RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 MRPL41Q8IXM3 137 aaKnown RBP8.13□□□□□ -1.11
SNX13-208ENST00000482558 OR8H2Q8N162 312 aa8.13□□□□□ -1.11
SNX13-208ENST00000482558 ARFGAP2Q8N6H7 521 aa8.13□□□□□ -1.11
SNX13-208ENST00000482558 SHCBP1Q8NEM2 672 aa8.13□□□□□ -1.11
SNX13-208ENST00000482558 CCDC127Q96BQ5 260 aa8.13□□□□□ -1.11
SNX13-208ENST00000482558 MS4A14Q96JA4 679 aa8.13□□□□□ -1.11
SNX13-208ENST00000482558 TOX2Q96NM4 488 aa8.13□□□□□ -1.11
SNX13-208ENST00000482558 SPATC1LQ9H0A9 340 aa8.13□□□□□ -1.11
SNX13-208ENST00000482558 THAP2Q9H0W7 228 aa8.13□□□□□ -1.11
SNX13-208ENST00000482558 MROH8Q9H579 483 aa8.13□□□□□ -1.11
SNX13-208ENST00000482558 FAM124BQ9H5Z6 455 aaPredicted RBP8.13□□□□□ -1.11
SNX13-208ENST00000482558 MRPL47Q9HD33 250 aaKnown RBP8.13□□□□□ -1.11
SNX13-208ENST00000482558 GPRC5CQ9NQ84 441 aa8.13□□□□□ -1.11
SNX13-208ENST00000482558 XPNPEP1Q9NQW7 623 aa8.13□□□□□ -1.11
SNX13-208ENST00000482558 TJP2Q9UDY2 1190 aa8.13□□□□□ -1.11
SNX13-208ENST00000482558 PTPN22Q9Y2R2 807 aa8.13□□□□□ -1.11
SNX13-208ENST00000482558 ALG6Q9Y672 507 aa8.13□□□□□ -1.11
SNX13-208ENST00000482558 MYH9P35579 1960 aaKnown RBP8.13□□□□□ -1.11
SNX13-208ENST00000482558 COL11A1P12107 1806 aaPredicted RBP8.13□□□□□ -1.11
SNX13-208ENST00000482558 ARID2Q68CP9 1835 aa8.13□□□□□ -1.11
SNX13-208ENST00000482558 A0A0G2JMZ2 1700 aa8.12□□□□□ -1.11
SNX13-208ENST00000482558 KIAA1217Q5T5P2 1943 aa8.12□□□□□ -1.11
SNX13-208ENST00000482558 A6NCN8 305 aa8.12□□□□□ -1.11
SNX13-208ENST00000482558 ASB14A6NK59 587 aa8.12□□□□□ -1.11
SNX13-208ENST00000482558 RAD51CO43502 376 aa8.12□□□□□ -1.11
SNX13-208ENST00000482558 IL33O95760 270 aa8.12□□□□□ -1.11
SNX13-208ENST00000482558 FGGP02679 453 aa8.12□□□□□ -1.11
SNX13-208ENST00000482558 GLI1P08151 1106 aa8.12□□□□□ -1.11
SNX13-208ENST00000482558 FAM87AP0C7U9 286 aa8.12□□□□□ -1.11
SNX13-208ENST00000482558 ACRP10323 421 aa8.12□□□□□ -1.11
SNX13-208ENST00000482558 RAG1P15918 1043 aa8.12□□□□□ -1.11
SNX13-208ENST00000482558 CAPN2P17655 700 aa8.12□□□□□ -1.11
SNX13-208ENST00000482558 TNNI1P19237 187 aa8.12□□□□□ -1.11
SNX13-208ENST00000482558 ABCB4P21439 1286 aa8.12□□□□□ -1.11
SNX13-208ENST00000482558 CETN2P41208 172 aa8.12□□□□□ -1.11
SNX13-208ENST00000482558 LMAN1P49257 510 aa8.12□□□□□ -1.11
SNX13-208ENST00000482558 RWDD2BP57060 319 aa8.12□□□□□ -1.11
SNX13-208ENST00000482558 ERVK-21P61565 698 aa8.12□□□□□ -1.11
SNX13-208ENST00000482558 PPP2R2AP63151 447 aa8.12□□□□□ -1.11
SNX13-208ENST00000482558 GABREP78334 506 aa8.12□□□□□ -1.11
SNX13-208ENST00000482558 PTP4A2Q12974 167 aa8.12□□□□□ -1.11
SNX13-208ENST00000482558 KLF1Q13351 362 aaPredicted RBP8.12□□□□□ -1.11
SNX13-208ENST00000482558 TAF11Q15544 211 aa8.12□□□□□ -1.11
SNX13-208ENST00000482558 TARBP2Q15633 366 aaKnown RBP8.12□□□□□ -1.11
SNX13-208ENST00000482558 CLEC16AQ2KHT3 1053 aa8.12□□□□□ -1.11
SNX13-208ENST00000482558 ATP13A4Q4VNC1 1196 aa8.12□□□□□ -1.11
SNX13-208ENST00000482558 SLC23A3Q6PIS1 610 aa8.12□□□□□ -1.11
SNX13-208ENST00000482558 C1orf122Q6ZSJ8 110 aa8.12□□□□□ -1.11
SNX13-208ENST00000482558 CEP128Q6ZU80 1094 aa8.12□□□□□ -1.11
SNX13-208ENST00000482558 USP50Q70EL3 339 aaPredicted RBP8.12□□□□□ -1.11
SNX13-208ENST00000482558 OTOP3Q7RTS5 596 aa8.12□□□□□ -1.11
SNX13-208ENST00000482558 MCATQ8IVS2 390 aaKnown RBP8.12□□□□□ -1.11
SNX13-208ENST00000482558 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.12□□□□□ -1.11
SNX13-208ENST00000482558 CMTR2Q8IYT2 770 aaKnown RBP8.12□□□□□ -1.11
SNX13-208ENST00000482558 IQCKQ8N0W5 287 aa8.12□□□□□ -1.11
SNX13-208ENST00000482558 FAM181AQ8N9Y4 354 aa8.12□□□□□ -1.11
SNX13-208ENST00000482558 GSTCDQ8NEC7 633 aa8.12□□□□□ -1.11
SNX13-208ENST00000482558 OLIG1Q8TAK6 271 aa8.12□□□□□ -1.11
SNX13-208ENST00000482558 IFT81Q8WYA0 676 aa8.12□□□□□ -1.11
SNX13-208ENST00000482558 WNK4Q96J92 1243 aa8.12□□□□□ -1.11
SNX13-208ENST00000482558 KREMEN1Q96MU8 473 aa8.12□□□□□ -1.11
SNX13-208ENST00000482558 CGRRF1Q99675 332 aa8.12□□□□□ -1.11
SNX13-208ENST00000482558 DPH2Q9BQC3 489 aaPredicted RBP8.12□□□□□ -1.11
SNX13-208ENST00000482558 ZSWIM1Q9BR11 485 aa8.12□□□□□ -1.11
SNX13-208ENST00000482558 FAM213AQ9BRX8 229 aa8.12□□□□□ -1.11
SNX13-208ENST00000482558 FAM107BQ9H098 131 aa8.12□□□□□ -1.11
SNX13-208ENST00000482558 FAM204AQ9H8W3 233 aa8.12□□□□□ -1.11
SNX13-208ENST00000482558 PCYOX1Q9UHG3 505 aa8.12□□□□□ -1.11
SNX13-208ENST00000482558 AGTPBP1Q9UPW5 1226 aa8.12□□□□□ -1.11
SNX13-208ENST00000482558 CNTN6Q9UQ52 1028 aa8.12□□□□□ -1.11
SNX13-208ENST00000482558 PCDHA3Q9Y5H8 950 aa8.12□□□□□ -1.11
SNX13-208ENST00000482558 WDR81Q562E7 1941 aa8.11□□□□□ -1.11
SNX13-208ENST00000482558 TMEM265A0A087WTH1 108 aa8.11□□□□□ -1.11
SNX13-208ENST00000482558 A0A0B4J269 797 aa8.11□□□□□ -1.11
SNX13-208ENST00000482558 GOLGA8IPA6NC78 632 aa8.11□□□□□ -1.11
SNX13-208ENST00000482558 LRRIQ4A6NIV6 560 aa8.11□□□□□ -1.11
SNX13-208ENST00000482558 SLC22A31A6NKX4 558 aa8.11□□□□□ -1.11
SNX13-208ENST00000482558 GOLGA8JA6NMD2 632 aa8.11□□□□□ -1.11
SNX13-208ENST00000482558 CLDN3O15551 220 aa8.11□□□□□ -1.11
SNX13-208ENST00000482558 PRODHO43272 600 aa8.11□□□□□ -1.11
SNX13-208ENST00000482558 THAP12O43422 761 aa8.11□□□□□ -1.11
SNX13-208ENST00000482558 PHF2O75151 1096 aa8.11□□□□□ -1.11
SNX13-208ENST00000482558 TOM1L1O75674 476 aa8.11□□□□□ -1.11
SNX13-208ENST00000482558 SGPL1O95470 568 aa8.11□□□□□ -1.11
SNX13-208ENST00000482558 LSM8O95777 96 aaKnown RBP8.11□□□□□ -1.11
SNX13-208ENST00000482558 C4BPAP04003 597 aaKnown RBP8.11□□□□□ -1.11
SNX13-208ENST00000482558 DLATP10515 647 aaKnown RBP8.11□□□□□ -1.11
SNX13-208ENST00000482558 PABPC1P11940 636 aaKnown RBP8.11□□□□□ -1.11
SNX13-208ENST00000482558 CHRNB2P17787 502 aa8.11□□□□□ -1.11
SNX13-208ENST00000482558 UBA1P22314 1058 aaKnown RBP8.11□□□□□ -1.11
SNX13-208ENST00000482558 GLRA2P23416 452 aa8.11□□□□□ -1.11
SNX13-208ENST00000482558 CTNNA1P35221 906 aaKnown RBP8.11□□□□□ -1.11
SNX13-208ENST00000482558 PIK3CAP42336 1068 aa8.11□□□□□ -1.11
SNX13-208ENST00000482558 NSFP46459 744 aaKnown RBP8.11□□□□□ -1.11
SNX13-208ENST00000482558 FNTAP49354 379 aa8.11□□□□□ -1.11
SNX13-208ENST00000482558 CARSP49589 748 aaKnown RBP8.11□□□□□ -1.11
SNX13-208ENST00000482558 CCNA1P78396 465 aa8.11□□□□□ -1.11
SNX13-208ENST00000482558 DR1Q01658 176 aa8.11□□□□□ -1.11
SNX13-208ENST00000482558 FMO1Q01740 532 aa8.11□□□□□ -1.11
SNX13-208ENST00000482558 TAP1Q03518 808 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 148.5 ms