RNA–Protein interactions for RNA: ENST00000482280.1

MSH5-215, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 944 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-215ENST00000482280 NPC1O15118 1278 aa20.76■□□□□ 0.91
MSH5-215ENST00000482280 ADAM23O75077 832 aa20.76■□□□□ 0.91
MSH5-215ENST00000482280 LATS1O95835 1130 aa20.76■□□□□ 0.91
MSH5-215ENST00000482280 PENKP01210 267 aaPredicted RBP20.76■□□□□ 0.91
MSH5-215ENST00000482280 ZNF806P0C7X5 589 aa20.76■□□□□ 0.91
MSH5-215ENST00000482280 NCAM1P13591 858 aa20.76■□□□□ 0.91
MSH5-215ENST00000482280 ERCC5P28715 1186 aaPredicted RBP20.76■□□□□ 0.91
MSH5-215ENST00000482280 MAN2A1Q16706 1144 aa20.76■□□□□ 0.91
MSH5-215ENST00000482280 EGFLAMQ63HQ2 1017 aa20.76■□□□□ 0.91
MSH5-215ENST00000482280 NUGGCQ68CJ6 796 aa20.76■□□□□ 0.91
MSH5-215ENST00000482280 TOGARAM2Q6ZUX3 1019 aa20.76■□□□□ 0.91
MSH5-215ENST00000482280 LPCAT2Q7L5N7 544 aa20.76■□□□□ 0.91
MSH5-215ENST00000482280 ANKS1BQ7Z6G8 1248 aa20.76■□□□□ 0.91
MSH5-215ENST00000482280 SLC2A11Q9BYW1 496 aa20.76■□□□□ 0.91
MSH5-215ENST00000482280 CNTN6Q9UQ52 1028 aa20.76■□□□□ 0.91
MSH5-215ENST00000482280 SLC27A6Q9Y2P4 619 aa20.76■□□□□ 0.91
MSH5-215ENST00000482280 CALCAP01258 141 aa20.75■□□□□ 0.91
MSH5-215ENST00000482280 SLC9A1P19634 815 aa20.75■□□□□ 0.91
MSH5-215ENST00000482280 DHPSP49366 369 aaPredicted RBP20.75■□□□□ 0.91
MSH5-215ENST00000482280 SNX16P57768 344 aa20.75■□□□□ 0.91
MSH5-215ENST00000482280 CCDC6Q16204 474 aa20.75■□□□□ 0.91
MSH5-215ENST00000482280 MEA1Q16626 185 aa20.75■□□□□ 0.91
MSH5-215ENST00000482280 DPCR1Q3MIW9 517 aa20.75■□□□□ 0.91
MSH5-215ENST00000482280 ADGRF1Q5T601 910 aa20.75■□□□□ 0.91
MSH5-215ENST00000482280 FYB2Q5VWT5 728 aa20.75■□□□□ 0.91
MSH5-215ENST00000482280 IL31Q6EBC2 164 aa20.75■□□□□ 0.91
MSH5-215ENST00000482280 BHLHA9Q7RTU4 235 aa20.75■□□□□ 0.91
MSH5-215ENST00000482280 CYP2U1Q7Z449 544 aa20.75■□□□□ 0.91
MSH5-215ENST00000482280 CCDC117Q8IWD4 279 aaPredicted RBP20.75■□□□□ 0.91
MSH5-215ENST00000482280 NOX5Q96PH1 765 aa20.75■□□□□ 0.91
MSH5-215ENST00000482280 DDX50Q9BQ39 737 aaKnown RBP20.75■□□□□ 0.91
MSH5-215ENST00000482280 ZSWIM1Q9BR11 485 aa20.75■□□□□ 0.91
MSH5-215ENST00000482280 PRRT4C9JH25 899 aa20.74■□□□□ 0.91
MSH5-215ENST00000482280 GFRA2O00451 464 aa20.74■□□□□ 0.91
MSH5-215ENST00000482280 MSI1O43347 362 aaKnown RBP20.74■□□□□ 0.91
MSH5-215ENST00000482280 SYNCRIPO60506 623 aaKnown RBP20.74■□□□□ 0.91
MSH5-215ENST00000482280 TSPAN3O60637 253 aa20.74■□□□□ 0.91
MSH5-215ENST00000482280 CAVIN2O95810 425 aa20.74■□□□□ 0.91
MSH5-215ENST00000482280 TPM2P07951 284 aa20.74■□□□□ 0.91
MSH5-215ENST00000482280 TBX4P57082 545 aa20.74■□□□□ 0.91
MSH5-215ENST00000482280 PTK2Q05397 1052 aa20.74■□□□□ 0.91
MSH5-215ENST00000482280 EIF4HQ15056 248 aaKnown RBP20.74■□□□□ 0.91
MSH5-215ENST00000482280 PMS2CLQ68D20 193 aa20.74■□□□□ 0.91
MSH5-215ENST00000482280 MSANTD2Q6P1R3 559 aa20.74■□□□□ 0.91
MSH5-215ENST00000482280 SCUBE3Q8IX30 993 aa20.74■□□□□ 0.91
MSH5-215ENST00000482280 STK32AQ8WU08 396 aa20.74■□□□□ 0.91
MSH5-215ENST00000482280 ZNF606Q8WXB4 792 aa20.74■□□□□ 0.91
MSH5-215ENST00000482280 RLN3Q8WXF3 142 aa20.74■□□□□ 0.91
MSH5-215ENST00000482280 TMA16Q96EY4 203 aaKnown RBP20.74■□□□□ 0.91
MSH5-215ENST00000482280 SERPINB11Q96P15 392 aa20.74■□□□□ 0.91
MSH5-215ENST00000482280 MED15Q96RN5 788 aa20.74■□□□□ 0.91
MSH5-215ENST00000482280 CIPCQ9C0C6 399 aa20.74■□□□□ 0.91
MSH5-215ENST00000482280 CEP83Q9Y592 693 aa20.74■□□□□ 0.91
MSH5-215ENST00000482280 GPR179Q6PRD1 2367 aa20.74■□□□□ 0.91
MSH5-215ENST00000482280 KIAA1549LQ6ZVL6 1849 aa20.74■□□□□ 0.91
MSH5-215ENST00000482280 TIMM44O43615 452 aa20.73■□□□□ 0.91
MSH5-215ENST00000482280 ZNF217O75362 1048 aa20.73■□□□□ 0.91
MSH5-215ENST00000482280 CISD3P0C7P0 127 aa20.73■□□□□ 0.91
MSH5-215ENST00000482280 HNRNPLP14866 589 aaKnown RBP eCLIP20.73■□□□□ 0.914e-7■■■■□ 21.7
MSH5-215ENST00000482280 P2RY2P41231 377 aa20.73■□□□□ 0.91
MSH5-215ENST00000482280 GPD2P43304 727 aa20.73■□□□□ 0.91
MSH5-215ENST00000482280 ATXN1P54253 815 aaKnown RBP20.73■□□□□ 0.91
MSH5-215ENST00000482280 SF3A2Q15428 464 aaKnown RBP20.73■□□□□ 0.91
MSH5-215ENST00000482280 VWA3BQ502W6 1294 aa20.73■□□□□ 0.91
MSH5-215ENST00000482280 CT47A1Q5JQC4 288 aaPredicted RBP20.73■□□□□ 0.91
MSH5-215ENST00000482280 DENND1BQ6P3S1 775 aa20.73■□□□□ 0.91
MSH5-215ENST00000482280 GJB7Q6PEY0 223 aa20.73■□□□□ 0.91
MSH5-215ENST00000482280 SLC36A4Q6YBV0 504 aa20.73■□□□□ 0.91
MSH5-215ENST00000482280 ZNF557Q8N988 423 aaPredicted RBP20.73■□□□□ 0.91
MSH5-215ENST00000482280 IPO4Q8TEX9 1081 aaKnown RBP20.73■□□□□ 0.91
MSH5-215ENST00000482280 CLEC4CQ8WTT0 213 aa20.73■□□□□ 0.91
MSH5-215ENST00000482280 TUBGCP2Q9BSJ2 902 aa20.73■□□□□ 0.91
MSH5-215ENST00000482280 PDCL3Q9H2J4 239 aa20.73■□□□□ 0.91
MSH5-215ENST00000482280 NDST4Q9H3R1 872 aa20.73■□□□□ 0.91
MSH5-215ENST00000482280 CACNA2D2Q9NY47 1150 aa20.73■□□□□ 0.91
MSH5-215ENST00000482280 FBXO10Q9UK96 956 aa20.73■□□□□ 0.91
MSH5-215ENST00000482280 AP5Z1O43299 807 aa20.72■□□□□ 0.91
MSH5-215ENST00000482280 PON1P27169 355 aa20.72■□□□□ 0.91
MSH5-215ENST00000482280 KRT9P35527 623 aa20.72■□□□□ 0.91
MSH5-215ENST00000482280 DPP6P42658 865 aa20.72■□□□□ 0.91
MSH5-215ENST00000482280 SMYD5Q6GMV2 418 aa20.72■□□□□ 0.91
MSH5-215ENST00000482280 FAM217AQ8IXS0 508 aa20.72■□□□□ 0.91
MSH5-215ENST00000482280 OLIG1Q8TAK6 271 aa20.72■□□□□ 0.91
MSH5-215ENST00000482280 DDX1Q92499 740 aaKnown RBP20.72■□□□□ 0.91
MSH5-215ENST00000482280 ACOX2Q99424 681 aa20.72■□□□□ 0.91
MSH5-215ENST00000482280 GABRG3Q99928 467 aa20.72■□□□□ 0.91
MSH5-215ENST00000482280 SYNCQ9H7C4 482 aa20.72■□□□□ 0.91
MSH5-215ENST00000482280 STON1Q9Y6Q2 735 aa20.72■□□□□ 0.91
MSH5-215ENST00000482280 ZNF292O60281 2723 aa20.71■□□□□ 0.91
MSH5-215ENST00000482280 MYOFQ9NZM1 2061 aa20.71■□□□□ 0.91
MSH5-215ENST00000482280 BCLAF3A2AJT9 711 aaKnown RBP20.71■□□□□ 0.91
MSH5-215ENST00000482280 SLC30A4O14863 429 aa20.71■□□□□ 0.91
MSH5-215ENST00000482280 KHNYNO15037 678 aaKnown RBP20.71■□□□□ 0.91
MSH5-215ENST00000482280 IRAK2O43187 625 aa20.71■□□□□ 0.91
MSH5-215ENST00000482280 APOEP02649 317 aa20.71■□□□□ 0.91
MSH5-215ENST00000482280 GABRG2P18507 467 aa20.71■□□□□ 0.91
MSH5-215ENST00000482280 BCKDHBP21953 392 aa20.71■□□□□ 0.91
MSH5-215ENST00000482280 BPIFB4P59827 614 aa20.71■□□□□ 0.91
MSH5-215ENST00000482280 RING1Q06587 406 aa20.71■□□□□ 0.91
MSH5-215ENST00000482280 GEN1Q17RS7 908 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms