RNA–Protein interactions for RNA: ENST00000480562.3

ABCF3-214, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 1 (best)

Gene ABCF3, Length 1,182 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-214ENST00000480562 ADAMTS9Q9P2N4 1935 aa19.72■□□□□ 0.75
ABCF3-214ENST00000480562 SLC16A3O15427 465 aaKnown RBP19.72■□□□□ 0.75
ABCF3-214ENST00000480562 TOP3BO95985 862 aaKnown RBP19.72■□□□□ 0.75
ABCF3-214ENST00000480562 CD19P15391 556 aa19.72■□□□□ 0.75
ABCF3-214ENST00000480562 ATXN3P54252 364 aaPredicted RBP19.72■□□□□ 0.75
ABCF3-214ENST00000480562 FKBP3Q00688 224 aaKnown RBP19.72■□□□□ 0.75
ABCF3-214ENST00000480562 GFPT1Q06210 699 aaPredicted RBP19.72■□□□□ 0.75
ABCF3-214ENST00000480562 FUT11Q495W5 492 aa19.72■□□□□ 0.75
ABCF3-214ENST00000480562 SGO2Q562F6 1265 aa19.72■□□□□ 0.75
ABCF3-214ENST00000480562 PM20D1Q6GTS8 502 aa19.72■□□□□ 0.75
ABCF3-214ENST00000480562 CEP76Q8TAP6 659 aa19.72■□□□□ 0.75
ABCF3-214ENST00000480562 LRRC4Q9HBW1 653 aa19.72■□□□□ 0.75
ABCF3-214ENST00000480562 CAPN10Q9HC96 672 aa19.72■□□□□ 0.75
ABCF3-214ENST00000480562 XPO1O14980 1071 aaKnown RBP19.71■□□□□ 0.75
ABCF3-214ENST00000480562 NDUFS2O75306 463 aa19.71■□□□□ 0.75
ABCF3-214ENST00000480562 SERPINF2P08697 491 aa19.71■□□□□ 0.75
ABCF3-214ENST00000480562 IL12RB1P42701 662 aa19.71■□□□□ 0.75
ABCF3-214ENST00000480562 BCAT1P54687 386 aa19.71■□□□□ 0.75
ABCF3-214ENST00000480562 ADIGQ0VDE8 80 aa19.71■□□□□ 0.75
ABCF3-214ENST00000480562 STARD3Q14849 445 aa19.71■□□□□ 0.75
ABCF3-214ENST00000480562 COBLL1Q53SF7 1204 aa19.71■□□□□ 0.75
ABCF3-214ENST00000480562 CPXM2Q8N436 756 aa19.71■□□□□ 0.75
ABCF3-214ENST00000480562 ENGASEQ8NFI3 743 aa19.71■□□□□ 0.75
ABCF3-214ENST00000480562 OR2I1PQ8NGU4 316 aa19.71■□□□□ 0.75
ABCF3-214ENST00000480562 DDI1Q8WTU0 396 aa19.71■□□□□ 0.75
ABCF3-214ENST00000480562 PIWIL1Q96J94 861 aaKnown RBP19.71■□□□□ 0.75
ABCF3-214ENST00000480562 GSDMAQ96QA5 445 aa19.71■□□□□ 0.75
ABCF3-214ENST00000480562 FAM124BQ9H5Z6 455 aaPredicted RBP19.71■□□□□ 0.75
ABCF3-214ENST00000480562 THAP10Q9P2Z0 257 aaPredicted RBP19.71■□□□□ 0.75
ABCF3-214ENST00000480562 HESX1Q9UBX0 185 aa19.71■□□□□ 0.75
ABCF3-214ENST00000480562 ARMCX3Q9UH62 379 aaPredicted RBP19.71■□□□□ 0.75
ABCF3-214ENST00000480562 GOLGA6L4A6NEF3 574 aa19.7■□□□□ 0.74
ABCF3-214ENST00000480562 SMC2O95347 1197 aa19.7■□□□□ 0.74
ABCF3-214ENST00000480562 CYBBP04839 570 aa19.7■□□□□ 0.74
ABCF3-214ENST00000480562 BST2Q10589 180 aaKnown RBP19.7■□□□□ 0.74
ABCF3-214ENST00000480562 ANKS1BQ7Z6G8 1248 aa19.7■□□□□ 0.74
ABCF3-214ENST00000480562 FMNL3Q8IVF7 1028 aa19.7■□□□□ 0.74
ABCF3-214ENST00000480562 RGL4Q8IZJ4 473 aa19.7■□□□□ 0.74
ABCF3-214ENST00000480562 UBR7Q8N806 425 aa19.7■□□□□ 0.74
ABCF3-214ENST00000480562 UCMAQ8WVF2 138 aa19.7■□□□□ 0.74
ABCF3-214ENST00000480562 SORCS1Q8WY21 1168 aa19.7■□□□□ 0.74
ABCF3-214ENST00000480562 EDEM1Q92611 657 aa19.7■□□□□ 0.74
ABCF3-214ENST00000480562 SMARCE1Q969G3 411 aa19.7■□□□□ 0.74
ABCF3-214ENST00000480562 SLC35C1Q96A29 364 aa19.7■□□□□ 0.74
ABCF3-214ENST00000480562 PLD4Q96BZ4 506 aa19.7■□□□□ 0.74
ABCF3-214ENST00000480562 ZNF419Q96HQ0 510 aaPredicted RBP19.7■□□□□ 0.74
ABCF3-214ENST00000480562 IPO9Q96P70 1041 aaKnown RBP19.7■□□□□ 0.74
ABCF3-214ENST00000480562 MKRN2Q9H000 416 aaKnown RBP19.7■□□□□ 0.74
ABCF3-214ENST00000480562 PRDM16Q9HAZ2 1276 aa19.7■□□□□ 0.74
ABCF3-214ENST00000480562 SFMBT1Q9UHJ3 866 aa19.7■□□□□ 0.74
ABCF3-214ENST00000480562 WASF3Q9UPY6 502 aa19.7■□□□□ 0.74
ABCF3-214ENST00000480562 CACNA1EQ15878 2313 aa19.69■□□□□ 0.74
ABCF3-214ENST00000480562 YJEFN3A6XGL0 299 aa19.69■□□□□ 0.74
ABCF3-214ENST00000480562 C1QTNF9BB2RNN3 333 aa19.69■□□□□ 0.74
ABCF3-214ENST00000480562 E7ENQ6 273 aa19.69■□□□□ 0.74
ABCF3-214ENST00000480562 TSPAN3O60637 253 aa19.69■□□□□ 0.74
ABCF3-214ENST00000480562 C1QTNF9P0C862 333 aa19.69■□□□□ 0.74
ABCF3-214ENST00000480562 MAOBP27338 520 aa19.69■□□□□ 0.74
ABCF3-214ENST00000480562 YWHAEP62258 255 aaKnown RBP19.69■□□□□ 0.74
ABCF3-214ENST00000480562 LRRC63Q05C16 580 aa19.69■□□□□ 0.74
ABCF3-214ENST00000480562 SEMA3BQ13214 749 aa19.69■□□□□ 0.74
ABCF3-214ENST00000480562 ZNF234Q14588 700 aa19.69■□□□□ 0.74
ABCF3-214ENST00000480562 TRIP4Q15650 581 aaPredicted RBP19.69■□□□□ 0.74
ABCF3-214ENST00000480562 BSPRYQ5W0U4 402 aa19.69■□□□□ 0.74
ABCF3-214ENST00000480562 ISM2Q6H9L7 571 aa19.69■□□□□ 0.74
ABCF3-214ENST00000480562 HDDC3Q8N4P3 179 aa19.69■□□□□ 0.74
ABCF3-214ENST00000480562 SPATA20Q8TB22 786 aa19.69■□□□□ 0.74
ABCF3-214ENST00000480562 RNF139Q8WU17 664 aa19.69■□□□□ 0.74
ABCF3-214ENST00000480562 CIPCQ9C0C6 399 aa19.69■□□□□ 0.74
ABCF3-214ENST00000480562 SLC32A1Q9H598 525 aa19.69■□□□□ 0.74
ABCF3-214ENST00000480562 ELOVL2Q9NXB9 296 aa19.69■□□□□ 0.74
ABCF3-214ENST00000480562 PCDH15Q96QU1 1955 aa19.68■□□□□ 0.74
ABCF3-214ENST00000480562 SPAARA0A1B0GVQ0 90 aa19.68■□□□□ 0.74
ABCF3-214ENST00000480562 O00370 1275 aa19.68■□□□□ 0.74
ABCF3-214ENST00000480562 ARHGAP33O14559 1287 aa19.68■□□□□ 0.74
ABCF3-214ENST00000480562 SYNCRIPO60506 623 aaKnown RBP19.68■□□□□ 0.74
ABCF3-214ENST00000480562 VDRP11473 427 aa19.68■□□□□ 0.74
ABCF3-214ENST00000480562 LCP1P13796 627 aa19.68■□□□□ 0.74
ABCF3-214ENST00000480562 PRKCHP24723 683 aa19.68■□□□□ 0.74
ABCF3-214ENST00000480562 CD6P30203 668 aa19.68■□□□□ 0.74
ABCF3-214ENST00000480562 ENPP2Q13822 863 aa19.68■□□□□ 0.74
ABCF3-214ENST00000480562 TMEM215Q68D42 235 aa19.68■□□□□ 0.74
ABCF3-214ENST00000480562 RABEPKQ7Z6M1 372 aa19.68■□□□□ 0.74
ABCF3-214ENST00000480562 PIP4P1Q86T03 277 aa19.68■□□□□ 0.74
ABCF3-214ENST00000480562 CACUL1Q86Y37 369 aa19.68■□□□□ 0.74
ABCF3-214ENST00000480562 FAM217AQ8IXS0 508 aa19.68■□□□□ 0.74
ABCF3-214ENST00000480562 SIX6OS1Q8N1H7 587 aa19.68■□□□□ 0.74
ABCF3-214ENST00000480562 MINDY1Q8N5J2 469 aa19.68■□□□□ 0.74
ABCF3-214ENST00000480562 RBBP8NLQ8NC74 664 aaPredicted RBP19.68■□□□□ 0.74
ABCF3-214ENST00000480562 TFAP2BQ92481 460 aa19.68■□□□□ 0.74
ABCF3-214ENST00000480562 TOE1Q96GM8 510 aaKnown RBP19.68■□□□□ 0.74
ABCF3-214ENST00000480562 OLA1Q9NTK5 396 aaKnown RBP19.68■□□□□ 0.74
ABCF3-214ENST00000480562 KCNJ18B7U540 433 aa19.67■□□□□ 0.74
ABCF3-214ENST00000480562 PIK3R2O00459 728 aa19.67■□□□□ 0.74
ABCF3-214ENST00000480562 NPC1O15118 1278 aa19.67■□□□□ 0.74
ABCF3-214ENST00000480562 MSI1O43347 362 aaKnown RBP19.67■□□□□ 0.74
ABCF3-214ENST00000480562 OPHN1O60890 802 aa19.67■□□□□ 0.74
ABCF3-214ENST00000480562 PROS1P07225 676 aa19.67■□□□□ 0.74
ABCF3-214ENST00000480562 FMO5P49326 533 aa19.67■□□□□ 0.74
ABCF3-214ENST00000480562 HARS2P49590 506 aaKnown RBP19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms