RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 ZMYM5Q9UJ78 669 aa9.89□□□□□ -0.83
TMEM39A-208ENST00000486159 HCN2Q9UL51 889 aa9.89□□□□□ -0.83
TMEM39A-208ENST00000486159 SPTBN2O15020 2390 aa9.89□□□□□ -0.83
TMEM39A-208ENST00000486159 NAV2Q8IVL1 2488 aa9.89□□□□□ -0.83
TMEM39A-208ENST00000486159 CTAGE9A4FU28 777 aa9.88□□□□□ -0.83
TMEM39A-208ENST00000486159 SOBPA7XYQ1 873 aa9.88□□□□□ -0.83
TMEM39A-208ENST00000486159 TNFRSF10BO14763 440 aa9.88□□□□□ -0.83
TMEM39A-208ENST00000486159 PJA2O43164 708 aa9.88□□□□□ -0.83
TMEM39A-208ENST00000486159 COCHO43405 550 aa9.88□□□□□ -0.83
TMEM39A-208ENST00000486159 LRP3O75074 770 aa9.88□□□□□ -0.83
TMEM39A-208ENST00000486159 ATG13O75143 517 aa9.88□□□□□ -0.83
TMEM39A-208ENST00000486159 PHACTR2O75167 634 aa9.88□□□□□ -0.83
TMEM39A-208ENST00000486159 ADRB1P08588 477 aa9.88□□□□□ -0.83
TMEM39A-208ENST00000486159 ZNF806P0C7X5 589 aa9.88□□□□□ -0.83
TMEM39A-208ENST00000486159 MBL2P11226 248 aaPredicted RBP9.88□□□□□ -0.83
TMEM39A-208ENST00000486159 CCDC130P13994 396 aa9.88□□□□□ -0.83
TMEM39A-208ENST00000486159 TCF3P15923 654 aa9.88□□□□□ -0.83
TMEM39A-208ENST00000486159 FERP16591 822 aa9.88□□□□□ -0.83
TMEM39A-208ENST00000486159 EIF4A3P38919 411 aaKnown RBP9.88□□□□□ -0.83
TMEM39A-208ENST00000486159 MPLP40238 635 aa9.88□□□□□ -0.83
TMEM39A-208ENST00000486159 STAT1P42224 750 aa9.88□□□□□ -0.83
TMEM39A-208ENST00000486159 ARHGAP25P42331 645 aa9.88□□□□□ -0.83
TMEM39A-208ENST00000486159 DGKEP52429 567 aa9.88□□□□□ -0.83
TMEM39A-208ENST00000486159 KIF11P52732 1056 aa9.88□□□□□ -0.83
TMEM39A-208ENST00000486159 TNNC1P63316 161 aa9.88□□□□□ -0.83
TMEM39A-208ENST00000486159 NOP14P78316 857 aaKnown RBP9.88□□□□□ -0.83
TMEM39A-208ENST00000486159 SLC7A9P82251 487 aa9.88□□□□□ -0.83
TMEM39A-208ENST00000486159 KDSRQ06136 332 aa9.88□□□□□ -0.83
TMEM39A-208ENST00000486159 KLHL30Q0D2K2 578 aa9.88□□□□□ -0.83
TMEM39A-208ENST00000486159 TRPC3Q13507 836 aa9.88□□□□□ -0.83
TMEM39A-208ENST00000486159 ASTE1Q2TB18 679 aaPredicted RBP9.88□□□□□ -0.83
TMEM39A-208ENST00000486159 PLA2G2CQ5R387 149 aa9.88□□□□□ -0.83
TMEM39A-208ENST00000486159 N4BP2L1Q5TBK1 243 aaPredicted RBP9.88□□□□□ -0.83
TMEM39A-208ENST00000486159 HGSNATQ68CP4 663 aa9.88□□□□□ -0.83
TMEM39A-208ENST00000486159 DPY19L2P1Q6NXN4 242 aa9.88□□□□□ -0.83
TMEM39A-208ENST00000486159 SYT13Q7L8C5 426 aa9.88□□□□□ -0.83
TMEM39A-208ENST00000486159 GPRIN1Q7Z2K8 1008 aa9.88□□□□□ -0.83
TMEM39A-208ENST00000486159 MTERF4Q7Z6M4 381 aaKnown RBP9.88□□□□□ -0.83
TMEM39A-208ENST00000486159 ACOT1Q86TX2 421 aa9.88□□□□□ -0.83
TMEM39A-208ENST00000486159 TTC30AQ86WT1 665 aa9.88□□□□□ -0.83
TMEM39A-208ENST00000486159 NUP93Q8N1F7 819 aa9.88□□□□□ -0.83
TMEM39A-208ENST00000486159 RNF10Q8N5U6 811 aaKnown RBP9.88□□□□□ -0.83
TMEM39A-208ENST00000486159 C12orf29Q8N999 325 aa9.88□□□□□ -0.83
TMEM39A-208ENST00000486159 ACRBPQ8NEB7 543 aa9.88□□□□□ -0.83
TMEM39A-208ENST00000486159 PARD3BQ8TEW8 1205 aa9.88□□□□□ -0.83
TMEM39A-208ENST00000486159 JAKMIP2Q96AA8 810 aa9.88□□□□□ -0.83
TMEM39A-208ENST00000486159 P2RY11Q96G91 374 aa9.88□□□□□ -0.83
TMEM39A-208ENST00000486159 TWNKQ96RR1 684 aa9.88□□□□□ -0.83
TMEM39A-208ENST00000486159 SMOQ99835 787 aa9.88□□□□□ -0.83
TMEM39A-208ENST00000486159 CRACR2AQ9BSW2 395 aa9.88□□□□□ -0.83
TMEM39A-208ENST00000486159 STK33Q9BYT3 514 aa9.88□□□□□ -0.83
TMEM39A-208ENST00000486159 LZTFL1Q9NQ48 299 aa9.88□□□□□ -0.83
TMEM39A-208ENST00000486159 GMIPQ9P107 970 aa9.88□□□□□ -0.83
TMEM39A-208ENST00000486159 ARHGAP20Q9P2F6 1191 aa9.88□□□□□ -0.83
TMEM39A-208ENST00000486159 SPAG17Q6Q759 2223 aa9.87□□□□□ -0.83
TMEM39A-208ENST00000486159 THADAQ6YHU6 1953 aa9.87□□□□□ -0.83
TMEM39A-208ENST00000486159 SGK1O00141 431 aa9.87□□□□□ -0.83
TMEM39A-208ENST00000486159 GIPC1O14908 333 aa9.87□□□□□ -0.83
TMEM39A-208ENST00000486159 TRIM66O15016 1216 aa9.87□□□□□ -0.83
TMEM39A-208ENST00000486159 ADAM23O75077 832 aa9.87□□□□□ -0.83
TMEM39A-208ENST00000486159 TBX18O95935 607 aa9.87□□□□□ -0.83
TMEM39A-208ENST00000486159 IRF1P10914 325 aa9.87□□□□□ -0.83
TMEM39A-208ENST00000486159 SLC9A1P19634 815 aa9.87□□□□□ -0.83
TMEM39A-208ENST00000486159 YWHAQP27348 245 aa9.87□□□□□ -0.83
TMEM39A-208ENST00000486159 JAM2P57087 298 aa9.87□□□□□ -0.83
TMEM39A-208ENST00000486159 CREB5Q02930 508 aa9.87□□□□□ -0.83
TMEM39A-208ENST00000486159 BIRC3Q13489 604 aa9.87□□□□□ -0.83
TMEM39A-208ENST00000486159 NCOA4Q13772 614 aa9.87□□□□□ -0.83
TMEM39A-208ENST00000486159 RAPGEF1Q13905 1077 aa9.87□□□□□ -0.83
TMEM39A-208ENST00000486159 SLC18A3Q16572 532 aa9.87□□□□□ -0.83
TMEM39A-208ENST00000486159 TDRD12Q587J7 1177 aaKnown RBP9.87□□□□□ -0.83
TMEM39A-208ENST00000486159 ZNF569Q5MCW4 686 aa9.87□□□□□ -0.83
TMEM39A-208ENST00000486159 CCDC122Q5T0U0 273 aa9.87□□□□□ -0.83
TMEM39A-208ENST00000486159 STPG1Q5TH74 334 aa9.87□□□□□ -0.83
TMEM39A-208ENST00000486159 ANO7Q6IWH7 933 aa9.87□□□□□ -0.83
TMEM39A-208ENST00000486159 FAM35AQ86V20 835 aa9.87□□□□□ -0.83
TMEM39A-208ENST00000486159 FUKQ8N0W3 1084 aa9.87□□□□□ -0.83
TMEM39A-208ENST00000486159 PHTF2Q8N3S3 785 aa9.87□□□□□ -0.83
TMEM39A-208ENST00000486159 CAMKK1Q8N5S9 505 aa9.87□□□□□ -0.83
TMEM39A-208ENST00000486159 ALLCQ8N6M5 410 aa9.87□□□□□ -0.83
TMEM39A-208ENST00000486159 TXNDC5Q8NBS9 432 aaKnown RBP9.87□□□□□ -0.83
TMEM39A-208ENST00000486159 MDGA1Q8NFP4 955 aa9.87□□□□□ -0.83
TMEM39A-208ENST00000486159 UBE2Q2Q8WVN8 375 aa9.87□□□□□ -0.83
TMEM39A-208ENST00000486159 FBXO32Q969P5 355 aa9.87□□□□□ -0.83
TMEM39A-208ENST00000486159 ZC3H10Q96K80 434 aaKnown RBP9.87□□□□□ -0.83
TMEM39A-208ENST00000486159 NAPGQ99747 312 aaPredicted RBP9.87□□□□□ -0.83
TMEM39A-208ENST00000486159 MED10Q9BTT4 135 aa9.87□□□□□ -0.83
TMEM39A-208ENST00000486159 INTS2Q9H0H0 1204 aaKnown RBP9.87□□□□□ -0.83
TMEM39A-208ENST00000486159 SIX2Q9NPC8 291 aa9.87□□□□□ -0.83
TMEM39A-208ENST00000486159 NLRC4Q9NPP4 1024 aa9.87□□□□□ -0.83
TMEM39A-208ENST00000486159 OSER1Q9NX31 292 aa9.87□□□□□ -0.83
TMEM39A-208ENST00000486159 APEX2Q9UBZ4 518 aa9.87□□□□□ -0.83
TMEM39A-208ENST00000486159 NUDT5Q9UKK9 219 aa9.87□□□□□ -0.83
TMEM39A-208ENST00000486159 INTUQ9ULD6 942 aa9.87□□□□□ -0.83
TMEM39A-208ENST00000486159 COQ4Q9Y3A0 265 aa9.87□□□□□ -0.83
TMEM39A-208ENST00000486159 REXO2Q9Y3B8 237 aaKnown RBP9.87□□□□□ -0.83
TMEM39A-208ENST00000486159 PCDHA13Q9Y5I0 950 aa9.87□□□□□ -0.83
TMEM39A-208ENST00000486159 CCDC163A0A0D9SF12 145 aa9.86□□□□□ -0.83
TMEM39A-208ENST00000486159 BTNL10A8MVZ5 291 aa9.86□□□□□ -0.83
TMEM39A-208ENST00000486159 MDM4O15151 490 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms