITIH5Q86UX2 942 aa7.24□□□□□ -1.25
HDAC3-209ENST00000486618 ARMC10Q8N2F6 343 aa7.24□□□□□ -1.25
HDAC3-209ENST00000486618 ERMNQ8TAM6 284 aa7.24□□□□□ -1.25
HDAC3-209ENST00000486618 GSDMBQ8TAX9 411 aa7.24□□□□□ -1.25
HDAC3-209ENST00000486618 BPIFB1Q8TDL5 484 aa7.24□□□□□ -1.25
HDAC3-209ENST00000486618 BSNDQ8WZ55 320 aa7.24□□□□□ -1.25
HDAC3-209ENST00000486618 KIFAP3Q92845 792 aa7.24□□□□□ -1.25
HDAC3-209ENST00000486618 RSPRY1Q96DX4 576 aa7.24□□□□□ -1.25
HDAC3-209ENST00000486618 SEC16BQ96JE7 1060 aa7.24□□□□□ -1.25
HDAC3-209ENST00000486618 ACAP3Q96P50 834 aa7.24□□□□□ -1.25
HDAC3-209ENST00000486618 DNAJC7Q99615 494 aa7.24□□□□□ -1.25
HDAC3-209ENST00000486618 SLX1AQ9BQ83 275 aa7.24□□□□□ -1.25
HDAC3-209ENST00000486618 TCHPQ9BT92 498 aa7.24□□□□□ -1.25
HDAC3-209ENST00000486618 CEP41Q9BYV8 373 aa7.24□□□□□ -1.25
HDAC3-209ENST00000486618 TRIM8Q9BZR9 551 aa7.24□□□□□ -1.25
HDAC3-209ENST00000486618 IQCGQ9H095 443 aaKnown RBP7.24□□□□□ -1.25
HDAC3-209ENST00000486618 CDH19Q9H159 772 aa7.24□□□□□ -1.25
HDAC3-209ENST00000486618 ATXN3LQ9H3M9 355 aa7.24□□□□□ -1.25
HDAC3-209ENST00000486618 PLEKHA5Q9HAU0 1116 aa7.24□□□□□ -1.25
HDAC3-209ENST00000486618 RASSF1Q9NS23 344 aa7.24□□□□□ -1.25
HDAC3-209ENST00000486618 C2orf42Q9NWW7 574 aa7.24□□□□□ -1.25
HDAC3-209ENST00000486618 ZMAT5Q9UDW3 170 aaKnown RBP7.24□□□□□ -1.25
HDAC3-209ENST00000486618 ZMYM5Q9UJ78 669 aa7.24□□□□□ -1.25
HDAC3-209ENST00000486618 YIPF1Q9Y548 306 aa7.24□□□□□ -1.25
HDAC3-209ENST00000486618 CYP46A1Q9Y6A2 500 aa7.24□□□□□ -1.25
HDAC3-209ENST00000486618 EML5Q05BV3 1969 aa7.24□□□□□ -1.25
HDAC3-209ENST00000486618 NCANO14594 1321 aa7.24□□□□□ -1.25
HDAC3-209ENST00000486618 PHLPP2Q6ZVD8 1323 aa7.24□□□□□ -1.25
HDAC3-209ENST00000486618 STK36Q9NRP7 1315 aa7.24□□□□□ -1.25
HDAC3-209ENST00000486618 PI4KAP42356 2102 aa7.24□□□□□ -1.25
HDAC3-209ENST00000486618 NUP210Q8TEM1 1887 aaPredicted RBP7.24□□□□□ -1.25
HDAC3-209ENST00000486618 THADAQ6YHU6 1953 aa7.23□□□□□ -1.25
HDAC3-209ENST00000486618 BCLAF3A2AJT9 711 aaKnown RBP7.23□□□□□ -1.25
HDAC3-209ENST00000486618 OR6C75A6NL08 312 aa7.23□□□□□ -1.25
HDAC3-209ENST00000486618 SRRM3A6NNA2 597 aaPredicted RBP7.23□□□□□ -1.25
HDAC3-209ENST00000486618 TMCO5BA8MYB1 307 aa7.23□□□□□ -1.25
HDAC3-209ENST00000486618 KLF4O43474 513 aa7.23□□□□□ -1.25
HDAC3-209ENST00000486618 REC8O95072 547 aa7.23□□□□□ -1.25
HDAC3-209ENST00000486618 OAZ2O95190 189 aa7.23□□□□□ -1.25
HDAC3-209ENST00000486618 AGR2O95994 175 aa7.23□□□□□ -1.25
HDAC3-209ENST00000486618 FSTP19883 344 aa7.23□□□□□ -1.25
HDAC3-209ENST00000486618 ENPP1P22413 925 aa7.23□□□□□ -1.25
HDAC3-209ENST00000486618 RXRGP48443 463 aa7.23□□□□□ -1.25
HDAC3-209ENST00000486618 MCM2P49736 904 aa7.23□□□□□ -1.25
HDAC3-209ENST00000486618 NLRP12P59046 1061 aa7.23□□□□□ -1.25
HDAC3-209ENST00000486618 OSTNP61366 133 aa7.23□□□□□ -1.25
HDAC3-209ENST00000486618 CREB5Q02930 508 aa7.23□□□□□ -1.25
HDAC3-209ENST00000486618 YWHAHQ04917 246 aaPredicted RBP7.23□□□□□ -1.25
HDAC3-209ENST00000486618 IFRD2Q12894 506 aaPredicted RBP7.23□□□□□ -1.25
HDAC3-209ENST00000486618 PRKG2Q13237 762 aa7.23□□□□□ -1.25
HDAC3-209ENST00000486618 KRT72Q14CN4 511 aa7.23□□□□□ -1.25
HDAC3-209ENST00000486618 TCEA2Q15560 299 aa7.23□□□□□ -1.25
HDAC3-209ENST00000486618 ZNF568Q3ZCX4 644 aa7.23□□□□□ -1.25
HDAC3-209ENST00000486618 TMEM196Q5HYL7 178 aa7.23□□□□□ -1.25
HDAC3-209ENST00000486618 CT47A1Q5JQC4 288 aaPredicted RBP7.23□□□□□ -1.25
HDAC3-209ENST00000486618 GPR158Q5T848 1215 aa7.23□□□□□ -1.25
HDAC3-209ENST00000486618 HGSNATQ68CP4 663 aa7.23□□□□□ -1.25
HDAC3-209ENST00000486618 IRGCQ6NXR0 463 aa7.23□□□□□ -1.25
HDAC3-209ENST00000486618 TOGARAM2Q6ZUX3 1019 aa7.23□□□□□ -1.25
HDAC3-209ENST00000486618 BTN2A1Q7KYR7 527 aa7.23□□□□□ -1.25
HDAC3-209ENST00000486618 HS2ST1Q7LGA3 356 aa7.23□□□□□ -1.25
HDAC3-209ENST00000486618 VN1R5Q7Z5H4 357 aa7.23□□□□□ -1.25
HDAC3-209ENST00000486618 USP37Q86T82 979 aa7.23□□□□□ -1.25
HDAC3-209ENST00000486618 CATSPER3Q86XQ3 398 aa7.23□□□□□ -1.25
HDAC3-209ENST00000486618 BEST2Q8NFU1 509 aa7.23□□□□□ -1.25
HDAC3-209ENST00000486618 OR8H1Q8NGG4 311 aa7.23□□□□□ -1.25
HDAC3-209ENST00000486618 ZFYVE19Q96K21 471 aa7.23□□□□□ -1.25
HDAC3-209ENST00000486618 TBC1D32Q96NH3 1257 aa7.23□□□□□ -1.25
HDAC3-209ENST00000486618 GCNAQ96QF7 691 aa7.23□□□□□ -1.25
HDAC3-209ENST00000486618 CENPOQ9BU64 300 aa7.23□□□□□ -1.25
HDAC3-209ENST00000486618 LRRC3Q9BY71 257 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms