RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 PPP1R1BQ9UD71 204 aaPredicted RBP12.18□□□□□ -0.46
VTI1A-205ENST00000483122 ZBTB21Q9ULJ3 1066 aa12.18□□□□□ -0.46
VTI1A-205ENST00000483122 C7orf72A4D263 438 aa12.18□□□□□ -0.46
VTI1A-205ENST00000483122 ZNF195O14628 629 aa12.18□□□□□ -0.46
VTI1A-205ENST00000483122 UFL1O94874 794 aa12.18□□□□□ -0.46
VTI1A-205ENST00000483122 ACAT1P24752 427 aaKnown RBP12.18□□□□□ -0.46
VTI1A-205ENST00000483122 THOP1P52888 689 aa12.18□□□□□ -0.46
VTI1A-205ENST00000483122 CDH15P55291 814 aa12.18□□□□□ -0.46
VTI1A-205ENST00000483122 NUP107P57740 925 aa12.18□□□□□ -0.46
VTI1A-205ENST00000483122 EIF3EP60228 445 aaKnown RBP12.18□□□□□ -0.46
VTI1A-205ENST00000483122 CTBSQ01459 385 aa12.18□□□□□ -0.46
VTI1A-205ENST00000483122 FLOT2Q14254 428 aa12.18□□□□□ -0.46
VTI1A-205ENST00000483122 KCNJ11Q14654 390 aa12.18□□□□□ -0.46
VTI1A-205ENST00000483122 NRF1Q16656 503 aa12.18□□□□□ -0.46
VTI1A-205ENST00000483122 CEP55Q53EZ4 464 aa12.18□□□□□ -0.46
VTI1A-205ENST00000483122 FASTKD5Q7L8L6 764 aaKnown RBP12.18□□□□□ -0.46
VTI1A-205ENST00000483122 ARL10Q8N8L6 244 aa12.18□□□□□ -0.46
VTI1A-205ENST00000483122 RNF169Q8NCN4 708 aa12.18□□□□□ -0.46
VTI1A-205ENST00000483122 DEPTORQ8TB45 409 aa12.18□□□□□ -0.46
VTI1A-205ENST00000483122 SORT1Q99523 831 aa12.18□□□□□ -0.46
VTI1A-205ENST00000483122 WDR11Q9BZH6 1224 aa12.18□□□□□ -0.46
VTI1A-205ENST00000483122 STN1Q9H668 368 aaKnown RBP12.18□□□□□ -0.46
VTI1A-205ENST00000483122 CAAP1Q9H8G2 361 aa12.18□□□□□ -0.46
VTI1A-205ENST00000483122 MAN1C1Q9NR34 630 aa12.18□□□□□ -0.46
VTI1A-205ENST00000483122 EMCNQ9ULC0 261 aa12.18□□□□□ -0.46
VTI1A-205ENST00000483122 TBX20Q9UMR3 447 aa12.18□□□□□ -0.46
VTI1A-205ENST00000483122 EXOC7Q9UPT5 735 aa12.18□□□□□ -0.46
VTI1A-205ENST00000483122 LOXHD1Q8IVV2 1947 aa12.17□□□□□ -0.46
VTI1A-205ENST00000483122 MATN2O00339 956 aa12.17□□□□□ -0.46
VTI1A-205ENST00000483122 AIM2O14862 343 aa12.17□□□□□ -0.46
VTI1A-205ENST00000483122 SPAG6O75602 509 aa12.17□□□□□ -0.46
VTI1A-205ENST00000483122 STAMBPO95630 424 aa12.17□□□□□ -0.46
VTI1A-205ENST00000483122 HLA-DRAP01903 254 aa12.17□□□□□ -0.46
VTI1A-205ENST00000483122 IL1R1P14778 569 aa12.17□□□□□ -0.46
VTI1A-205ENST00000483122 PTPN1P18031 435 aaKnown RBP12.17□□□□□ -0.46
VTI1A-205ENST00000483122 MMP8P22894 467 aa12.17□□□□□ -0.46
VTI1A-205ENST00000483122 IL1R2P27930 398 aa12.17□□□□□ -0.46
VTI1A-205ENST00000483122 ACADVLP49748 655 aa12.17□□□□□ -0.46
VTI1A-205ENST00000483122 STAT2P52630 851 aa12.17□□□□□ -0.46
VTI1A-205ENST00000483122 MS4A2Q01362 244 aa12.17□□□□□ -0.46
VTI1A-205ENST00000483122 KLF10Q13118 480 aa12.17□□□□□ -0.46
VTI1A-205ENST00000483122 GRAPQ13588 217 aa12.17□□□□□ -0.46
VTI1A-205ENST00000483122 LGSNQ5TDP6 509 aa12.17□□□□□ -0.46
VTI1A-205ENST00000483122 DNAJC24Q6P3W2 148 aa12.17□□□□□ -0.46
VTI1A-205ENST00000483122 BBS12Q6ZW61 710 aa12.17□□□□□ -0.46
VTI1A-205ENST00000483122 RNF148Q8N7C7 305 aa12.17□□□□□ -0.46
VTI1A-205ENST00000483122 GRAPLQ8TC17 118 aaPredicted RBP12.17□□□□□ -0.46
VTI1A-205ENST00000483122 RTKNQ9BST9 563 aa12.17□□□□□ -0.46
VTI1A-205ENST00000483122 INO80BQ9C086 356 aaPredicted RBP12.17□□□□□ -0.46
VTI1A-205ENST00000483122 PAIP1Q9H074 479 aaKnown RBP12.17□□□□□ -0.46
VTI1A-205ENST00000483122 POPDC2Q9HBU9 364 aa12.17□□□□□ -0.46
VTI1A-205ENST00000483122 DNAJC28Q9NX36 388 aa12.17□□□□□ -0.46
VTI1A-205ENST00000483122 KIAA1522Q9P206 1035 aaPredicted RBP12.17□□□□□ -0.46
VTI1A-205ENST00000483122 EPS15L1Q9UBC2 864 aa12.17□□□□□ -0.46
VTI1A-205ENST00000483122 ZC3H7BQ9UGR2 993 aaKnown RBP12.17□□□□□ -0.46
VTI1A-205ENST00000483122 AFG3L2Q9Y4W6 797 aa12.17□□□□□ -0.46
VTI1A-205ENST00000483122 CNTNAP2Q9UHC6 1331 aa12.17□□□□□ -0.46
VTI1A-205ENST00000483122 TCRBV5S1A1TA0A578 114 aa12.17□□□□□ -0.46
VTI1A-205ENST00000483122 GSTT2P0CG29 244 aa12.17□□□□□ -0.46
VTI1A-205ENST00000483122 GSTT2BP0CG30 244 aa12.17□□□□□ -0.46
VTI1A-205ENST00000483122 HSPA13P48723 471 aa12.17□□□□□ -0.46
VTI1A-205ENST00000483122 BCAP31P51572 246 aa12.17□□□□□ -0.46
VTI1A-205ENST00000483122 PKNOX1P55347 436 aa12.17□□□□□ -0.46
VTI1A-205ENST00000483122 WNT7BP56706 349 aa12.17□□□□□ -0.46
VTI1A-205ENST00000483122 SNRPFP62306 86 aaKnown RBP12.17□□□□□ -0.46
VTI1A-205ENST00000483122 PPP2R5DQ14738 602 aa12.17□□□□□ -0.46
VTI1A-205ENST00000483122 AOC3Q16853 763 aa12.17□□□□□ -0.46
VTI1A-205ENST00000483122 WDR44Q5JSH3 913 aa12.17□□□□□ -0.46
VTI1A-205ENST00000483122 OGFOD2Q6N063 350 aa12.17□□□□□ -0.46
VTI1A-205ENST00000483122 TRMT10BQ6PF06 316 aaKnown RBP12.17□□□□□ -0.46
VTI1A-205ENST00000483122 OLFML1Q6UWY5 402 aa12.17□□□□□ -0.46
VTI1A-205ENST00000483122 NPNTQ6UXI9 565 aa12.17□□□□□ -0.46
VTI1A-205ENST00000483122 DCDC5Q6ZRR9 648 aa12.17□□□□□ -0.46
VTI1A-205ENST00000483122 MIER3Q7Z3K6 550 aa12.17□□□□□ -0.46
VTI1A-205ENST00000483122 TRIM50Q86XT4 487 aa12.17□□□□□ -0.46
VTI1A-205ENST00000483122 CLVS1Q8IUQ0 354 aaPredicted RBP12.17□□□□□ -0.46
VTI1A-205ENST00000483122 UBR7Q8N806 425 aa12.17□□□□□ -0.46
VTI1A-205ENST00000483122 GSDMBQ8TAX9 411 aa12.17□□□□□ -0.46
VTI1A-205ENST00000483122 KCNN1Q92952 543 aa12.17□□□□□ -0.46
VTI1A-205ENST00000483122 FAF2Q96CS3 445 aa12.17□□□□□ -0.46
VTI1A-205ENST00000483122 NEURL2Q9BR09 285 aa12.17□□□□□ -0.46
VTI1A-205ENST00000483122 GCOM2Q9BZD3 368 aaPredicted RBP12.17□□□□□ -0.46
VTI1A-205ENST00000483122 ST6GALNAC4Q9H4F1 302 aa12.17□□□□□ -0.46
VTI1A-205ENST00000483122 APOBEC3GQ9HC16 384 aaKnown RBP12.17□□□□□ -0.46
VTI1A-205ENST00000483122 ANLNQ9NQW6 1124 aa12.17□□□□□ -0.46
VTI1A-205ENST00000483122 HOMER2Q9NSB8 354 aa12.17□□□□□ -0.46
VTI1A-205ENST00000483122 TBC1D22BQ9NU19 505 aa12.17□□□□□ -0.46
VTI1A-205ENST00000483122 TBC1D23Q9NUY8 699 aa12.17□□□□□ -0.46
VTI1A-205ENST00000483122 TMED5Q9Y3A6 229 aa12.17□□□□□ -0.46
VTI1A-205ENST00000483122 PRSS51A0A1B0GVH4 220 aa12.16□□□□□ -0.46
VTI1A-205ENST00000483122 KLHL41O60662 606 aa12.16□□□□□ -0.46
VTI1A-205ENST00000483122 ZC3H11AO75152 810 aaKnown RBP eCLIP12.16□□□□□ -0.46
VTI1A-205ENST00000483122 KRT38O76015 456 aa12.16□□□□□ -0.46
VTI1A-205ENST00000483122 H6PDO95479 791 aa12.16□□□□□ -0.46
VTI1A-205ENST00000483122 OCM2P0CE71 109 aa12.16□□□□□ -0.46
VTI1A-205ENST00000483122 OCMP0CE72 109 aaPredicted RBP12.16□□□□□ -0.46
VTI1A-205ENST00000483122 ZNF26P17031 533 aaPredicted RBP12.16□□□□□ -0.46
VTI1A-205ENST00000483122 PRKCHP24723 683 aa12.16□□□□□ -0.46
VTI1A-205ENST00000483122 RPL10P27635 214 aaKnown RBP12.16□□□□□ -0.46
VTI1A-205ENST00000483122 PRDX6P30041 224 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms