RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 UGDHO60701 494 aa4.84□□□□□ -1.63
SMC4-215ENST00000484799 RHCEP18577 417 aa4.84□□□□□ -1.63
SMC4-215ENST00000484799 DUSP1P28562 367 aa4.84□□□□□ -1.63
SMC4-215ENST00000484799 CDKN2AP42771 156 aaKnown RBP4.84□□□□□ -1.63
SMC4-215ENST00000484799 ALDH7A1P49419 539 aaKnown RBP4.84□□□□□ -1.63
SMC4-215ENST00000484799 RHDQ02161 417 aa4.84□□□□□ -1.63
SMC4-215ENST00000484799 SEMA5AQ13591 1074 aa4.84□□□□□ -1.63
SMC4-215ENST00000484799 GBX1Q14549 363 aa4.84□□□□□ -1.63
SMC4-215ENST00000484799 LCE1AQ5T7P2 110 aa4.84□□□□□ -1.63
SMC4-215ENST00000484799 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.84□□□□□ -1.63
SMC4-215ENST00000484799 ATP11CQ8NB49 1132 aa4.84□□□□□ -1.63
SMC4-215ENST00000484799 SUN3Q8TAQ9 357 aa4.84□□□□□ -1.63
SMC4-215ENST00000484799 ADAMTS15Q8TE58 950 aa4.84□□□□□ -1.63
SMC4-215ENST00000484799 PHKBQ93100 1093 aa4.84□□□□□ -1.63
SMC4-215ENST00000484799 SLC25A28Q96A46 364 aa4.84□□□□□ -1.63
SMC4-215ENST00000484799 LYZL4Q96KX0 146 aa4.84□□□□□ -1.63
SMC4-215ENST00000484799 HTATIP2Q9BUP3 242 aa4.84□□□□□ -1.63
SMC4-215ENST00000484799 TM2D2Q9BX73 214 aa4.84□□□□□ -1.63
SMC4-215ENST00000484799 SAP30LQ9HAJ7 183 aa4.84□□□□□ -1.63
SMC4-215ENST00000484799 ASNSD1Q9NWL6 643 aa4.84□□□□□ -1.63
SMC4-215ENST00000484799 ANAPC4Q9UJX5 808 aa4.84□□□□□ -1.63
SMC4-215ENST00000484799 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.84□□□□□ -1.63
SMC4-215ENST00000484799 SIRT4Q9Y6E7 314 aaPredicted RBP4.84□□□□□ -1.63
SMC4-215ENST00000484799 C2CD4BA6NLJ0 364 aa4.83□□□□□ -1.64
SMC4-215ENST00000484799 TFEBP19484 476 aa4.83□□□□□ -1.64
SMC4-215ENST00000484799 MATN1P21941 496 aa4.83□□□□□ -1.64
SMC4-215ENST00000484799 RPS6KB1P23443 525 aa4.83□□□□□ -1.64
SMC4-215ENST00000484799 IGHMBP2P38935 993 aaKnown RBP4.83□□□□□ -1.64
SMC4-215ENST00000484799 PBX1P40424 430 aa4.83□□□□□ -1.64
SMC4-215ENST00000484799 B4GALNT1Q00973 533 aa4.83□□□□□ -1.64
SMC4-215ENST00000484799 CBFBQ13951 182 aa4.83□□□□□ -1.64
SMC4-215ENST00000484799 DAG1Q14118 895 aa4.83□□□□□ -1.64
SMC4-215ENST00000484799 ACOX1Q15067 660 aa4.83□□□□□ -1.64
SMC4-215ENST00000484799 PRTGQ2VWP7 1150 aa4.83□□□□□ -1.64
SMC4-215ENST00000484799 MIDNQ504T8 468 aa4.83□□□□□ -1.64
SMC4-215ENST00000484799 GRHL2Q6ISB3 625 aa4.83□□□□□ -1.64
SMC4-215ENST00000484799 KRT28Q7Z3Y7 464 aa4.83□□□□□ -1.64
SMC4-215ENST00000484799 SLC44A5Q8NCS7 719 aa4.83□□□□□ -1.64
SMC4-215ENST00000484799 ACRBPQ8NEB7 543 aa4.83□□□□□ -1.64
SMC4-215ENST00000484799 TTC8Q8TAM2 541 aa4.83□□□□□ -1.64
SMC4-215ENST00000484799 AKAP1Q92667 903 aaKnown RBP eCLIP4.83□□□□□ -1.64
SMC4-215ENST00000484799 PRR11Q96HE9 360 aaPredicted RBP4.83□□□□□ -1.64
SMC4-215ENST00000484799 TTLL2Q9BWV7 592 aa4.83□□□□□ -1.64
SMC4-215ENST00000484799 ABHD10Q9NUJ1 306 aa4.83□□□□□ -1.64
SMC4-215ENST00000484799 VPS51Q9UID3 782 aa4.83□□□□□ -1.64
SMC4-215ENST00000484799 FAM90A8PA6NJQ4 464 aa4.82□□□□□ -1.64
SMC4-215ENST00000484799 AREL1O15033 823 aa4.82□□□□□ -1.64
SMC4-215ENST00000484799 CNOT3O75175 753 aaKnown RBP4.82□□□□□ -1.64
SMC4-215ENST00000484799 ENO1P06733 434 aaKnown RBP4.82□□□□□ -1.64
SMC4-215ENST00000484799 FAM90A13PP0C7W8 464 aa4.82□□□□□ -1.64
SMC4-215ENST00000484799 FAM90A24PP0C7X0 464 aa4.82□□□□□ -1.64
SMC4-215ENST00000484799 TGFB3P10600 412 aa4.82□□□□□ -1.64
SMC4-215ENST00000484799 ST6GAL1P15907 406 aa4.82□□□□□ -1.64
SMC4-215ENST00000484799 LINC00205P59089 165 aa4.82□□□□□ -1.64
SMC4-215ENST00000484799 RAE1P78406 368 aaKnown RBP4.82□□□□□ -1.64
SMC4-215ENST00000484799 LEXMQ3ZCV2 418 aa4.82□□□□□ -1.64
SMC4-215ENST00000484799 KLHL22Q53GT1 634 aa4.82□□□□□ -1.64
SMC4-215ENST00000484799 ZNF549Q6P9A3 640 aa4.82□□□□□ -1.64
SMC4-215ENST00000484799 TLDC1Q6P9B6 456 aa4.82□□□□□ -1.64
SMC4-215ENST00000484799 USP17L6PQ6QN14 398 aa4.82□□□□□ -1.64
SMC4-215ENST00000484799 CRTC1Q6UUV9 634 aa4.82□□□□□ -1.64
SMC4-215ENST00000484799 DHRS13Q6UX07 377 aa4.82□□□□□ -1.64
SMC4-215ENST00000484799 RBM44Q6ZP01 1051 aaKnown RBP4.82□□□□□ -1.64
SMC4-215ENST00000484799 KRT27Q7Z3Y8 459 aa4.82□□□□□ -1.64
SMC4-215ENST00000484799 FMNL3Q8IVF7 1028 aa4.82□□□□□ -1.64
SMC4-215ENST00000484799 CELF1Q92879 486 aaKnown RBP4.82□□□□□ -1.64
SMC4-215ENST00000484799 MARK4Q96L34 752 aa4.82□□□□□ -1.64
SMC4-215ENST00000484799 RNF26Q9BY78 433 aaPredicted RBP4.82□□□□□ -1.64
SMC4-215ENST00000484799 HIPK2Q9H2X6 1198 aa4.82□□□□□ -1.64
SMC4-215ENST00000484799 PAPOLBQ9NRJ5 636 aaKnown RBP4.82□□□□□ -1.64
SMC4-215ENST00000484799 ZNF580Q9UK33 172 aa4.82□□□□□ -1.64
SMC4-215ENST00000484799 SLC8A2Q9UPR5 921 aa4.82□□□□□ -1.64
SMC4-215ENST00000484799 POM121BA6NF01 834 aa4.81□□□□□ -1.64
SMC4-215ENST00000484799 F8W8V4 182 aa4.81□□□□□ -1.64
SMC4-215ENST00000484799 RRHO14718 337 aa4.81□□□□□ -1.64
SMC4-215ENST00000484799 SRGAP2BP0DMP2 458 aa4.81□□□□□ -1.64
SMC4-215ENST00000484799 CIITAP33076 1130 aa4.81□□□□□ -1.64
SMC4-215ENST00000484799 KCNJ12Q14500 433 aa4.81□□□□□ -1.64
SMC4-215ENST00000484799 ELF2Q15723 593 aa4.81□□□□□ -1.64
SMC4-215ENST00000484799 ANXA2RQ3ZCQ2 193 aa4.81□□□□□ -1.64
SMC4-215ENST00000484799 MRNIPQ6NTE8 343 aa4.81□□□□□ -1.64
SMC4-215ENST00000484799 TRAPPC11Q7Z392 1133 aa4.81□□□□□ -1.64
SMC4-215ENST00000484799 TMEM199Q8N511 208 aa4.81□□□□□ -1.64
SMC4-215ENST00000484799 OVCA2Q8WZ82 227 aa4.81□□□□□ -1.64
SMC4-215ENST00000484799 CENPIQ92674 756 aaPredicted RBP4.81□□□□□ -1.64
SMC4-215ENST00000484799 TSR2Q969E8 191 aaKnown RBP4.81□□□□□ -1.64
SMC4-215ENST00000484799 KAZALD1Q96I82 304 aa4.81□□□□□ -1.64
SMC4-215ENST00000484799 SNX27Q96L92 541 aa4.81□□□□□ -1.64
SMC4-215ENST00000484799 MLXIPQ9HAP2 919 aa4.81□□□□□ -1.64
SMC4-215ENST00000484799 SEMA4BQ9NPR2 832 aaPredicted RBP4.81□□□□□ -1.64
SMC4-215ENST00000484799 COG5Q9UP83 839 aa4.81□□□□□ -1.64
SMC4-215ENST00000484799 CEP83Q9Y592 693 aa4.81□□□□□ -1.64
SMC4-215ENST00000484799 ZNF335Q9H4Z2 1342 aaPredicted RBP4.8□□□□□ -1.64
SMC4-215ENST00000484799 SLC22A23A1A5C7 686 aa4.8□□□□□ -1.64
SMC4-215ENST00000484799 MYL4P12829 197 aa4.8□□□□□ -1.64
SMC4-215ENST00000484799 AKR1A1P14550 325 aa4.8□□□□□ -1.64
SMC4-215ENST00000484799 HOXA7P31268 230 aaPredicted RBP4.8□□□□□ -1.64
SMC4-215ENST00000484799 SLC8A1P32418 973 aa4.8□□□□□ -1.64
SMC4-215ENST00000484799 HOXD12P35452 270 aa4.8□□□□□ -1.64
SMC4-215ENST00000484799 MTAPQ13126 283 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms