RNA–Protein interactions for RNA: ENST00000482541.2

CCNC-204, Transcript of cyclin C, humanhuman

TSL 1 (best) BASIC

Gene CCNC, Length 1,704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-204ENST00000482541 MDGA1Q8NFP4 955 aa8.13□□□□□ -1.11
CCNC-204ENST00000482541 LMO3Q8TAP4 145 aa8.13□□□□□ -1.11
CCNC-204ENST00000482541 NELFBQ8WX92 580 aa8.13□□□□□ -1.11
CCNC-204ENST00000482541 KCTD13Q8WZ19 329 aa8.13□□□□□ -1.11
CCNC-204ENST00000482541 NT5C1BQ96P26 610 aa8.13□□□□□ -1.11
CCNC-204ENST00000482541 BBS2Q9BXC9 721 aa8.13□□□□□ -1.11
CCNC-204ENST00000482541 DCLK3Q9C098 648 aa8.13□□□□□ -1.11
CCNC-204ENST00000482541 ARRDC1-AS1Q9H2J1 176 aa8.13□□□□□ -1.11
CCNC-204ENST00000482541 LRRC4Q9HBW1 653 aa8.13□□□□□ -1.11
CCNC-204ENST00000482541 OLA1Q9NTK5 396 aaKnown RBP8.13□□□□□ -1.11
CCNC-204ENST00000482541 FBXO10Q9UK96 956 aa8.13□□□□□ -1.11
CCNC-204ENST00000482541 TSPAN16Q9UKR8 245 aa8.13□□□□□ -1.11
CCNC-204ENST00000482541 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.12□□□□□ -1.11
CCNC-204ENST00000482541 NEDD8-MDP1E9PL57 170 aa8.12□□□□□ -1.11
CCNC-204ENST00000482541 SGK1O00141 431 aa8.12□□□□□ -1.11
CCNC-204ENST00000482541 SLC30A4O14863 429 aa8.12□□□□□ -1.11
CCNC-204ENST00000482541 ATP9BO43861 1147 aa8.12□□□□□ -1.11
CCNC-204ENST00000482541 GADD45BO75293 160 aaPredicted RBP8.12□□□□□ -1.11
CCNC-204ENST00000482541 KLKB1P03952 638 aa8.12□□□□□ -1.11
CCNC-204ENST00000482541 CD19P15391 556 aa8.12□□□□□ -1.11
CCNC-204ENST00000482541 LIMK1P53667 647 aa8.12□□□□□ -1.11
CCNC-204ENST00000482541 KDSRQ06136 332 aa8.12□□□□□ -1.11
CCNC-204ENST00000482541 PDE4CQ08493 712 aa8.12□□□□□ -1.11
CCNC-204ENST00000482541 LRMPQ12912 555 aa8.12□□□□□ -1.11
CCNC-204ENST00000482541 BYSLQ13895 437 aaKnown RBP8.12□□□□□ -1.11
CCNC-204ENST00000482541 STILQ15468 1287 aa8.12□□□□□ -1.11
CCNC-204ENST00000482541 CNGA2Q16280 664 aa8.12□□□□□ -1.11
CCNC-204ENST00000482541 PKDCCQ504Y2 493 aa8.12□□□□□ -1.11
CCNC-204ENST00000482541 C10orf76Q5T2E6 689 aa8.12□□□□□ -1.11
CCNC-204ENST00000482541 GRAMD4Q6IC98 578 aa8.12□□□□□ -1.11
CCNC-204ENST00000482541 TMEM270Q6UE05 265 aa8.12□□□□□ -1.11
CCNC-204ENST00000482541 LCLAT1Q6UWP7 414 aa8.12□□□□□ -1.11
CCNC-204ENST00000482541 TPGS1Q6ZTW0 290 aa8.12□□□□□ -1.11
CCNC-204ENST00000482541 RSRC2Q7L4I2 434 aaKnown RBP8.12□□□□□ -1.11
CCNC-204ENST00000482541 ZNF513Q8N8E2 541 aaPredicted RBP8.12□□□□□ -1.11
CCNC-204ENST00000482541 C12orf50Q8NA57 414 aaPredicted RBP8.12□□□□□ -1.11
CCNC-204ENST00000482541 OLIG1Q8TAK6 271 aa8.12□□□□□ -1.11
CCNC-204ENST00000482541 SLC35F5Q8WV83 523 aa8.12□□□□□ -1.11
CCNC-204ENST00000482541 DDX1Q92499 740 aaKnown RBP8.12□□□□□ -1.11
CCNC-204ENST00000482541 IPO9Q96P70 1041 aaKnown RBP8.12□□□□□ -1.11
CCNC-204ENST00000482541 CNGB3Q9NQW8 809 aa8.12□□□□□ -1.11
CCNC-204ENST00000482541 VPS45Q9NRW7 570 aa8.12□□□□□ -1.11
CCNC-204ENST00000482541 DNAJC17Q9NVM6 304 aaKnown RBP8.12□□□□□ -1.11
CCNC-204ENST00000482541 MARCH2Q9P0N8 246 aa8.12□□□□□ -1.11
CCNC-204ENST00000482541 STRIP2Q9ULQ0 834 aa8.12□□□□□ -1.11
CCNC-204ENST00000482541 FCF1Q9Y324 198 aaKnown RBP8.12□□□□□ -1.11
CCNC-204ENST00000482541 O00370 1275 aa8.12□□□□□ -1.11
CCNC-204ENST00000482541 MDM4O15151 490 aa8.12□□□□□ -1.11
CCNC-204ENST00000482541 ZBTB24O43167 697 aaPredicted RBP8.12□□□□□ -1.11
CCNC-204ENST00000482541 ADAM23O75077 832 aa8.12□□□□□ -1.11
CCNC-204ENST00000482541 CISD3P0C7P0 127 aa8.12□□□□□ -1.11
CCNC-204ENST00000482541 SETSIPP0DME0 302 aa8.12□□□□□ -1.11
CCNC-204ENST00000482541 NTSR1P30989 418 aa8.12□□□□□ -1.11
CCNC-204ENST00000482541 GBP1P32455 592 aa8.12□□□□□ -1.11
CCNC-204ENST00000482541 MPLP40238 635 aa8.12□□□□□ -1.11
CCNC-204ENST00000482541 P2RY2P41231 377 aa8.12□□□□□ -1.11
CCNC-204ENST00000482541 DGKGP49619 791 aa8.12□□□□□ -1.11
CCNC-204ENST00000482541 UBE2HP62256 183 aa8.12□□□□□ -1.11
CCNC-204ENST00000482541 GCNT1Q02742 428 aa8.12□□□□□ -1.11
CCNC-204ENST00000482541 EFEMP1Q12805 493 aa8.12□□□□□ -1.11
CCNC-204ENST00000482541 PAK1Q13153 545 aa8.12□□□□□ -1.11
CCNC-204ENST00000482541 E2F5Q15329 346 aa8.12□□□□□ -1.11
CCNC-204ENST00000482541 GOLGA7BQ2TAP0 167 aa8.12□□□□□ -1.11
CCNC-204ENST00000482541 SPDYCQ5MJ68 293 aa8.12□□□□□ -1.11
CCNC-204ENST00000482541 PMS2CLQ68D20 193 aa8.12□□□□□ -1.11
CCNC-204ENST00000482541 SDE2Q6IQ49 451 aa8.12□□□□□ -1.11
CCNC-204ENST00000482541 TRIM59Q8IWR1 403 aa8.12□□□□□ -1.11
CCNC-204ENST00000482541 PPM1KQ8N3J5 372 aa8.12□□□□□ -1.11
CCNC-204ENST00000482541 CPXM2Q8N436 756 aa8.12□□□□□ -1.11
CCNC-204ENST00000482541 EHBP1Q8NDI1 1231 aa8.12□□□□□ -1.11
CCNC-204ENST00000482541 ARHGAP9Q9BRR9 750 aa8.12□□□□□ -1.11
CCNC-204ENST00000482541 SRRTQ9BXP5 876 aaKnown RBP8.12□□□□□ -1.11
CCNC-204ENST00000482541 TPSD1Q9BZJ3 242 aa8.12□□□□□ -1.11
CCNC-204ENST00000482541 ABCC13Q9NSE7 274 aa8.12□□□□□ -1.11
CCNC-204ENST00000482541 RASAL2Q9UJF2 1139 aa8.12□□□□□ -1.11
CCNC-204ENST00000482541 SLC27A6Q9Y2P4 619 aa8.12□□□□□ -1.11
CCNC-204ENST00000482541 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.12□□□□□ -1.11
CCNC-204ENST00000482541 FRYLO94915 3013 aa8.12□□□□□ -1.11
CCNC-204ENST00000482541 SPAG17Q6Q759 2223 aa8.12□□□□□ -1.11
CCNC-204ENST00000482541 GPR179Q6PRD1 2367 aa8.11□□□□□ -1.11
CCNC-204ENST00000482541 SLC12A8A0AV02 714 aa8.11□□□□□ -1.11
CCNC-204ENST00000482541 BCLAF3A2AJT9 711 aaKnown RBP8.11□□□□□ -1.11
CCNC-204ENST00000482541 PRRT4C9JH25 899 aa8.11□□□□□ -1.11
CCNC-204ENST00000482541 RNF225M0QZC1 329 aaPredicted RBP8.11□□□□□ -1.11
CCNC-204ENST00000482541 TULP2O00295 520 aa8.11□□□□□ -1.11
CCNC-204ENST00000482541 GFRA2O00451 464 aa8.11□□□□□ -1.11
CCNC-204ENST00000482541 BIN1O00499 593 aa8.11□□□□□ -1.11
CCNC-204ENST00000482541 DCLK1O15075 740 aa8.11□□□□□ -1.11
CCNC-204ENST00000482541 NPC1O15118 1278 aa8.11□□□□□ -1.11
CCNC-204ENST00000482541 PENKP01210 267 aaPredicted RBP8.11□□□□□ -1.11
CCNC-204ENST00000482541 CYBBP04839 570 aa8.11□□□□□ -1.11
CCNC-204ENST00000482541 HNRNPLP14866 589 aaKnown RBP eCLIP8.11□□□□□ -1.114e-7■■■■□ 24
CCNC-204ENST00000482541 CORO1AP31146 461 aaKnown RBP8.11□□□□□ -1.11
CCNC-204ENST00000482541 ZNF132P52740 706 aa8.11□□□□□ -1.11
CCNC-204ENST00000482541 ZNF445P59923 1031 aa8.11□□□□□ -1.11
CCNC-204ENST00000482541 TRIP4Q15650 581 aaPredicted RBP8.11□□□□□ -1.11
CCNC-204ENST00000482541 AASDHQ4L235 1098 aaPredicted RBP8.11□□□□□ -1.11
CCNC-204ENST00000482541 BSPRYQ5W0U4 402 aa8.11□□□□□ -1.11
CCNC-204ENST00000482541 SIX6OS1Q8N1H7 587 aa8.11□□□□□ -1.11
CCNC-204ENST00000482541 UBA3Q8TBC4 463 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms