RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 GIPC1O14908 333 aa17.95■□□□□ 0.46
SMC4-216ENST00000485645 NPC1O15118 1278 aa17.95■□□□□ 0.46
SMC4-216ENST00000485645 VDRP11473 427 aa17.95■□□□□ 0.46
SMC4-216ENST00000485645 ENGP17813 658 aa17.95■□□□□ 0.46
SMC4-216ENST00000485645 CSRP1P21291 193 aaKnown RBP17.95■□□□□ 0.46
SMC4-216ENST00000485645 TBXAS1P24557 533 aaPredicted RBP17.95■□□□□ 0.46
SMC4-216ENST00000485645 ZNF33AQ06730 810 aa17.95■□□□□ 0.46
SMC4-216ENST00000485645 LRMPQ12912 555 aa17.95■□□□□ 0.46
SMC4-216ENST00000485645 ST3GAL2Q16842 350 aa17.95■□□□□ 0.46
SMC4-216ENST00000485645 DUOXA1Q1HG43 343 aa17.95■□□□□ 0.46
SMC4-216ENST00000485645 CPXM2Q8N436 756 aa17.95■□□□□ 0.46
SMC4-216ENST00000485645 UCMAQ8WVF2 138 aa17.95■□□□□ 0.46
SMC4-216ENST00000485645 MRGPRX1Q96LB2 322 aa17.95■□□□□ 0.46
SMC4-216ENST00000485645 IPO9Q96P70 1041 aaKnown RBP17.95■□□□□ 0.46
SMC4-216ENST00000485645 STON1Q9Y6Q2 735 aa17.95■□□□□ 0.46
SMC4-216ENST00000485645 ASCC3Q8N3C0 2202 aaKnown RBP17.94■□□□□ 0.46
SMC4-216ENST00000485645 PSMA7O14818 248 aa17.94■□□□□ 0.46
SMC4-216ENST00000485645 CFIP05156 583 aa17.94■□□□□ 0.46
SMC4-216ENST00000485645 CEACAM1P13688 526 aa17.94■□□□□ 0.46
SMC4-216ENST00000485645 MAPK8P45983 427 aa17.94■□□□□ 0.46
SMC4-216ENST00000485645 FMO5P49326 533 aa17.94■□□□□ 0.46
SMC4-216ENST00000485645 ADIGQ0VDE8 80 aa17.94■□□□□ 0.46
SMC4-216ENST00000485645 STARD3Q14849 445 aa17.94■□□□□ 0.46
SMC4-216ENST00000485645 E2F5Q15329 346 aa17.94■□□□□ 0.46
SMC4-216ENST00000485645 GEN1Q17RS7 908 aa17.94■□□□□ 0.46
SMC4-216ENST00000485645 RABEPKQ7Z6M1 372 aa17.94■□□□□ 0.46
SMC4-216ENST00000485645 SIX6OS1Q8N1H7 587 aa17.94■□□□□ 0.46
SMC4-216ENST00000485645 UBA3Q8TBC4 463 aa17.94■□□□□ 0.46
SMC4-216ENST00000485645 DDI1Q8WTU0 396 aa17.94■□□□□ 0.46
SMC4-216ENST00000485645 RNF139Q8WU17 664 aa17.94■□□□□ 0.46
SMC4-216ENST00000485645 NDRG1Q92597 394 aaKnown RBP17.94■□□□□ 0.46
SMC4-216ENST00000485645 DHTKD1Q96HY7 919 aaPredicted RBP17.94■□□□□ 0.46
SMC4-216ENST00000485645 THAP10Q9P2Z0 257 aaPredicted RBP17.94■□□□□ 0.46
SMC4-216ENST00000485645 KIAA1257Q9ULG3 409 aa17.94■□□□□ 0.46
SMC4-216ENST00000485645 SLC6A14Q9UN76 642 aa17.94■□□□□ 0.46
SMC4-216ENST00000485645 O00370 1275 aa17.93■□□□□ 0.46
SMC4-216ENST00000485645 NDUFS2O75306 463 aa17.93■□□□□ 0.46
SMC4-216ENST00000485645 SERPINF2P08697 491 aa17.93■□□□□ 0.46
SMC4-216ENST00000485645 SETSIPP0DME0 302 aa17.93■□□□□ 0.46
SMC4-216ENST00000485645 PPP1R2P41236 205 aa17.93■□□□□ 0.46
SMC4-216ENST00000485645 HARS2P49590 506 aaKnown RBP17.93■□□□□ 0.46
SMC4-216ENST00000485645 ZNF132P52740 706 aa17.93■□□□□ 0.46
SMC4-216ENST00000485645 ATXN3P54252 364 aaPredicted RBP17.93■□□□□ 0.46
SMC4-216ENST00000485645 GFPT1Q06210 699 aaPredicted RBP17.93■□□□□ 0.46
SMC4-216ENST00000485645 ZNF252P-AS1Q0IIN9 211 aa17.93■□□□□ 0.46
SMC4-216ENST00000485645 TRIP4Q15650 581 aaPredicted RBP17.93■□□□□ 0.46
SMC4-216ENST00000485645 ISM2Q6H9L7 571 aa17.93■□□□□ 0.46
SMC4-216ENST00000485645 KIAA1324Q6UXG2 1013 aaKnown RBP17.93■□□□□ 0.46
SMC4-216ENST00000485645 BHLHA9Q7RTU4 235 aa17.93■□□□□ 0.46
SMC4-216ENST00000485645 ANKS1BQ7Z6G8 1248 aa17.93■□□□□ 0.46
SMC4-216ENST00000485645 FMNL3Q8IVF7 1028 aa17.93■□□□□ 0.46
SMC4-216ENST00000485645 FAM217AQ8IXS0 508 aa17.93■□□□□ 0.46
SMC4-216ENST00000485645 UBR7Q8N806 425 aa17.93■□□□□ 0.46
SMC4-216ENST00000485645 KCTD13Q8WZ19 329 aa17.93■□□□□ 0.46
SMC4-216ENST00000485645 PIWIL1Q96J94 861 aaKnown RBP17.93■□□□□ 0.46
SMC4-216ENST00000485645 CEP63Q96MT8 703 aa17.93■□□□□ 0.46
SMC4-216ENST00000485645 SLC2A11Q9BYW1 496 aa17.93■□□□□ 0.46
SMC4-216ENST00000485645 SLC6A17Q9H1V8 727 aa17.93■□□□□ 0.46
SMC4-216ENST00000485645 HBS1LQ9Y450 684 aaKnown RBP17.93■□□□□ 0.46
SMC4-216ENST00000485645 PAEPP09466 180 aa17.92■□□□□ 0.46
SMC4-216ENST00000485645 IL12RB1P42701 662 aa17.92■□□□□ 0.46
SMC4-216ENST00000485645 EIF4HQ15056 248 aaKnown RBP17.92■□□□□ 0.46
SMC4-216ENST00000485645 FUT11Q495W5 492 aa17.92■□□□□ 0.46
SMC4-216ENST00000485645 CCDC40Q4G0X9 1142 aa17.92■□□□□ 0.46
SMC4-216ENST00000485645 MPPE1Q53F39 396 aa17.92■□□□□ 0.46
SMC4-216ENST00000485645 BSPRYQ5W0U4 402 aa17.92■□□□□ 0.46
SMC4-216ENST00000485645 TMEM270Q6UE05 265 aa17.92■□□□□ 0.46
SMC4-216ENST00000485645 SLC41A1Q8IVJ1 513 aa17.92■□□□□ 0.46
SMC4-216ENST00000485645 ELOA2Q8IYF1 753 aaPredicted RBP17.92■□□□□ 0.46
SMC4-216ENST00000485645 TRIML1Q8N9V2 468 aa17.92■□□□□ 0.46
SMC4-216ENST00000485645 EDEM1Q92611 657 aa17.92■□□□□ 0.46
SMC4-216ENST00000485645 HSPA12BQ96MM6 686 aa17.92■□□□□ 0.46
SMC4-216ENST00000485645 NT5C1BQ96P26 610 aa17.92■□□□□ 0.46
SMC4-216ENST00000485645 SLC32A1Q9H598 525 aa17.92■□□□□ 0.46
SMC4-216ENST00000485645 PRDM16Q9HAZ2 1276 aa17.92■□□□□ 0.46
SMC4-216ENST00000485645 CD93Q9NPY3 652 aa17.92■□□□□ 0.46
SMC4-216ENST00000485645 CNGB3Q9NQW8 809 aa17.92■□□□□ 0.46
SMC4-216ENST00000485645 ABCC13Q9NSE7 274 aa17.92■□□□□ 0.46
SMC4-216ENST00000485645 ELOVL2Q9NXB9 296 aa17.92■□□□□ 0.46
SMC4-216ENST00000485645 SFMBT1Q9UHJ3 866 aa17.92■□□□□ 0.46
SMC4-216ENST00000485645 CLEC4EQ9ULY5 219 aa17.92■□□□□ 0.46
SMC4-216ENST00000485645 PCDHB4Q9Y5E5 795 aa17.92■□□□□ 0.46
SMC4-216ENST00000485645 KMT2BQ9UMN6 2715 aaPredicted RBP17.91■□□□□ 0.46
SMC4-216ENST00000485645 YJEFN3A6XGL0 299 aa17.91■□□□□ 0.46
SMC4-216ENST00000485645 E7ENQ6 273 aa17.91■□□□□ 0.46
SMC4-216ENST00000485645 PMM2O15305 246 aa17.91■□□□□ 0.46
SMC4-216ENST00000485645 SYNCRIPO60506 623 aaKnown RBP17.91■□□□□ 0.46
SMC4-216ENST00000485645 KRT37O76014 449 aa17.91■□□□□ 0.46
SMC4-216ENST00000485645 LCP1P13796 627 aa17.91■□□□□ 0.46
SMC4-216ENST00000485645 CETN1Q12798 172 aa17.91■□□□□ 0.46
SMC4-216ENST00000485645 ENPP2Q13822 863 aa17.91■□□□□ 0.46
SMC4-216ENST00000485645 PKDCCQ504Y2 493 aa17.91■□□□□ 0.46
SMC4-216ENST00000485645 LCLAT1Q6UWP7 414 aa17.91■□□□□ 0.46
SMC4-216ENST00000485645 METTL3Q86U44 580 aaKnown RBP17.91■□□□□ 0.46
SMC4-216ENST00000485645 RGL4Q8IZJ4 473 aa17.91■□□□□ 0.46
SMC4-216ENST00000485645 SCML4Q8N228 414 aa17.91■□□□□ 0.46
SMC4-216ENST00000485645 DEFB124Q8NES8 71 aa17.91■□□□□ 0.46
SMC4-216ENST00000485645 FOXJ1Q92949 421 aa17.91■□□□□ 0.46
SMC4-216ENST00000485645 ZNF419Q96HQ0 510 aaPredicted RBP17.91■□□□□ 0.46
SMC4-216ENST00000485645 GTPBP2Q9BX10 602 aaKnown RBP17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms