RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 SLC39A10Q9ULF5 831 aa4.43□□□□□ -1.7
VPS41-212ENST00000482217 ZFR2Q9UPR6 939 aaKnown RBP4.43□□□□□ -1.7
VPS41-212ENST00000482217 EXOC7Q9UPT5 735 aa4.43□□□□□ -1.7
VPS41-212ENST00000482217 CLCA2Q9UQC9 943 aa4.43□□□□□ -1.7
VPS41-212ENST00000482217 NOSIPQ9Y314 301 aaKnown RBP4.43□□□□□ -1.7
VPS41-212ENST00000482217 NR2E3Q9Y5X4 410 aa4.43□□□□□ -1.7
VPS41-212ENST00000482217 ACTL7AQ9Y615 435 aa4.43□□□□□ -1.7
VPS41-212ENST00000482217 AP1M2Q9Y6Q5 423 aa4.43□□□□□ -1.7
VPS41-212ENST00000482217 PIAS3Q9Y6X2 628 aa4.43□□□□□ -1.7
VPS41-212ENST00000482217 LMTK3Q96Q04 1460 aa4.43□□□□□ -1.7
VPS41-212ENST00000482217 A0A1W2PPC4 97 aa4.42□□□□□ -1.7
VPS41-212ENST00000482217 CXorf49A8MYA2 514 aaPredicted RBP4.42□□□□□ -1.7
VPS41-212ENST00000482217 PROM1O43490 865 aa4.42□□□□□ -1.7
VPS41-212ENST00000482217 PRPSAP2O60256 369 aa4.42□□□□□ -1.7
VPS41-212ENST00000482217 TBX10O75333 385 aa4.42□□□□□ -1.7
VPS41-212ENST00000482217 SEC22BO75396 215 aa4.42□□□□□ -1.7
VPS41-212ENST00000482217 MTRF1O75570 445 aaKnown RBP4.42□□□□□ -1.7
VPS41-212ENST00000482217 PIAS2O75928 621 aa4.42□□□□□ -1.7
VPS41-212ENST00000482217 IPO13O94829 963 aaKnown RBP4.42□□□□□ -1.7
VPS41-212ENST00000482217 EPN2O95208 641 aa4.42□□□□□ -1.7
VPS41-212ENST00000482217 ADCY5O95622 1261 aa4.42□□□□□ -1.7
VPS41-212ENST00000482217 HEXBP07686 556 aa4.42□□□□□ -1.7
VPS41-212ENST00000482217 RAP2AP10114 183 aa4.42□□□□□ -1.7
VPS41-212ENST00000482217 TYRP14679 529 aa4.42□□□□□ -1.7
VPS41-212ENST00000482217 ATP5JP18859 108 aa4.42□□□□□ -1.7
VPS41-212ENST00000482217 GNAT2P19087 354 aa4.42□□□□□ -1.7
VPS41-212ENST00000482217 FPR1P21462 350 aa4.42□□□□□ -1.7
VPS41-212ENST00000482217 CD9P21926 228 aa4.42□□□□□ -1.7
VPS41-212ENST00000482217 MLH1P40692 756 aa4.42□□□□□ -1.7
VPS41-212ENST00000482217 MAGEA10P43363 369 aaPredicted RBP4.42□□□□□ -1.7
VPS41-212ENST00000482217 ASMTP46597 345 aa4.42□□□□□ -1.7
VPS41-212ENST00000482217 ALDH1A3P47895 512 aa4.42□□□□□ -1.7
VPS41-212ENST00000482217 CCT4P50991 539 aaKnown RBP4.42□□□□□ -1.7
VPS41-212ENST00000482217 CCR9P51686 369 aa4.42□□□□□ -1.7
VPS41-212ENST00000482217 NKX6-1P78426 367 aaPredicted RBP4.42□□□□□ -1.7
VPS41-212ENST00000482217 MC1RQ01726 317 aa4.42□□□□□ -1.7
VPS41-212ENST00000482217 PLS1Q14651 629 aa4.42□□□□□ -1.7
VPS41-212ENST00000482217 PPP1R7Q15435 360 aa4.42□□□□□ -1.7
VPS41-212ENST00000482217 BMT2Q1RMZ1 405 aa4.42□□□□□ -1.7
VPS41-212ENST00000482217 ODF2Q5BJF6 829 aa4.42□□□□□ -1.7
VPS41-212ENST00000482217 KRBOX4Q5JUW0 171 aa4.42□□□□□ -1.7
VPS41-212ENST00000482217 LCE5AQ5TCM9 118 aa4.42□□□□□ -1.7
VPS41-212ENST00000482217 AFMIDQ63HM1 303 aa4.42□□□□□ -1.7
VPS41-212ENST00000482217 TPGS2Q68CL5 300 aa4.42□□□□□ -1.7
VPS41-212ENST00000482217 TCTN3Q6NUS6 607 aa4.42□□□□□ -1.7
VPS41-212ENST00000482217 KCNV1Q6PIU1 500 aa4.42□□□□□ -1.7
VPS41-212ENST00000482217 ISLR2Q6UXK2 745 aa4.42□□□□□ -1.7
VPS41-212ENST00000482217 HEATR3Q7Z4Q2 680 aa4.42□□□□□ -1.7
VPS41-212ENST00000482217 R3HCC1LQ7Z5L2 792 aaKnown RBP4.42□□□□□ -1.7
VPS41-212ENST00000482217 POLNQ7Z5Q5 900 aa4.42□□□□□ -1.7
VPS41-212ENST00000482217 GPR149Q86SP6 731 aa4.42□□□□□ -1.7
VPS41-212ENST00000482217 GLRX5Q86SX6 157 aa4.42□□□□□ -1.7
VPS41-212ENST00000482217 SESTD1Q86VW0 696 aa4.42□□□□□ -1.7
VPS41-212ENST00000482217 DZIP1Q86YF9 867 aaKnown RBP4.42□□□□□ -1.7
VPS41-212ENST00000482217 USP38Q8NB14 1042 aa4.42□□□□□ -1.7
VPS41-212ENST00000482217 CCDC148Q8NFR7 591 aa4.42□□□□□ -1.7
VPS41-212ENST00000482217 OR6C4Q8NGE1 309 aa4.42□□□□□ -1.7
VPS41-212ENST00000482217 SPPL3Q8TCT6 385 aa4.42□□□□□ -1.7
VPS41-212ENST00000482217 PIGOQ8TEQ8 1089 aa4.42□□□□□ -1.7
VPS41-212ENST00000482217 CTNNBL1Q8WYA6 563 aaPredicted RBP4.42□□□□□ -1.7
VPS41-212ENST00000482217 RAB24Q969Q5 203 aa4.42□□□□□ -1.7
VPS41-212ENST00000482217 ZNF566Q969W8 418 aa4.42□□□□□ -1.7
VPS41-212ENST00000482217 LRRC59Q96AG4 307 aaKnown RBP4.42□□□□□ -1.7
VPS41-212ENST00000482217 CFAP36Q96G28 342 aa4.42□□□□□ -1.7
VPS41-212ENST00000482217 CEP295NLQ96MC4 621 aa4.42□□□□□ -1.7
VPS41-212ENST00000482217 GNRHR2Q96P88 292 aa4.42□□□□□ -1.7
VPS41-212ENST00000482217 OR14A2Q96R54 314 aa4.42□□□□□ -1.7
VPS41-212ENST00000482217 ATP6V0BQ99437 205 aa4.42□□□□□ -1.7
VPS41-212ENST00000482217 VRK1Q99986 396 aaPredicted RBP4.42□□□□□ -1.7
VPS41-212ENST00000482217 KRTAP9-3Q9BYQ3 159 aa4.42□□□□□ -1.7
VPS41-212ENST00000482217 USP44Q9H0E7 712 aa4.42□□□□□ -1.7
VPS41-212ENST00000482217 ZCWPW1Q9H0M4 648 aa4.42□□□□□ -1.7
VPS41-212ENST00000482217 C11orf54Q9H0W9 315 aaPredicted RBP4.42□□□□□ -1.7
VPS41-212ENST00000482217 THAP9Q9H5L6 903 aa4.42□□□□□ -1.7
VPS41-212ENST00000482217 ZMAT3Q9HA38 289 aaKnown RBP4.42□□□□□ -1.7
VPS41-212ENST00000482217 HOMER3Q9NSC5 361 aa4.42□□□□□ -1.7
VPS41-212ENST00000482217 LMBRD1Q9NUN5 540 aa4.42□□□□□ -1.7
VPS41-212ENST00000482217 SEPT11Q9NVA2 429 aaKnown RBP4.42□□□□□ -1.7
VPS41-212ENST00000482217 PNPOQ9NVS9 261 aa4.42□□□□□ -1.7
VPS41-212ENST00000482217 SMPD4Q9NXE4 827 aa4.42□□□□□ -1.7
VPS41-212ENST00000482217 SIDT1Q9NXL6 827 aaKnown RBP4.42□□□□□ -1.7
VPS41-212ENST00000482217 IGSF9Q9P2J2 1179 aa4.42□□□□□ -1.7
VPS41-212ENST00000482217 CEP83Q9Y592 693 aa4.42□□□□□ -1.7
VPS41-212ENST00000482217 PCDHA3Q9Y5H8 950 aa4.42□□□□□ -1.7
VPS41-212ENST00000482217 CENPJQ9HC77 1338 aaPredicted RBP4.42□□□□□ -1.7
VPS41-212ENST00000482217 NSD2O96028 1365 aa4.41□□□□□ -1.7
VPS41-212ENST00000482217 A0A0U1RQK1 487 aa4.41□□□□□ -1.7
VPS41-212ENST00000482217 ZNF320A2RRD8 509 aa4.41□□□□□ -1.7
VPS41-212ENST00000482217 TBKBP1A7MCY6 615 aa4.41□□□□□ -1.7
VPS41-212ENST00000482217 H0YAE9 185 aa4.41□□□□□ -1.7
VPS41-212ENST00000482217 WNT10BO00744 389 aa4.41□□□□□ -1.7
VPS41-212ENST00000482217 SH2B2O14492 632 aaPredicted RBP4.41□□□□□ -1.7
VPS41-212ENST00000482217 ASAP2O43150 1006 aa4.41□□□□□ -1.7
VPS41-212ENST00000482217 ADAM20O43506 726 aa4.41□□□□□ -1.7
VPS41-212ENST00000482217 SYNCRIPO60506 623 aaKnown RBP4.41□□□□□ -1.7
VPS41-212ENST00000482217 MFAP3LO75121 409 aa4.41□□□□□ -1.7
VPS41-212ENST00000482217 PPFIA2O75334 1257 aa4.41□□□□□ -1.7
VPS41-212ENST00000482217 PALMO75781 387 aa4.41□□□□□ -1.7
VPS41-212ENST00000482217 STC2O76061 302 aa4.41□□□□□ -1.7
VPS41-212ENST00000482217 FGFR1OPO95684 399 aaKnown RBP4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms