RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 TMA16Q96EY4 203 aaKnown RBP13.04□□□□□ -0.32
PTCD1-205ENST00000485746 HHIPQ96QV1 700 aa13.04□□□□□ -0.32
PTCD1-205ENST00000485746 CPXM1Q96SM3 734 aa13.04□□□□□ -0.32
PTCD1-205ENST00000485746 C2orf42Q9NWW7 574 aa13.04□□□□□ -0.32
PTCD1-205ENST00000485746 MARK1Q9P0L2 795 aa13.04□□□□□ -0.32
PTCD1-205ENST00000485746 SLC12A6Q9UHW9 1150 aa13.04□□□□□ -0.32
PTCD1-205ENST00000485746 MIA3Q5JRA6 1907 aa13.03□□□□□ -0.32
PTCD1-205ENST00000485746 SYNJ2BP-COX16A0A087WUM0 186 aa13.03□□□□□ -0.32
PTCD1-205ENST00000485746 TYW5A2RUC4 315 aaKnown RBP13.03□□□□□ -0.32
PTCD1-205ENST00000485746 PRR23AA6NEV1 266 aa13.03□□□□□ -0.32
PTCD1-205ENST00000485746 GOLGA6L19H0YKK7 550 aa13.03□□□□□ -0.32
PTCD1-205ENST00000485746 K7ESF4 209 aa13.03□□□□□ -0.32
PTCD1-205ENST00000485746 ZBTB24O43167 697 aaPredicted RBP13.03□□□□□ -0.32
PTCD1-205ENST00000485746 CACNG3O60359 315 aa13.03□□□□□ -0.32
PTCD1-205ENST00000485746 GRAP2O75791 330 aa13.03□□□□□ -0.32
PTCD1-205ENST00000485746 ALDH1A2O94788 518 aa13.03□□□□□ -0.32
PTCD1-205ENST00000485746 PAPSS2O95340 614 aaPredicted RBP13.03□□□□□ -0.32
PTCD1-205ENST00000485746 LATS1O95835 1130 aa13.03□□□□□ -0.32
PTCD1-205ENST00000485746 MOCS2O96007 188 aaPredicted RBP13.03□□□□□ -0.32
PTCD1-205ENST00000485746 APOEP02649 317 aa13.03□□□□□ -0.32
PTCD1-205ENST00000485746 ERBB2P04626 1255 aa13.03□□□□□ -0.32
PTCD1-205ENST00000485746 GLI1P08151 1106 aa13.03□□□□□ -0.32
PTCD1-205ENST00000485746 MMEP08473 750 aa13.03□□□□□ -0.32
PTCD1-205ENST00000485746 PXNP49023 591 aaPredicted RBP13.03□□□□□ -0.32
PTCD1-205ENST00000485746 RNASE9P60153 205 aaKnown RBP13.03□□□□□ -0.32
PTCD1-205ENST00000485746 ARID5AQ03989 594 aa13.03□□□□□ -0.32
PTCD1-205ENST00000485746 EOGTQ5NDL2 527 aa13.03□□□□□ -0.32
PTCD1-205ENST00000485746 SYPL2Q5VXT5 272 aa13.03□□□□□ -0.32
PTCD1-205ENST00000485746 FAM183BPQ6ZVS7 135 aa13.03□□□□□ -0.32
PTCD1-205ENST00000485746 SYT13Q7L8C5 426 aa13.03□□□□□ -0.32
PTCD1-205ENST00000485746 ASCL5Q7RTU5 278 aa13.03□□□□□ -0.32
PTCD1-205ENST00000485746 NOP9Q86U38 636 aaKnown RBP13.03□□□□□ -0.32
PTCD1-205ENST00000485746 CCDC117Q8IWD4 279 aaPredicted RBP13.03□□□□□ -0.32
PTCD1-205ENST00000485746 SFTPA1Q8IWL2 248 aa13.03□□□□□ -0.32
PTCD1-205ENST00000485746 ETFBKMTQ8IXQ9 262 aa13.03□□□□□ -0.32
PTCD1-205ENST00000485746 CPXM2Q8N436 756 aa13.03□□□□□ -0.32
PTCD1-205ENST00000485746 CAMKK1Q8N5S9 505 aa13.03□□□□□ -0.32
PTCD1-205ENST00000485746 ALLCQ8N6M5 410 aa13.03□□□□□ -0.32
PTCD1-205ENST00000485746 TERB1Q8NA31 727 aa13.03□□□□□ -0.32
PTCD1-205ENST00000485746 TXNDC5Q8NBS9 432 aaKnown RBP13.03□□□□□ -0.32
PTCD1-205ENST00000485746 ZBTB44Q8NCP5 570 aa13.03□□□□□ -0.32
PTCD1-205ENST00000485746 TSTD1Q8NFU3 115 aa13.03□□□□□ -0.32
PTCD1-205ENST00000485746 ERGIC2Q96RQ1 377 aa13.03□□□□□ -0.32
PTCD1-205ENST00000485746 FAM204AQ9H8W3 233 aa13.03□□□□□ -0.32
PTCD1-205ENST00000485746 SEPT11Q9NVA2 429 aaKnown RBP13.03□□□□□ -0.32
PTCD1-205ENST00000485746 POLR3BQ9NW08 1133 aaPredicted RBP13.03□□□□□ -0.32
PTCD1-205ENST00000485746 COX16Q9P0S2 106 aa13.03□□□□□ -0.32
PTCD1-205ENST00000485746 TJP2Q9UDY2 1190 aa13.03□□□□□ -0.32
PTCD1-205ENST00000485746 SIK3Q9Y2K2 1263 aa13.03□□□□□ -0.32
PTCD1-205ENST00000485746 MYO16Q9Y6X6 1858 aa13.02□□□□□ -0.32
PTCD1-205ENST00000485746 A0A0A0MRY4 1105 aa13.02□□□□□ -0.33
PTCD1-205ENST00000485746 TRIM24O15164 1050 aa13.02□□□□□ -0.33
PTCD1-205ENST00000485746 ACSL4O60488 711 aa13.02□□□□□ -0.33
PTCD1-205ENST00000485746 HSF2BPO75031 334 aa13.02□□□□□ -0.33
PTCD1-205ENST00000485746 APBB3O95704 486 aa13.02□□□□□ -0.33
PTCD1-205ENST00000485746 CCDC172P0C7W6 258 aa13.02□□□□□ -0.33
PTCD1-205ENST00000485746 TDGF1P13385 188 aa13.02□□□□□ -0.33
PTCD1-205ENST00000485746 HOXD11P31277 338 aaPredicted RBP13.02□□□□□ -0.33
PTCD1-205ENST00000485746 DGKEP52429 567 aa13.02□□□□□ -0.33
PTCD1-205ENST00000485746 ZNF445P59923 1031 aa13.02□□□□□ -0.33
PTCD1-205ENST00000485746 SLC6A3Q01959 620 aa13.02□□□□□ -0.33
PTCD1-205ENST00000485746 RING1Q06587 406 aa13.02□□□□□ -0.33
PTCD1-205ENST00000485746 DMWDQ09019 674 aa13.02□□□□□ -0.33
PTCD1-205ENST00000485746 MESP2Q0VG99 397 aa13.02□□□□□ -0.33
PTCD1-205ENST00000485746 TAF5Q15542 800 aa13.02□□□□□ -0.33
PTCD1-205ENST00000485746 HSF5Q4G112 596 aaPredicted RBP13.02□□□□□ -0.33
PTCD1-205ENST00000485746 ADGRF1Q5T601 910 aa13.02□□□□□ -0.33
PTCD1-205ENST00000485746 BEND5Q7L4P6 421 aa13.02□□□□□ -0.33
PTCD1-205ENST00000485746 TAC4Q86UU9 113 aa13.02□□□□□ -0.33
PTCD1-205ENST00000485746 WDR5BQ86VZ2 330 aa13.02□□□□□ -0.33
PTCD1-205ENST00000485746 ZNF677Q86XU0 584 aa13.02□□□□□ -0.33
PTCD1-205ENST00000485746 ZDHHC17Q8IUH5 632 aa13.02□□□□□ -0.33
PTCD1-205ENST00000485746 DEFB106AQ8N104 65 aa13.02□□□□□ -0.33
PTCD1-205ENST00000485746 PGBD3Q8N328 593 aa13.02□□□□□ -0.33
PTCD1-205ENST00000485746 ZNF513Q8N8E2 541 aaPredicted RBP13.02□□□□□ -0.33
PTCD1-205ENST00000485746 UCMAQ8WVF2 138 aa13.02□□□□□ -0.33
PTCD1-205ENST00000485746 CPA5Q8WXQ8 436 aa13.02□□□□□ -0.33
PTCD1-205ENST00000485746 C18orf8Q96DM3 657 aa13.02□□□□□ -0.33
PTCD1-205ENST00000485746 CBX8Q9HC52 389 aa13.02□□□□□ -0.33
PTCD1-205ENST00000485746 POLMQ9NP87 494 aaPredicted RBP13.02□□□□□ -0.33
PTCD1-205ENST00000485746 ASNSD1Q9NWL6 643 aa13.02□□□□□ -0.33
PTCD1-205ENST00000485746 NCDNQ9UBB6 729 aa13.02□□□□□ -0.33
PTCD1-205ENST00000485746 MMP17Q9ULZ9 603 aa13.02□□□□□ -0.33
PTCD1-205ENST00000485746 TLR6Q9Y2C9 796 aa13.02□□□□□ -0.33
PTCD1-205ENST00000485746 PATJQ8NI35 1801 aa13.02□□□□□ -0.33
PTCD1-205ENST00000485746 GOLGA6L7A0A1B0GV03 622 aa13.01□□□□□ -0.33
PTCD1-205ENST00000485746 GOLGA8SH3BPF8 625 aa13.01□□□□□ -0.33
PTCD1-205ENST00000485746 AXIN1O15169 862 aa13.01□□□□□ -0.33
PTCD1-205ENST00000485746 EPHB6O15197 1021 aa13.01□□□□□ -0.33
PTCD1-205ENST00000485746 TEX33O43247 280 aa13.01□□□□□ -0.33
PTCD1-205ENST00000485746 TBL1XO60907 577 aa13.01□□□□□ -0.33
PTCD1-205ENST00000485746 LSM8O95777 96 aaKnown RBP13.01□□□□□ -0.33
PTCD1-205ENST00000485746 TRUB2O95900 331 aaKnown RBP13.01□□□□□ -0.33
PTCD1-205ENST00000485746 FYNP06241 537 aa13.01□□□□□ -0.33
PTCD1-205ENST00000485746 CNR2P34972 360 aa13.01□□□□□ -0.33
PTCD1-205ENST00000485746 WASP42768 502 aa13.01□□□□□ -0.33
PTCD1-205ENST00000485746 NNTQ13423 1086 aa13.01□□□□□ -0.33
PTCD1-205ENST00000485746 SIM2Q14190 667 aaPredicted RBP13.01□□□□□ -0.33
PTCD1-205ENST00000485746 LPAL2Q16609 132 aa13.01□□□□□ -0.33
PTCD1-205ENST00000485746 ZSCAN23Q3MJ62 389 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms