RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 TSPAN3O60637 253 aa15.73■□□□□ 0.11
HDAC6-224ENST00000481929 BMP15O95972 392 aa15.73■□□□□ 0.11
HDAC6-224ENST00000481929 ITGAVP06756 1048 aa15.73■□□□□ 0.11
HDAC6-224ENST00000481929 DLATP10515 647 aaKnown RBP15.73■□□□□ 0.11
HDAC6-224ENST00000481929 IDEP14735 1019 aa15.73■□□□□ 0.11
HDAC6-224ENST00000481929 TNNI1P19237 187 aa15.73■□□□□ 0.11
HDAC6-224ENST00000481929 ABCB4P21439 1286 aa15.73■□□□□ 0.11
HDAC6-224ENST00000481929 PLA2G4AP47712 749 aa15.73■□□□□ 0.11
HDAC6-224ENST00000481929 ARID5AQ03989 594 aa15.73■□□□□ 0.11
HDAC6-224ENST00000481929 TRPC3Q13507 836 aa15.73■□□□□ 0.11
HDAC6-224ENST00000481929 TBC1D25Q3MII6 688 aa15.73■□□□□ 0.11
HDAC6-224ENST00000481929 FYB2Q5VWT5 728 aa15.73■□□□□ 0.11
HDAC6-224ENST00000481929 FAM181AQ8N9Y4 354 aa15.73■□□□□ 0.11
HDAC6-224ENST00000481929 P2RY11Q96G91 374 aa15.73■□□□□ 0.11
HDAC6-224ENST00000481929 TNIP3Q96KP6 325 aa15.73■□□□□ 0.11
HDAC6-224ENST00000481929 LGMNQ99538 433 aa15.73■□□□□ 0.11
HDAC6-224ENST00000481929 ELF4Q99607 663 aaPredicted RBP15.73■□□□□ 0.11
HDAC6-224ENST00000481929 FGFBP2Q9BYJ0 223 aa15.73■□□□□ 0.11
HDAC6-224ENST00000481929 KIAA1586Q9HCI6 787 aa15.73■□□□□ 0.11
HDAC6-224ENST00000481929 ZNF510Q9Y2H8 683 aa15.73■□□□□ 0.11
HDAC6-224ENST00000481929 PTPN13Q12923 2485 aa15.73■□□□□ 0.11
HDAC6-224ENST00000481929 B8ZZF3 427 aa15.72■□□□□ 0.11
HDAC6-224ENST00000481929 H3BQV1 296 aa15.72■□□□□ 0.11
HDAC6-224ENST00000481929 PYCARD-AS1I3L0S3 204 aa15.72■□□□□ 0.11
HDAC6-224ENST00000481929 MDM4O15151 490 aa15.72■□□□□ 0.11
HDAC6-224ENST00000481929 STC2O76061 302 aa15.72■□□□□ 0.11
HDAC6-224ENST00000481929 STAU1O95793 577 aaKnown RBP15.72■□□□□ 0.11
HDAC6-224ENST00000481929 CHKAP35790 457 aa15.72■□□□□ 0.11
HDAC6-224ENST00000481929 KCNH2Q12809 1159 aa15.72■□□□□ 0.11
HDAC6-224ENST00000481929 CAMK2GQ13555 558 aaPredicted RBP15.72■□□□□ 0.11
HDAC6-224ENST00000481929 BROXQ5VW32 411 aa15.72■□□□□ 0.11
HDAC6-224ENST00000481929 KLHDC10Q6PID8 442 aa15.72■□□□□ 0.11
HDAC6-224ENST00000481929 SV2BQ7L1I2 683 aa15.72■□□□□ 0.11
HDAC6-224ENST00000481929 ERICH1Q86X53 443 aa15.72■□□□□ 0.11
HDAC6-224ENST00000481929 FUKQ8N0W3 1084 aa15.72■□□□□ 0.11
HDAC6-224ENST00000481929 ZMIZ2Q8NF64 920 aa15.72■□□□□ 0.11
HDAC6-224ENST00000481929 SORCS1Q8WY21 1168 aa15.72■□□□□ 0.11
HDAC6-224ENST00000481929 SKA1Q96BD8 255 aa15.72■□□□□ 0.11
HDAC6-224ENST00000481929 PIWIL1Q96J94 861 aaKnown RBP15.72■□□□□ 0.11
HDAC6-224ENST00000481929 CGRRF1Q99675 332 aa15.72■□□□□ 0.11
HDAC6-224ENST00000481929 SMOQ99835 787 aa15.72■□□□□ 0.11
HDAC6-224ENST00000481929 SMYD3Q9H7B4 428 aa15.72■□□□□ 0.11
HDAC6-224ENST00000481929 OSER1Q9NX31 292 aa15.72■□□□□ 0.11
HDAC6-224ENST00000481929 HSPBP1Q9NZL4 362 aa15.72■□□□□ 0.11
HDAC6-224ENST00000481929 CCDC39Q9UFE4 941 aa15.72■□□□□ 0.11
HDAC6-224ENST00000481929 VILLO15195 856 aa15.71■□□□□ 0.11
HDAC6-224ENST00000481929 CYP26A1O43174 497 aa15.71■□□□□ 0.11
HDAC6-224ENST00000481929 CLSTN1O94985 981 aa15.71■□□□□ 0.11
HDAC6-224ENST00000481929 RARGP13631 454 aa15.71■□□□□ 0.11
HDAC6-224ENST00000481929 ATICP31939 592 aa15.71■□□□□ 0.11
HDAC6-224ENST00000481929 UCNP55089 124 aa15.71■□□□□ 0.11
HDAC6-224ENST00000481929 MAP3K7CLP57077 242 aa15.71■□□□□ 0.11
HDAC6-224ENST00000481929 TMPRSS3P57727 454 aa15.71■□□□□ 0.11
HDAC6-224ENST00000481929 MYL6P60660 151 aa15.71■□□□□ 0.11
HDAC6-224ENST00000481929 RACK1P63244 317 aaKnown RBP15.71■□□□□ 0.11
HDAC6-224ENST00000481929 C10orf120Q5SQS8 335 aa15.71■□□□□ 0.11
HDAC6-224ENST00000481929 FMNL3Q8IVF7 1028 aa15.71■□□□□ 0.11
HDAC6-224ENST00000481929 EID2Q8N6I1 236 aa15.71■□□□□ 0.11
HDAC6-224ENST00000481929 ZNF248Q8NDW4 579 aa15.71■□□□□ 0.11
HDAC6-224ENST00000481929 SYAP1Q96A49 352 aaPredicted RBP15.71■□□□□ 0.11
HDAC6-224ENST00000481929 SGK2Q9HBY8 427 aa15.71■□□□□ 0.11
HDAC6-224ENST00000481929 NUDT5Q9UKK9 219 aa15.71■□□□□ 0.11
HDAC6-224ENST00000481929 SCML2Q9UQR0 700 aa15.71■□□□□ 0.11
HDAC6-224ENST00000481929 MYLKQ15746 1914 aa15.7■□□□□ 0.1
HDAC6-224ENST00000481929 YKT6O15498 198 aa15.7■□□□□ 0.1
HDAC6-224ENST00000481929 TIMM44O43615 452 aa15.7■□□□□ 0.1
HDAC6-224ENST00000481929 EIF5BO60841 1220 aaKnown RBP15.7■□□□□ 0.1
HDAC6-224ENST00000481929 BEST1O76090 585 aa15.7■□□□□ 0.1
HDAC6-224ENST00000481929 WISP1O95388 367 aa15.7■□□□□ 0.1
HDAC6-224ENST00000481929 DNTTP04053 509 aa15.7■□□□□ 0.1
HDAC6-224ENST00000481929 CYBBP04839 570 aa15.7■□□□□ 0.1
HDAC6-224ENST00000481929 C6P13671 934 aa15.7■□□□□ 0.1
HDAC6-224ENST00000481929 CCDC130P13994 396 aa15.7■□□□□ 0.1
HDAC6-224ENST00000481929 GLDCP23378 1020 aa15.7■□□□□ 0.1
HDAC6-224ENST00000481929 ZBTB16Q05516 673 aa15.7■□□□□ 0.1
HDAC6-224ENST00000481929 ILKQ13418 452 aa15.7■□□□□ 0.1
HDAC6-224ENST00000481929 SNRNP35Q16560 246 aaKnown RBP15.7■□□□□ 0.1
HDAC6-224ENST00000481929 TTC31Q49AM3 519 aaPredicted RBP15.7■□□□□ 0.1
HDAC6-224ENST00000481929 PKDCCQ504Y2 493 aa15.7■□□□□ 0.1
HDAC6-224ENST00000481929 PRAMEF14Q5SWL7 426 aa15.7■□□□□ 0.1
HDAC6-224ENST00000481929 STXBP4Q6ZWJ1 553 aa15.7■□□□□ 0.1
HDAC6-224ENST00000481929 TADA2BQ86TJ2 420 aa15.7■□□□□ 0.1
HDAC6-224ENST00000481929 RBBP8NLQ8NC74 664 aaPredicted RBP15.7■□□□□ 0.1
HDAC6-224ENST00000481929 SAP25Q8TEE9 199 aa15.7■□□□□ 0.1
HDAC6-224ENST00000481929 TSC1Q92574 1164 aa15.7■□□□□ 0.1
HDAC6-224ENST00000481929 EPSTI1Q96J88 318 aa15.7■□□□□ 0.1
HDAC6-224ENST00000481929 ORAI3Q9BRQ5 295 aa15.7■□□□□ 0.1
HDAC6-224ENST00000481929 SEMA4CQ9C0C4 833 aa15.7■□□□□ 0.1
HDAC6-224ENST00000481929 FBRSQ9HAH7 460 aa15.7■□□□□ 0.1
HDAC6-224ENST00000481929 CSNK1G1Q9HCP0 422 aa15.7■□□□□ 0.1
HDAC6-224ENST00000481929 PANK4Q9NVE7 773 aa15.7■□□□□ 0.1
HDAC6-224ENST00000481929 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.7■□□□□ 0.1
HDAC6-224ENST00000481929 A0A1W2PQH9 124 aa15.69■□□□□ 0.1
HDAC6-224ENST00000481929 FRMD3A2A2Y4 597 aa15.69■□□□□ 0.1
HDAC6-224ENST00000481929 KLKB1P03952 638 aa15.69■□□□□ 0.1
HDAC6-224ENST00000481929 PCBP4P57723 403 aaKnown RBP15.69■□□□□ 0.1
HDAC6-224ENST00000481929 PSMD6Q15008 389 aa15.69■□□□□ 0.1
HDAC6-224ENST00000481929 FNDC3BQ53EP0 1204 aaKnown RBP15.69■□□□□ 0.1
HDAC6-224ENST00000481929 ARHGAP40Q5TG30 622 aa15.69■□□□□ 0.1
HDAC6-224ENST00000481929 RRAGBQ5VZM2 374 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms