RNA–Protein interactions for RNA: ENST00000486080.5

COL9A1-207, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,844 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-207ENST00000486080 PSEN1P49768 467 aa14.97□□□□□ -0.01
COL9A1-207ENST00000486080 EPHB3P54753 998 aa14.97□□□□□ -0.01
COL9A1-207ENST00000486080 ERVK-21P61565 698 aa14.97□□□□□ -0.01
COL9A1-207ENST00000486080 PLD1Q13393 1074 aa14.97□□□□□ -0.01
COL9A1-207ENST00000486080 EFHC2Q5JST6 749 aa14.97□□□□□ -0.01
COL9A1-207ENST00000486080 C10orf120Q5SQS8 335 aa14.97□□□□□ -0.01
COL9A1-207ENST00000486080 FAM72AQ5TYM5 149 aa14.97□□□□□ -0.01
COL9A1-207ENST00000486080 FAM72DQ6L9T8 149 aa14.97□□□□□ -0.01
COL9A1-207ENST00000486080 CCDC137Q6PK04 289 aaKnown RBP14.97□□□□□ -0.01
COL9A1-207ENST00000486080 BBS12Q6ZW61 710 aa14.97□□□□□ -0.01
COL9A1-207ENST00000486080 DNAJB7Q7Z6W7 309 aaPredicted RBP14.97□□□□□ -0.01
COL9A1-207ENST00000486080 FAM72BQ86X60 149 aa14.97□□□□□ -0.01
COL9A1-207ENST00000486080 PSTKQ8IV42 348 aaKnown RBP14.97□□□□□ -0.01
COL9A1-207ENST00000486080 PQLC3Q8N755 202 aa14.97□□□□□ -0.01
COL9A1-207ENST00000486080 PCDH19Q8TAB3 1148 aa14.97□□□□□ -0.01
COL9A1-207ENST00000486080 NTAN1Q96AB6 310 aa14.97□□□□□ -0.01
COL9A1-207ENST00000486080 MYRFLQ96LU7 910 aa14.97□□□□□ -0.01
COL9A1-207ENST00000486080 ZNF512Q96ME7 567 aaPredicted RBP14.97□□□□□ -0.01
COL9A1-207ENST00000486080 RNF157Q96PX1 679 aa14.97□□□□□ -0.01
COL9A1-207ENST00000486080 MAK16Q9BXY0 300 aaKnown RBP14.97□□□□□ -0.01
COL9A1-207ENST00000486080 PBX4Q9BYU1 374 aa14.97□□□□□ -0.01
COL9A1-207ENST00000486080 TKTL2Q9H0I9 626 aa14.97□□□□□ -0.01
COL9A1-207ENST00000486080 SLITRK6Q9H5Y7 841 aa14.97□□□□□ -0.01
COL9A1-207ENST00000486080 LRRC19Q9H756 370 aa14.97□□□□□ -0.01
COL9A1-207ENST00000486080 CWC15Q9P013 229 aaKnown RBP14.97□□□□□ -0.01
COL9A1-207ENST00000486080 ATG2AQ2TAZ0 1938 aa14.97□□□□□ -0.01
COL9A1-207ENST00000486080 ZSCAN5CA6NGD5 496 aaPredicted RBP14.96□□□□□ -0.01
COL9A1-207ENST00000486080 OBSL1O75147 1896 aa14.96□□□□□ -0.01
COL9A1-207ENST00000486080 GOT1P17174 413 aa14.96□□□□□ -0.01
COL9A1-207ENST00000486080 SCAPQ12770 1279 aa14.96□□□□□ -0.01
COL9A1-207ENST00000486080 VEPH1Q14D04 833 aa14.96□□□□□ -0.01
COL9A1-207ENST00000486080 TAF12Q16514 161 aa14.96□□□□□ -0.01
COL9A1-207ENST00000486080 GLE1Q53GS7 698 aaKnown RBP14.96□□□□□ -0.01
COL9A1-207ENST00000486080 KREMEN2Q8NCW0 462 aa14.96□□□□□ -0.01
COL9A1-207ENST00000486080 DOCK6Q96HP0 2047 aa14.96□□□□□ -0.01
COL9A1-207ENST00000486080 ZNF670Q9BS34 389 aa14.96□□□□□ -0.01
COL9A1-207ENST00000486080 NKX2-4Q9H2Z4 354 aa14.96□□□□□ -0.01
COL9A1-207ENST00000486080 ZNF840PA6NDX5 716 aa14.96□□□□□ -0.01
COL9A1-207ENST00000486080 TLR5O60602 858 aa14.96□□□□□ -0.01
COL9A1-207ENST00000486080 HEXIM1O94992 359 aaKnown RBP14.96□□□□□ -0.01
COL9A1-207ENST00000486080 PTGIRP43119 386 aa14.96□□□□□ -0.01
COL9A1-207ENST00000486080 DR1Q01658 176 aa14.96□□□□□ -0.01
COL9A1-207ENST00000486080 GPM6BQ13491 265 aa14.96□□□□□ -0.01
COL9A1-207ENST00000486080 CCNG2Q16589 344 aa14.96□□□□□ -0.01
COL9A1-207ENST00000486080 ARL13BQ3SXY8 428 aa14.96□□□□□ -0.01
COL9A1-207ENST00000486080 CCDC70Q6NSX1 233 aa14.96□□□□□ -0.01
COL9A1-207ENST00000486080 NPNTQ6UXI9 565 aa14.96□□□□□ -0.01
COL9A1-207ENST00000486080 MIB1Q86YT6 1006 aa14.96□□□□□ -0.01
COL9A1-207ENST00000486080 CCDC26Q8TAB7 109 aa14.96□□□□□ -0.01
COL9A1-207ENST00000486080 PSMG2Q969U7 264 aa14.96□□□□□ -0.01
COL9A1-207ENST00000486080 FAF2Q96CS3 445 aa14.96□□□□□ -0.01
COL9A1-207ENST00000486080 TRMT2BQ96GJ1 504 aaKnown RBP14.96□□□□□ -0.01
COL9A1-207ENST00000486080 SERPINB11Q96P15 392 aa14.96□□□□□ -0.01
COL9A1-207ENST00000486080 CSPG4P5Q96PW8 444 aa14.96□□□□□ -0.01
COL9A1-207ENST00000486080 TRIM51Q9BSJ1 452 aa14.96□□□□□ -0.01
COL9A1-207ENST00000486080 ZNF334Q9HCZ1 680 aaPredicted RBP14.96□□□□□ -0.01
COL9A1-207ENST00000486080 STIM2Q9P246 746 aa14.96□□□□□ -0.01
COL9A1-207ENST00000486080 PCYOX1Q9UHG3 505 aa14.96□□□□□ -0.01
COL9A1-207ENST00000486080 TRANK1O15050 2925 aa14.96□□□□□ -0.02
COL9A1-207ENST00000486080 TARSL2A2RTX5 802 aaKnown RBP14.95□□□□□ -0.02
COL9A1-207ENST00000486080 H3BNC9 293 aa14.95□□□□□ -0.02
COL9A1-207ENST00000486080 CREB3O43889 395 aa14.95□□□□□ -0.02
COL9A1-207ENST00000486080 GLUD1P00367 558 aa14.95□□□□□ -0.02
COL9A1-207ENST00000486080 C8AP07357 584 aa14.95□□□□□ -0.02
COL9A1-207ENST00000486080 PECAM1P16284 738 aaPredicted RBP14.95□□□□□ -0.02
COL9A1-207ENST00000486080 AMPD1P23109 780 aa14.95□□□□□ -0.02
COL9A1-207ENST00000486080 GGCXP38435 758 aa14.95□□□□□ -0.02
COL9A1-207ENST00000486080 CLCN4P51793 760 aa14.95□□□□□ -0.02
COL9A1-207ENST00000486080 AIF1P55008 147 aa14.95□□□□□ -0.02
COL9A1-207ENST00000486080 VSNL1P62760 191 aa14.95□□□□□ -0.02
COL9A1-207ENST00000486080 OTUD4Q01804 1114 aaKnown RBP14.95□□□□□ -0.02
COL9A1-207ENST00000486080 TRADDQ15628 312 aa14.95□□□□□ -0.02
COL9A1-207ENST00000486080 VSIG1Q86XK7 387 aa14.95□□□□□ -0.02
COL9A1-207ENST00000486080 CCDC105Q8IYK2 499 aa14.95□□□□□ -0.02
COL9A1-207ENST00000486080 PLD5Q8N7P1 536 aa14.95□□□□□ -0.02
COL9A1-207ENST00000486080 ACTL9Q8TC94 416 aa14.95□□□□□ -0.02
COL9A1-207ENST00000486080 OVCA2Q8WZ82 227 aa14.95□□□□□ -0.02
COL9A1-207ENST00000486080 ETNK2Q9NVF9 386 aa14.95□□□□□ -0.02
COL9A1-207ENST00000486080 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.95□□□□□ -0.02
COL9A1-207ENST00000486080 ARHGEF38Q9NXL2 777 aa14.95□□□□□ -0.02
COL9A1-207ENST00000486080 MARCH2Q9P0N8 246 aa14.95□□□□□ -0.02
COL9A1-207ENST00000486080 RASAL2Q9UJF2 1139 aa14.95□□□□□ -0.02
COL9A1-207ENST00000486080 DNPEPQ9ULA0 475 aa14.95□□□□□ -0.02
COL9A1-207ENST00000486080 TLR6Q9Y2C9 796 aa14.95□□□□□ -0.02
COL9A1-207ENST00000486080 MFHAS1Q9Y4C4 1052 aa14.95□□□□□ -0.02
COL9A1-207ENST00000486080 DENND4CQ5VZ89 1909 aa14.95□□□□□ -0.02
COL9A1-207ENST00000486080 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.94□□□□□ -0.02
COL9A1-207ENST00000486080 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.94□□□□□ -0.02
COL9A1-207ENST00000486080 ESYT3A0FGR9 886 aa14.94□□□□□ -0.02
COL9A1-207ENST00000486080 LIASO43766 372 aa14.94□□□□□ -0.02
COL9A1-207ENST00000486080 CCR1P32246 355 aa14.94□□□□□ -0.02
COL9A1-207ENST00000486080 FNTAP49354 379 aa14.94□□□□□ -0.02
COL9A1-207ENST00000486080 TBX4P57082 545 aa14.94□□□□□ -0.02
COL9A1-207ENST00000486080 GUCY2DQ02846 1103 aa14.94□□□□□ -0.02
COL9A1-207ENST00000486080 SEMA3BQ13214 749 aa14.94□□□□□ -0.02
COL9A1-207ENST00000486080 TFDP2Q14188 446 aa14.94□□□□□ -0.02
COL9A1-207ENST00000486080 PPP2R5DQ14738 602 aa14.94□□□□□ -0.02
COL9A1-207ENST00000486080 SNX30Q5VWJ9 437 aa14.94□□□□□ -0.02
COL9A1-207ENST00000486080 SLC9A4Q6AI14 798 aa14.94□□□□□ -0.02
COL9A1-207ENST00000486080 C1orf228Q6PIY5 440 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms