RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 COL4A3Q01955 1670 aa13.78□□□□□ -0.2
HDAC1-208ENST00000482310 DOCK4Q8N1I0 1966 aa13.78□□□□□ -0.2
HDAC1-208ENST00000482310 TMEM191CA6NGB0 347 aa13.77□□□□□ -0.21
HDAC1-208ENST00000482310 STC2O76061 302 aa13.77□□□□□ -0.21
HDAC1-208ENST00000482310 CORO1AP31146 461 aaKnown RBP13.77□□□□□ -0.21
HDAC1-208ENST00000482310 GBP1P32455 592 aa13.77□□□□□ -0.21
HDAC1-208ENST00000482310 GJC1P36383 396 aa13.77□□□□□ -0.21
HDAC1-208ENST00000482310 PLA2G5P39877 138 aa13.77□□□□□ -0.21
HDAC1-208ENST00000482310 ZP2Q05996 745 aa13.77□□□□□ -0.21
HDAC1-208ENST00000482310 USP4Q13107 963 aa13.77□□□□□ -0.21
HDAC1-208ENST00000482310 HTR4Q13639 388 aa13.77□□□□□ -0.21
HDAC1-208ENST00000482310 MESDQ14696 234 aa13.77□□□□□ -0.21
HDAC1-208ENST00000482310 TRIP4Q15650 581 aaPredicted RBP13.77□□□□□ -0.21
HDAC1-208ENST00000482310 ZNF77Q15935 545 aa13.77□□□□□ -0.21
HDAC1-208ENST00000482310 SLC25A52Q3SY17 297 aa13.77□□□□□ -0.21
HDAC1-208ENST00000482310 TRIM68Q6AZZ1 485 aa13.77□□□□□ -0.21
HDAC1-208ENST00000482310 SCYL2Q6P3W7 929 aa13.77□□□□□ -0.21
HDAC1-208ENST00000482310 MTSS1LQ765P7 747 aa13.77□□□□□ -0.21
HDAC1-208ENST00000482310 SND1Q7KZF4 910 aaKnown RBP eCLIP13.77□□□□□ -0.21
HDAC1-208ENST00000482310 FAM131BQ86XD5 332 aa13.77□□□□□ -0.21
HDAC1-208ENST00000482310 CPNE8Q86YQ8 564 aa13.77□□□□□ -0.21
HDAC1-208ENST00000482310 DENND1CQ8IV53 801 aa13.77□□□□□ -0.21
HDAC1-208ENST00000482310 ADHFE1Q8IWW8 467 aa13.77□□□□□ -0.21
HDAC1-208ENST00000482310 YAF2Q8IY57 180 aa13.77□□□□□ -0.21
HDAC1-208ENST00000482310 CELF5Q8N6W0 485 aaKnown RBP13.77□□□□□ -0.21
HDAC1-208ENST00000482310 RFFLQ8WZ73 363 aa13.77□□□□□ -0.21
HDAC1-208ENST00000482310 LACRTQ9GZZ8 138 aa13.77□□□□□ -0.21
HDAC1-208ENST00000482310 C11orf16Q9NQ32 467 aa13.77□□□□□ -0.21
HDAC1-208ENST00000482310 TMPRSS4Q9NRS4 437 aa13.77□□□□□ -0.21
HDAC1-208ENST00000482310 PIGVQ9NUD9 493 aa13.77□□□□□ -0.21
HDAC1-208ENST00000482310 ZMYM5Q9UJ78 669 aa13.77□□□□□ -0.21
HDAC1-208ENST00000482310 LSM7Q9UK45 103 aaKnown RBP13.77□□□□□ -0.21
HDAC1-208ENST00000482310 ADGRG1Q9Y653 693 aa13.77□□□□□ -0.21
HDAC1-208ENST00000482310 WNT6Q9Y6F9 365 aa13.77□□□□□ -0.21
HDAC1-208ENST00000482310 ZFP37Q9Y6Q3 630 aaPredicted RBP13.77□□□□□ -0.21
HDAC1-208ENST00000482310 DUSP10Q9Y6W6 482 aa13.77□□□□□ -0.21
HDAC1-208ENST00000482310 COL4A2P08572 1712 aa13.76□□□□□ -0.21
HDAC1-208ENST00000482310 MACROD2A1Z1Q3 448 aa13.76□□□□□ -0.21
HDAC1-208ENST00000482310 TRDMT1O14717 391 aaKnown RBP13.76□□□□□ -0.21
HDAC1-208ENST00000482310 CCDC175P0C221 793 aa13.76□□□□□ -0.21
HDAC1-208ENST00000482310 TNNT1P13805 278 aa13.76□□□□□ -0.21
HDAC1-208ENST00000482310 DESP17661 470 aa13.76□□□□□ -0.21
HDAC1-208ENST00000482310 PFKLP17858 780 aa13.76□□□□□ -0.21
HDAC1-208ENST00000482310 RDXP35241 583 aaKnown RBP13.76□□□□□ -0.21
HDAC1-208ENST00000482310 GGCXP38435 758 aa13.76□□□□□ -0.21
HDAC1-208ENST00000482310 ZNF143P52747 638 aaPredicted RBP13.76□□□□□ -0.21
HDAC1-208ENST00000482310 VCPP55072 806 aaKnown RBP13.76□□□□□ -0.21
HDAC1-208ENST00000482310 COG7P83436 770 aa13.76□□□□□ -0.21
HDAC1-208ENST00000482310 CC2D1AQ6P1N0 951 aaPredicted RBP13.76□□□□□ -0.21
HDAC1-208ENST00000482310 KLHDC10Q6PID8 442 aa13.76□□□□□ -0.21
HDAC1-208ENST00000482310 PLCD3Q8N3E9 789 aa13.76□□□□□ -0.21
HDAC1-208ENST00000482310 ZNF276Q8N554 614 aa13.76□□□□□ -0.21
HDAC1-208ENST00000482310 TTC8Q8TAM2 541 aa13.76□□□□□ -0.21
HDAC1-208ENST00000482310 BPIFB1Q8TDL5 484 aa13.76□□□□□ -0.21
HDAC1-208ENST00000482310 BHMTQ93088 406 aa13.76□□□□□ -0.21
HDAC1-208ENST00000482310 ELSPBP1Q96BH3 223 aa13.76□□□□□ -0.21
HDAC1-208ENST00000482310 PLD4Q96BZ4 506 aa13.76□□□□□ -0.21
HDAC1-208ENST00000482310 FCRL2Q96LA5 508 aaPredicted RBP13.76□□□□□ -0.21
HDAC1-208ENST00000482310 GOLPH3Q9H4A6 298 aa13.76□□□□□ -0.21
HDAC1-208ENST00000482310 KIF9Q9HAQ2 790 aa13.76□□□□□ -0.21
HDAC1-208ENST00000482310 UVRAGQ9P2Y5 699 aa13.76□□□□□ -0.21
HDAC1-208ENST00000482310 XPO7Q9UIA9 1087 aaKnown RBP13.76□□□□□ -0.21
HDAC1-208ENST00000482310 INTUQ9ULD6 942 aa13.76□□□□□ -0.21
HDAC1-208ENST00000482310 TLR6Q9Y2C9 796 aa13.76□□□□□ -0.21
HDAC1-208ENST00000482310 HBS1LQ9Y450 684 aaKnown RBP13.76□□□□□ -0.21
HDAC1-208ENST00000482310 HYOU1Q9Y4L1 999 aa13.76□□□□□ -0.21
HDAC1-208ENST00000482310 PAXBP1Q9Y5B6 917 aa13.76□□□□□ -0.21
HDAC1-208ENST00000482310 SNX10Q9Y5X0 201 aa13.76□□□□□ -0.21
HDAC1-208ENST00000482310 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.76□□□□□ -0.21
HDAC1-208ENST00000482310 KIAA1549LQ6ZVL6 1849 aa13.76□□□□□ -0.21
HDAC1-208ENST00000482310 LOC730098B7Z3J9 87 aa13.75□□□□□ -0.21
HDAC1-208ENST00000482310 MYO1FO00160 1098 aa13.75□□□□□ -0.21
HDAC1-208ENST00000482310 MOCS3O95396 460 aa13.75□□□□□ -0.21
HDAC1-208ENST00000482310 IGLV3-25P01717 112 aa13.75□□□□□ -0.21
HDAC1-208ENST00000482310 APOEP02649 317 aa13.75□□□□□ -0.21
HDAC1-208ENST00000482310 GDI1P31150 447 aa13.75□□□□□ -0.21
HDAC1-208ENST00000482310 PTPN9P43378 593 aa13.75□□□□□ -0.21
HDAC1-208ENST00000482310 IFNAR2P48551 515 aa13.75□□□□□ -0.21
HDAC1-208ENST00000482310 HARS2P49590 506 aaKnown RBP13.75□□□□□ -0.21
HDAC1-208ENST00000482310 KIF5AQ12840 1032 aa13.75□□□□□ -0.21
HDAC1-208ENST00000482310 BEND5Q7L4P6 421 aa13.75□□□□□ -0.21
HDAC1-208ENST00000482310 DDX42Q86XP3 938 aaKnown RBP eCLIP13.75□□□□□ -0.21
HDAC1-208ENST00000482310 BBS7Q8IWZ6 715 aa13.75□□□□□ -0.21
HDAC1-208ENST00000482310 RHOT2Q8IXI1 618 aa13.75□□□□□ -0.21
HDAC1-208ENST00000482310 ZDHHC14Q8IZN3 488 aa13.75□□□□□ -0.21
HDAC1-208ENST00000482310 CCDC185Q8N715 623 aa13.75□□□□□ -0.21
HDAC1-208ENST00000482310 ASIC4Q96FT7 647 aa13.75□□□□□ -0.21
HDAC1-208ENST00000482310 CNPY3Q9BT09 278 aa13.75□□□□□ -0.21
HDAC1-208ENST00000482310 LRFN3Q9BTN0 628 aa13.75□□□□□ -0.21
HDAC1-208ENST00000482310 KCNK12Q9HB15 430 aa13.75□□□□□ -0.21
HDAC1-208ENST00000482310 LZTFL1Q9NQ48 299 aa13.75□□□□□ -0.21
HDAC1-208ENST00000482310 RRN3Q9NYV6 651 aa13.75□□□□□ -0.21
HDAC1-208ENST00000482310 PCSK1NQ9UHG2 260 aa13.75□□□□□ -0.21
HDAC1-208ENST00000482310 IP6K2Q9UHH9 426 aa13.75□□□□□ -0.21
HDAC1-208ENST00000482310 SALL4Q9UJQ4 1053 aa13.75□□□□□ -0.21
HDAC1-208ENST00000482310 PYCARDQ9ULZ3 195 aa13.75□□□□□ -0.21
HDAC1-208ENST00000482310 PPP2R2CQ9Y2T4 447 aa13.75□□□□□ -0.21
HDAC1-208ENST00000482310 ATG2BQ96BY7 2078 aa13.75□□□□□ -0.21
HDAC1-208ENST00000482310 TRIOO75962 3097 aa13.74□□□□□ -0.21
HDAC1-208ENST00000482310 GOLGA6L7A0A1B0GV03 622 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms