RNA–Protein interactions for RNA: ENST00000482614.5

EXOSC3-205, Transcript of exosome component 3, humanhuman

TSL 5

Gene EXOSC3, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-205ENST00000482614 ZNF445P59923 1031 aa16.02■□□□□ 0.16
EXOSC3-205ENST00000482614 FOXK2Q01167 660 aa16.02■□□□□ 0.16
EXOSC3-205ENST00000482614 MPPE1Q53F39 396 aa16.02■□□□□ 0.16
EXOSC3-205ENST00000482614 EGFLAMQ63HQ2 1017 aa16.02■□□□□ 0.16
EXOSC3-205ENST00000482614 PRR23CQ6ZRP0 262 aa16.02■□□□□ 0.16
EXOSC3-205ENST00000482614 OLIG1Q8TAK6 271 aa16.02■□□□□ 0.16
EXOSC3-205ENST00000482614 STK32AQ8WU08 396 aa16.02■□□□□ 0.16
EXOSC3-205ENST00000482614 SLC2A11Q9BYW1 496 aa16.02■□□□□ 0.16
EXOSC3-205ENST00000482614 MIS12Q9H081 205 aa16.02■□□□□ 0.16
EXOSC3-205ENST00000482614 ST7Q9NRC1 585 aa16.02■□□□□ 0.16
EXOSC3-205ENST00000482614 BCCIPQ9P287 314 aaKnown RBP eCLIP16.02■□□□□ 0.16
EXOSC3-205ENST00000482614 HCN2Q9UL51 889 aa16.02■□□□□ 0.16
EXOSC3-205ENST00000482614 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.02■□□□□ 0.16
EXOSC3-205ENST00000482614 TCRBV21S2A2A0A5A6 115 aa16.01■□□□□ 0.15
EXOSC3-205ENST00000482614 GFRA2O00451 464 aa16.01■□□□□ 0.15
EXOSC3-205ENST00000482614 ZBTB24O43167 697 aaPredicted RBP16.01■□□□□ 0.15
EXOSC3-205ENST00000482614 HOXB2P14652 356 aa16.01■□□□□ 0.15
EXOSC3-205ENST00000482614 USP8P40818 1118 aa16.01■□□□□ 0.15
EXOSC3-205ENST00000482614 WASP42768 502 aa16.01■□□□□ 0.15
EXOSC3-205ENST00000482614 BYSLQ13895 437 aaKnown RBP16.01■□□□□ 0.15
EXOSC3-205ENST00000482614 E2F5Q15329 346 aa16.01■□□□□ 0.15
EXOSC3-205ENST00000482614 VWA3BQ502W6 1294 aa16.01■□□□□ 0.15
EXOSC3-205ENST00000482614 DENND1BQ6P3S1 775 aa16.01■□□□□ 0.15
EXOSC3-205ENST00000482614 UNC45BQ8IWX7 931 aa16.01■□□□□ 0.15
EXOSC3-205ENST00000482614 CHPFQ8IZ52 775 aa16.01■□□□□ 0.15
EXOSC3-205ENST00000482614 PGBD3Q8N328 593 aa16.01■□□□□ 0.15
EXOSC3-205ENST00000482614 CLEC4CQ8WTT0 213 aa16.01■□□□□ 0.15
EXOSC3-205ENST00000482614 DDI1Q8WTU0 396 aa16.01■□□□□ 0.15
EXOSC3-205ENST00000482614 SHC3Q92529 594 aa16.01■□□□□ 0.15
EXOSC3-205ENST00000482614 P2RY11Q96G91 374 aa16.01■□□□□ 0.15
EXOSC3-205ENST00000482614 SPACA7Q96KW9 195 aa16.01■□□□□ 0.15
EXOSC3-205ENST00000482614 TUBGCP2Q9BSJ2 902 aa16.01■□□□□ 0.15
EXOSC3-205ENST00000482614 SLC4A5Q9BY07 1137 aa16.01■□□□□ 0.15
EXOSC3-205ENST00000482614 NDST4Q9H3R1 872 aa16.01■□□□□ 0.15
EXOSC3-205ENST00000482614 STOML2Q9UJZ1 356 aa16.01■□□□□ 0.15
EXOSC3-205ENST00000482614 CDV3Q9UKY7 258 aaKnown RBP16.01■□□□□ 0.15
EXOSC3-205ENST00000482614 INVSQ9Y283 1065 aa16.01■□□□□ 0.15
EXOSC3-205ENST00000482614 FRYLO94915 3013 aa16■□□□□ 0.15
EXOSC3-205ENST00000482614 BECN2A8MW95 431 aa16■□□□□ 0.15
EXOSC3-205ENST00000482614 NPC1O15118 1278 aa16■□□□□ 0.15
EXOSC3-205ENST00000482614 MSI1O43347 362 aaKnown RBP16■□□□□ 0.15
EXOSC3-205ENST00000482614 ZNF806P0C7X5 589 aa16■□□□□ 0.15
EXOSC3-205ENST00000482614 APBA1Q02410 837 aa16■□□□□ 0.15
EXOSC3-205ENST00000482614 RING1Q06587 406 aa16■□□□□ 0.15
EXOSC3-205ENST00000482614 ADGRF1Q5T601 910 aa16■□□□□ 0.15
EXOSC3-205ENST00000482614 NUGGCQ68CJ6 796 aa16■□□□□ 0.15
EXOSC3-205ENST00000482614 DGLUCYQ7Z3D6 616 aa16■□□□□ 0.15
EXOSC3-205ENST00000482614 SCUBE3Q8IX30 993 aa16■□□□□ 0.15
EXOSC3-205ENST00000482614 NETO1Q8TDF5 533 aa16■□□□□ 0.15
EXOSC3-205ENST00000482614 UCMAQ8WVF2 138 aa16■□□□□ 0.15
EXOSC3-205ENST00000482614 HMGB4Q8WW32 186 aa16■□□□□ 0.15
EXOSC3-205ENST00000482614 TRIM62Q9BVG3 475 aa16■□□□□ 0.15
EXOSC3-205ENST00000482614 IRX2Q9BZI1 471 aaPredicted RBP16■□□□□ 0.15
EXOSC3-205ENST00000482614 DNAJC12Q9UKB3 198 aa16■□□□□ 0.15
EXOSC3-205ENST00000482614 THADAQ6YHU6 1953 aa16■□□□□ 0.15
EXOSC3-205ENST00000482614 SDK1Q7Z5N4 2213 aa15.99■□□□□ 0.15
EXOSC3-205ENST00000482614 SPTBN4Q9H254 2564 aa15.99■□□□□ 0.15
EXOSC3-205ENST00000482614 GOLGA6L22H0YM25 854 aa15.99■□□□□ 0.15
EXOSC3-205ENST00000482614 TSPAN3O60637 253 aa15.99■□□□□ 0.15
EXOSC3-205ENST00000482614 IGLV3-27P01718 113 aa15.99■□□□□ 0.15
EXOSC3-205ENST00000482614 NCAM1P13591 858 aa15.99■□□□□ 0.15
EXOSC3-205ENST00000482614 MPLP40238 635 aa15.99■□□□□ 0.15
EXOSC3-205ENST00000482614 P2RY2P41231 377 aa15.99■□□□□ 0.15
EXOSC3-205ENST00000482614 TBX4P57082 545 aa15.99■□□□□ 0.15
EXOSC3-205ENST00000482614 PTK2Q05397 1052 aa15.99■□□□□ 0.15
EXOSC3-205ENST00000482614 GEN1Q17RS7 908 aa15.99■□□□□ 0.15
EXOSC3-205ENST00000482614 PLA2G2CQ5R387 149 aa15.99■□□□□ 0.15
EXOSC3-205ENST00000482614 PMS2CLQ68D20 193 aa15.99■□□□□ 0.15
EXOSC3-205ENST00000482614 BEND5Q7L4P6 421 aa15.99■□□□□ 0.15
EXOSC3-205ENST00000482614 ANKS1BQ7Z6G8 1248 aa15.99■□□□□ 0.15
EXOSC3-205ENST00000482614 TMEM110Q86TL2 294 aa15.99■□□□□ 0.15
EXOSC3-205ENST00000482614 C12orf50Q8NA57 414 aaPredicted RBP15.99■□□□□ 0.15
EXOSC3-205ENST00000482614 IPO4Q8TEX9 1081 aaKnown RBP15.99■□□□□ 0.15
EXOSC3-205ENST00000482614 AZIN2Q96A70 460 aa15.99■□□□□ 0.15
EXOSC3-205ENST00000482614 FAM149B1Q96BN6 582 aa15.99■□□□□ 0.15
EXOSC3-205ENST00000482614 TMA16Q96EY4 203 aaKnown RBP15.99■□□□□ 0.15
EXOSC3-205ENST00000482614 PIWIL1Q96J94 861 aaKnown RBP15.99■□□□□ 0.15
EXOSC3-205ENST00000482614 ACOX2Q99424 681 aa15.99■□□□□ 0.15
EXOSC3-205ENST00000482614 GABRG3Q99928 467 aa15.99■□□□□ 0.15
EXOSC3-205ENST00000482614 RTKNQ9BST9 563 aa15.99■□□□□ 0.15
EXOSC3-205ENST00000482614 SIX2Q9NPC8 291 aa15.99■□□□□ 0.15
EXOSC3-205ENST00000482614 ACP6Q9NPH0 428 aa15.99■□□□□ 0.15
EXOSC3-205ENST00000482614 VPS45Q9NRW7 570 aa15.99■□□□□ 0.15
EXOSC3-205ENST00000482614 ABCA7Q8IZY2 2146 aa15.98■□□□□ 0.15
EXOSC3-205ENST00000482614 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.98■□□□□ 0.15
EXOSC3-205ENST00000482614 A0A1W2PQF6 199 aa15.98■□□□□ 0.15
EXOSC3-205ENST00000482614 KCNJ18B7U540 433 aa15.98■□□□□ 0.15
EXOSC3-205ENST00000482614 CAPN9O14815 690 aa15.98■□□□□ 0.15
EXOSC3-205ENST00000482614 MAP3K13O43283 966 aa15.98■□□□□ 0.15
EXOSC3-205ENST00000482614 TIMM44O43615 452 aa15.98■□□□□ 0.15
EXOSC3-205ENST00000482614 FYNP06241 537 aa15.98■□□□□ 0.15
EXOSC3-205ENST00000482614 GABRG2P18507 467 aa15.98■□□□□ 0.15
EXOSC3-205ENST00000482614 BCKDHBP21953 392 aa15.98■□□□□ 0.15
EXOSC3-205ENST00000482614 SLC11A2P49281 568 aa15.98■□□□□ 0.15
EXOSC3-205ENST00000482614 ATXN1P54253 815 aaKnown RBP15.98■□□□□ 0.15
EXOSC3-205ENST00000482614 CREB5Q02930 508 aa15.98■□□□□ 0.15
EXOSC3-205ENST00000482614 NNTQ13423 1086 aa15.98■□□□□ 0.15
EXOSC3-205ENST00000482614 KCNJ12Q14500 433 aa15.98■□□□□ 0.15
EXOSC3-205ENST00000482614 EIF4HQ15056 248 aaKnown RBP15.98■□□□□ 0.15
EXOSC3-205ENST00000482614 HSP90AA4PQ58FG1 418 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms