RNA–Protein interactions for RNA: ENST00000483086.1

HDLBP-239, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 620 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-239ENST00000483086 RSRC2Q7L4I2 434 aaKnown RBP12.62□□□□□ -0.39
HDLBP-239ENST00000483086 CACNA2D4Q7Z3S7 1137 aa12.62□□□□□ -0.39
HDLBP-239ENST00000483086 SCUBE3Q8IX30 993 aa12.62□□□□□ -0.39
HDLBP-239ENST00000483086 SIX6OS1Q8N1H7 587 aa12.62□□□□□ -0.39
HDLBP-239ENST00000483086 WFDC5Q8TCV5 224 aa12.62□□□□□ -0.39
HDLBP-239ENST00000483086 EXOC4Q96A65 974 aa12.62□□□□□ -0.39
HDLBP-239ENST00000483086 IPO9Q96P70 1041 aaKnown RBP12.62□□□□□ -0.39
HDLBP-239ENST00000483086 NUP62CLQ9H1M0 184 aa12.62□□□□□ -0.39
HDLBP-239ENST00000483086 CACNA2D2Q9NY47 1150 aa12.62□□□□□ -0.39
HDLBP-239ENST00000483086 RAB23Q9ULC3 237 aa12.62□□□□□ -0.39
HDLBP-239ENST00000483086 NAALADL1Q9UQQ1 740 aa12.62□□□□□ -0.39
HDLBP-239ENST00000483086 ASCC3Q8N3C0 2202 aaKnown RBP12.61□□□□□ -0.39
HDLBP-239ENST00000483086 TCRBV21S2A2A0A5A6 115 aa12.61□□□□□ -0.39
HDLBP-239ENST00000483086 MED19A0JLT2 244 aaPredicted RBP12.61□□□□□ -0.39
HDLBP-239ENST00000483086 FAM170AA1A519 330 aa12.61□□□□□ -0.39
HDLBP-239ENST00000483086 E5RJQ4 531 aa12.61□□□□□ -0.39
HDLBP-239ENST00000483086 TSPAN3O60637 253 aa12.61□□□□□ -0.39
HDLBP-239ENST00000483086 LETM1O95202 739 aaPredicted RBP12.61□□□□□ -0.39
HDLBP-239ENST00000483086 LTFP02788 710 aa12.61□□□□□ -0.39
HDLBP-239ENST00000483086 GABRG2P18507 467 aa12.61□□□□□ -0.39
HDLBP-239ENST00000483086 HOXD9P28356 352 aaPredicted RBP12.61□□□□□ -0.39
HDLBP-239ENST00000483086 SLC6A4P31645 630 aa12.61□□□□□ -0.39
HDLBP-239ENST00000483086 P2RY2P41231 377 aa12.61□□□□□ -0.39
HDLBP-239ENST00000483086 DGKGP49619 791 aa12.61□□□□□ -0.39
HDLBP-239ENST00000483086 ATXN1P54253 815 aaKnown RBP12.61□□□□□ -0.39
HDLBP-239ENST00000483086 SLC8A3P57103 927 aa12.61□□□□□ -0.39
HDLBP-239ENST00000483086 GOLGA8FQ08AF8 430 aa12.61□□□□□ -0.39
HDLBP-239ENST00000483086 GOLGA8DPQ0D2H9 430 aa12.61□□□□□ -0.39
HDLBP-239ENST00000483086 CETN1Q12798 172 aa12.61□□□□□ -0.39
HDLBP-239ENST00000483086 CSRP2Q16527 193 aa12.61□□□□□ -0.39
HDLBP-239ENST00000483086 MAP7D1Q3KQU3 841 aa12.61□□□□□ -0.39
HDLBP-239ENST00000483086 FAM133BQ5BKY9 247 aaKnown RBP12.61□□□□□ -0.39
HDLBP-239ENST00000483086 PMS2CLQ68D20 193 aa12.61□□□□□ -0.39
HDLBP-239ENST00000483086 ARHGAP18Q8N392 663 aa12.61□□□□□ -0.39
HDLBP-239ENST00000483086 CPXM2Q8N436 756 aa12.61□□□□□ -0.39
HDLBP-239ENST00000483086 ADAM32Q8TC27 787 aa12.61□□□□□ -0.39
HDLBP-239ENST00000483086 DQX1Q8TE96 717 aaKnown RBP12.61□□□□□ -0.39
HDLBP-239ENST00000483086 HMGB4Q8WW32 186 aa12.61□□□□□ -0.39
HDLBP-239ENST00000483086 SORCS1Q8WY21 1168 aa12.61□□□□□ -0.39
HDLBP-239ENST00000483086 SHC3Q92529 594 aa12.61□□□□□ -0.39
HDLBP-239ENST00000483086 PLD4Q96BZ4 506 aa12.61□□□□□ -0.39
HDLBP-239ENST00000483086 HSFY1Q96LI6 401 aa12.61□□□□□ -0.39
HDLBP-239ENST00000483086 CDK5RAP1Q96SZ6 601 aaKnown RBP12.61□□□□□ -0.39
HDLBP-239ENST00000483086 SLC4A5Q9BY07 1137 aa12.61□□□□□ -0.39
HDLBP-239ENST00000483086 DNAI2Q9GZS0 605 aa12.61□□□□□ -0.39
HDLBP-239ENST00000483086 THAP9Q9H5L6 903 aa12.61□□□□□ -0.39
HDLBP-239ENST00000483086 ABCC13Q9NSE7 274 aa12.61□□□□□ -0.39
HDLBP-239ENST00000483086 WDR35Q9P2L0 1181 aa12.61□□□□□ -0.39
HDLBP-239ENST00000483086 APEX2Q9UBZ4 518 aa12.61□□□□□ -0.39
HDLBP-239ENST00000483086 XPO7Q9UIA9 1087 aaKnown RBP12.61□□□□□ -0.39
HDLBP-239ENST00000483086 STOML2Q9UJZ1 356 aa12.61□□□□□ -0.39
HDLBP-239ENST00000483086 SLC27A6Q9Y2P4 619 aa12.61□□□□□ -0.39
HDLBP-239ENST00000483086 PCDH15Q96QU1 1955 aa12.61□□□□□ -0.39
HDLBP-239ENST00000483086 FRYQ5TBA9 3013 aa12.61□□□□□ -0.39
HDLBP-239ENST00000483086 FOXN3O00409 490 aaPredicted RBP12.6□□□□□ -0.39
HDLBP-239ENST00000483086 GNA15P30679 374 aa12.6□□□□□ -0.39
HDLBP-239ENST00000483086 CLCN1P35523 988 aa12.6□□□□□ -0.39
HDLBP-239ENST00000483086 ANP32AP39687 249 aaKnown RBP12.6□□□□□ -0.39
HDLBP-239ENST00000483086 IL12RB1P42701 662 aa12.6□□□□□ -0.39
HDLBP-239ENST00000483086 MTIF2P46199 727 aaKnown RBP12.6□□□□□ -0.39
HDLBP-239ENST00000483086 MAN2A1Q16706 1144 aa12.6□□□□□ -0.39
HDLBP-239ENST00000483086 EXOC3L4Q17RC7 722 aa12.6□□□□□ -0.39
HDLBP-239ENST00000483086 EOGTQ5NDL2 527 aa12.6□□□□□ -0.39
HDLBP-239ENST00000483086 RNF43Q68DV7 783 aa12.6□□□□□ -0.39
HDLBP-239ENST00000483086 RFWD3Q6PCD5 774 aa12.6□□□□□ -0.39
HDLBP-239ENST00000483086 GBP6Q6ZN66 633 aa12.6□□□□□ -0.39
HDLBP-239ENST00000483086 RBM43Q6ZSC3 357 aaKnown RBP12.6□□□□□ -0.39
HDLBP-239ENST00000483086 TADA2BQ86TJ2 420 aa12.6□□□□□ -0.39
HDLBP-239ENST00000483086 PASD1Q8IV76 773 aa12.6□□□□□ -0.39
HDLBP-239ENST00000483086 IRGQQ8WZA9 623 aa12.6□□□□□ -0.39
HDLBP-239ENST00000483086 FCRL2Q96LA5 508 aaPredicted RBP12.6□□□□□ -0.39
HDLBP-239ENST00000483086 PRICKLE1Q96MT3 831 aaPredicted RBP12.6□□□□□ -0.39
HDLBP-239ENST00000483086 XPO6Q96QU8 1125 aaKnown RBP12.6□□□□□ -0.39
HDLBP-239ENST00000483086 GABRG3Q99928 467 aa12.6□□□□□ -0.39
HDLBP-239ENST00000483086 ADAM33Q9BZ11 813 aa12.6□□□□□ -0.39
HDLBP-239ENST00000483086 STRIP2Q9ULQ0 834 aa12.6□□□□□ -0.39
HDLBP-239ENST00000483086 HBS1LQ9Y450 684 aaKnown RBP12.6□□□□□ -0.39
HDLBP-239ENST00000483086 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.59□□□□□ -0.39
HDLBP-239ENST00000483086 DCDC2BA2VCK2 349 aa12.59□□□□□ -0.39
HDLBP-239ENST00000483086 GTPBP10A4D1E9 387 aaKnown RBP12.59□□□□□ -0.39
HDLBP-239ENST00000483086 PATE3B3GLJ2 98 aa12.59□□□□□ -0.39
HDLBP-239ENST00000483086 THAP12O43422 761 aa12.59□□□□□ -0.39
HDLBP-239ENST00000483086 LRP3O75074 770 aa12.59□□□□□ -0.39
HDLBP-239ENST00000483086 FGFR1OPO95684 399 aaKnown RBP12.59□□□□□ -0.39
HDLBP-239ENST00000483086 HOXB2P14652 356 aa12.59□□□□□ -0.39
HDLBP-239ENST00000483086 NDUFV2P19404 249 aa12.59□□□□□ -0.39
HDLBP-239ENST00000483086 ERCC5P28715 1186 aaPredicted RBP12.59□□□□□ -0.39
HDLBP-239ENST00000483086 HLA-FP30511 346 aa12.59□□□□□ -0.39
HDLBP-239ENST00000483086 NTSR1P30989 418 aa12.59□□□□□ -0.39
HDLBP-239ENST00000483086 MPLP40238 635 aa12.59□□□□□ -0.39
HDLBP-239ENST00000483086 PTGER3P43115 390 aa12.59□□□□□ -0.39
HDLBP-239ENST00000483086 KLK7P49862 253 aa12.59□□□□□ -0.39
HDLBP-239ENST00000483086 EIF4EBP2Q13542 120 aaPredicted RBP12.59□□□□□ -0.39
HDLBP-239ENST00000483086 ENPP2Q13822 863 aa12.59□□□□□ -0.39
HDLBP-239ENST00000483086 STILQ15468 1287 aa12.59□□□□□ -0.39
HDLBP-239ENST00000483086 HSF5Q4G112 596 aaPredicted RBP12.59□□□□□ -0.39
HDLBP-239ENST00000483086 VWA3BQ502W6 1294 aa12.59□□□□□ -0.39
HDLBP-239ENST00000483086 C11orf57Q6ZUT1 292 aaPredicted RBP12.59□□□□□ -0.39
HDLBP-239ENST00000483086 TMEM110Q86TL2 294 aa12.59□□□□□ -0.39
HDLBP-239ENST00000483086 TAC4Q86UU9 113 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms