RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 CHKAP35790 457 aa19.42■□□□□ 0.7
CLK1-211ENST00000481641 MFAP3P55082 362 aa19.42■□□□□ 0.7
CLK1-211ENST00000481641 BYSLQ13895 437 aaKnown RBP19.42■□□□□ 0.7
CLK1-211ENST00000481641 MORC3Q14149 939 aa19.42■□□□□ 0.7
CLK1-211ENST00000481641 PKDCCQ504Y2 493 aa19.42■□□□□ 0.7
CLK1-211ENST00000481641 BSPRYQ5W0U4 402 aa19.42■□□□□ 0.7
CLK1-211ENST00000481641 RRAGAQ7L523 313 aa19.42■□□□□ 0.7
CLK1-211ENST00000481641 ARHGEF19Q8IW93 802 aa19.42■□□□□ 0.7
CLK1-211ENST00000481641 PPM1KQ8N3J5 372 aa19.42■□□□□ 0.7
CLK1-211ENST00000481641 LMO3Q8TAP4 145 aa19.42■□□□□ 0.7
CLK1-211ENST00000481641 IPO9Q96P70 1041 aaKnown RBP19.42■□□□□ 0.7
CLK1-211ENST00000481641 CYP8B1Q9UNU6 501 aa19.42■□□□□ 0.7
CLK1-211ENST00000481641 ACACBO00763 2458 aa19.42■□□□□ 0.7
CLK1-211ENST00000481641 PI4KAP42356 2102 aa19.42■□□□□ 0.7
CLK1-211ENST00000481641 IGHV1OR15-9A0A0B4J2B8 117 aa19.41■□□□□ 0.7
CLK1-211ENST00000481641 CDX4O14627 284 aaPredicted RBP19.41■□□□□ 0.7
CLK1-211ENST00000481641 TSPAN3O60637 253 aa19.41■□□□□ 0.7
CLK1-211ENST00000481641 KCNK5O95279 499 aa19.41■□□□□ 0.7
CLK1-211ENST00000481641 ITPKAP23677 461 aa19.41■□□□□ 0.7
CLK1-211ENST00000481641 BRD2P25440 801 aaKnown RBP19.41■□□□□ 0.7
CLK1-211ENST00000481641 RPL6Q02878 288 aaKnown RBP19.41■□□□□ 0.7
CLK1-211ENST00000481641 TRIP4Q15650 581 aaPredicted RBP19.41■□□□□ 0.7
CLK1-211ENST00000481641 TRIM61Q5EBN2 209 aa19.41■□□□□ 0.7
CLK1-211ENST00000481641 LYSMD4Q5XG99 296 aa19.41■□□□□ 0.7
CLK1-211ENST00000481641 PMF1Q6P1K2 205 aa19.41■□□□□ 0.7
CLK1-211ENST00000481641 LCLAT1Q6UWP7 414 aa19.41■□□□□ 0.7
CLK1-211ENST00000481641 SIX6OS1Q8N1H7 587 aa19.41■□□□□ 0.7
CLK1-211ENST00000481641 FSCN3Q9NQT6 498 aa19.41■□□□□ 0.7
CLK1-211ENST00000481641 SLC27A6Q9Y2P4 619 aa19.41■□□□□ 0.7
CLK1-211ENST00000481641 STON1Q9Y6Q2 735 aa19.41■□□□□ 0.7
CLK1-211ENST00000481641 GIPC1O14908 333 aa19.4■□□□□ 0.7
CLK1-211ENST00000481641 PMM2O15305 246 aa19.4■□□□□ 0.7
CLK1-211ENST00000481641 MSI1O43347 362 aaKnown RBP19.4■□□□□ 0.7
CLK1-211ENST00000481641 PAEPP09466 180 aa19.4■□□□□ 0.7
CLK1-211ENST00000481641 SETSIPP0DME0 302 aa19.4■□□□□ 0.7
CLK1-211ENST00000481641 DAOAP59103 153 aa19.4■□□□□ 0.7
CLK1-211ENST00000481641 CPXM2Q8N436 756 aa19.4■□□□□ 0.7
CLK1-211ENST00000481641 DDI1Q8WTU0 396 aa19.4■□□□□ 0.7
CLK1-211ENST00000481641 RNF139Q8WU17 664 aa19.4■□□□□ 0.7
CLK1-211ENST00000481641 KCTD13Q8WZ19 329 aa19.4■□□□□ 0.7
CLK1-211ENST00000481641 PLD4Q96BZ4 506 aa19.4■□□□□ 0.7
CLK1-211ENST00000481641 PIWIL1Q96J94 861 aaKnown RBP19.4■□□□□ 0.7
CLK1-211ENST00000481641 KIAA1257Q9ULG3 409 aa19.4■□□□□ 0.7
CLK1-211ENST00000481641 M0QYV0 167 aa19.39■□□□□ 0.69
CLK1-211ENST00000481641 CYBBP04839 570 aa19.39■□□□□ 0.69
CLK1-211ENST00000481641 PPP1R2P41236 205 aa19.39■□□□□ 0.69
CLK1-211ENST00000481641 IL12RB1P42701 662 aa19.39■□□□□ 0.69
CLK1-211ENST00000481641 KCNH2Q12809 1159 aa19.39■□□□□ 0.69
CLK1-211ENST00000481641 UAP1L1Q3KQV9 507 aa19.39■□□□□ 0.69
CLK1-211ENST00000481641 PSAPL1Q6NUJ1 521 aa19.39■□□□□ 0.69
CLK1-211ENST00000481641 KIAA1324Q6UXG2 1013 aaKnown RBP19.39■□□□□ 0.69
CLK1-211ENST00000481641 SYT12Q8IV01 421 aa19.39■□□□□ 0.69
CLK1-211ENST00000481641 FAM217AQ8IXS0 508 aa19.39■□□□□ 0.69
CLK1-211ENST00000481641 RBBP8NLQ8NC74 664 aaPredicted RBP19.39■□□□□ 0.69
CLK1-211ENST00000481641 EHBP1Q8NDI1 1231 aa19.39■□□□□ 0.69
CLK1-211ENST00000481641 CLEC4CQ8WTT0 213 aa19.39■□□□□ 0.69
CLK1-211ENST00000481641 SLC35F5Q8WV83 523 aa19.39■□□□□ 0.69
CLK1-211ENST00000481641 SORCS1Q8WY21 1168 aa19.39■□□□□ 0.69
CLK1-211ENST00000481641 MRGPRX1Q96LB2 322 aa19.39■□□□□ 0.69
CLK1-211ENST00000481641 SRRTQ9BXP5 876 aaKnown RBP19.39■□□□□ 0.69
CLK1-211ENST00000481641 TMEM9BQ9NQ34 198 aa19.39■□□□□ 0.69
CLK1-211ENST00000481641 OLA1Q9NTK5 396 aaKnown RBP19.39■□□□□ 0.69
CLK1-211ENST00000481641 THAP10Q9P2Z0 257 aaPredicted RBP19.39■□□□□ 0.69
CLK1-211ENST00000481641 PILRBQ9UKJ0 227 aa19.39■□□□□ 0.69
CLK1-211ENST00000481641 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.39■□□□□ 0.69
CLK1-211ENST00000481641 ADAMTS9Q9P2N4 1935 aa19.39■□□□□ 0.69
CLK1-211ENST00000481641 CHD8Q9HCK8 2581 aa19.39■□□□□ 0.69
CLK1-211ENST00000481641 BICDL2A1A5D9 508 aa19.38■□□□□ 0.69
CLK1-211ENST00000481641 GFRA2O00451 464 aa19.38■□□□□ 0.69
CLK1-211ENST00000481641 ZBTB24O43167 697 aaPredicted RBP19.38■□□□□ 0.69
CLK1-211ENST00000481641 AP5Z1O43299 807 aa19.38■□□□□ 0.69
CLK1-211ENST00000481641 HARS2P49590 506 aaKnown RBP19.38■□□□□ 0.69
CLK1-211ENST00000481641 CNGA2Q16280 664 aa19.38■□□□□ 0.69
CLK1-211ENST00000481641 TMEM215Q68D42 235 aa19.38■□□□□ 0.69
CLK1-211ENST00000481641 SLC36A4Q6YBV0 504 aa19.38■□□□□ 0.69
CLK1-211ENST00000481641 SLC41A1Q8IVJ1 513 aa19.38■□□□□ 0.69
CLK1-211ENST00000481641 TRIM59Q8IWR1 403 aa19.38■□□□□ 0.69
CLK1-211ENST00000481641 ASCC3Q8N3C0 2202 aaKnown RBP19.38■□□□□ 0.69
CLK1-211ENST00000481641 KREMEN1Q96MU8 473 aa19.38■□□□□ 0.69
CLK1-211ENST00000481641 CNGB3Q9NQW8 809 aa19.38■□□□□ 0.69
CLK1-211ENST00000481641 ABCC13Q9NSE7 274 aa19.38■□□□□ 0.69
CLK1-211ENST00000481641 EVLQ9UI08 416 aaPredicted RBP19.38■□□□□ 0.69
CLK1-211ENST00000481641 HBS1LQ9Y450 684 aaKnown RBP19.38■□□□□ 0.69
CLK1-211ENST00000481641 P4HA2O15460 535 aa19.37■□□□□ 0.69
CLK1-211ENST00000481641 MAPK8P45983 427 aa19.37■□□□□ 0.69
CLK1-211ENST00000481641 NOVA1P51513 510 aaKnown RBP19.37■□□□□ 0.69
CLK1-211ENST00000481641 ZNF33AQ06730 810 aa19.37■□□□□ 0.69
CLK1-211ENST00000481641 CETN1Q12798 172 aa19.37■□□□□ 0.69
CLK1-211ENST00000481641 PAK1Q13153 545 aa19.37■□□□□ 0.69
CLK1-211ENST00000481641 FUT11Q495W5 492 aa19.37■□□□□ 0.69
CLK1-211ENST00000481641 SPDYCQ5MJ68 293 aa19.37■□□□□ 0.69
CLK1-211ENST00000481641 DAB2IPQ5VWQ8 1189 aa19.37■□□□□ 0.69
CLK1-211ENST00000481641 ANKS1BQ7Z6G8 1248 aa19.37■□□□□ 0.69
CLK1-211ENST00000481641 NUSAP1Q9BXS6 441 aaKnown RBP19.37■□□□□ 0.69
CLK1-211ENST00000481641 CIPCQ9C0C6 399 aa19.37■□□□□ 0.69
CLK1-211ENST00000481641 ELOVL2Q9NXB9 296 aa19.37■□□□□ 0.69
CLK1-211ENST00000481641 EPG5Q9HCE0 2579 aa19.37■□□□□ 0.69
CLK1-211ENST00000481641 GOLGA6L7A0A1B0GV03 622 aa19.36■□□□□ 0.69
CLK1-211ENST00000481641 ZNF217O75362 1048 aa19.36■□□□□ 0.69
CLK1-211ENST00000481641 CFIP05156 583 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 248 ms