RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 TCEAL6Q6IPX3 200 aa9.49□□□□□ -0.89
VCP-206ENST00000480327 CEP68Q76N32 757 aa9.49□□□□□ -0.89
VCP-206ENST00000480327 ZNF571Q7Z3V5 609 aaPredicted RBP9.49□□□□□ -0.89
VCP-206ENST00000480327 PHLDB2Q86SQ0 1253 aa9.49□□□□□ -0.89
VCP-206ENST00000480327 ZNF677Q86XU0 584 aa9.49□□□□□ -0.89
VCP-206ENST00000480327 SCUBE3Q8IX30 993 aa9.49□□□□□ -0.89
VCP-206ENST00000480327 MAB21L3Q8N8X9 362 aa9.49□□□□□ -0.89
VCP-206ENST00000480327 TMEM35BQ8NCS4 154 aa9.49□□□□□ -0.89
VCP-206ENST00000480327 SLC30A5Q8TAD4 765 aa9.49□□□□□ -0.89
VCP-206ENST00000480327 KCTD13Q8WZ19 329 aa9.49□□□□□ -0.89
VCP-206ENST00000480327 TCEAL3Q969E4 200 aa9.49□□□□□ -0.89
VCP-206ENST00000480327 PPP1R13BQ96KQ4 1090 aa9.49□□□□□ -0.89
VCP-206ENST00000480327 CPXM1Q96SM3 734 aa9.49□□□□□ -0.89
VCP-206ENST00000480327 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.49□□□□□ -0.89
VCP-206ENST00000480327 SLC4A5Q9BY07 1137 aa9.49□□□□□ -0.89
VCP-206ENST00000480327 NUCKS1Q9H1E3 243 aaKnown RBP9.49□□□□□ -0.89
VCP-206ENST00000480327 LHX5Q9H2C1 402 aa9.49□□□□□ -0.89
VCP-206ENST00000480327 SYNCQ9H7C4 482 aa9.49□□□□□ -0.89
VCP-206ENST00000480327 NMUR1Q9HB89 426 aa9.49□□□□□ -0.89
VCP-206ENST00000480327 PNPLA8Q9NP80 782 aa9.49□□□□□ -0.89
VCP-206ENST00000480327 COMMD8Q9NX08 183 aa9.49□□□□□ -0.89
VCP-206ENST00000480327 OSER1Q9NX31 292 aa9.49□□□□□ -0.89
VCP-206ENST00000480327 IL37Q9NZH6 218 aa9.49□□□□□ -0.89
VCP-206ENST00000480327 NAGPAQ9UK23 515 aa9.49□□□□□ -0.89
VCP-206ENST00000480327 NUDT5Q9UKK9 219 aa9.49□□□□□ -0.89
VCP-206ENST00000480327 SCML2Q9UQR0 700 aa9.49□□□□□ -0.89
VCP-206ENST00000480327 ASCC3Q8N3C0 2202 aaKnown RBP9.48□□□□□ -0.89
VCP-206ENST00000480327 CCDC163A0A0D9SF12 145 aa9.48□□□□□ -0.89
VCP-206ENST00000480327 ZNF840PA6NDX5 716 aa9.48□□□□□ -0.89
VCP-206ENST00000480327 YJEFN3A6XGL0 299 aa9.48□□□□□ -0.89
VCP-206ENST00000480327 E7ENQ6 273 aa9.48□□□□□ -0.89
VCP-206ENST00000480327 RPP40O75818 363 aaKnown RBP9.48□□□□□ -0.89
VCP-206ENST00000480327 CYP1A1P04798 512 aaPredicted RBP9.48□□□□□ -0.89
VCP-206ENST00000480327 SERPING1P05155 500 aa9.48□□□□□ -0.89
VCP-206ENST00000480327 CHRM1P11229 460 aaPredicted RBP9.48□□□□□ -0.89
VCP-206ENST00000480327 GJA4P35212 333 aa9.48□□□□□ -0.89
VCP-206ENST00000480327 ACADSBP45954 432 aa9.48□□□□□ -0.89
VCP-206ENST00000480327 YWHAGP61981 247 aaKnown RBP eCLIP9.48□□□□□ -0.89
VCP-206ENST00000480327 NOMO3P69849 1222 aa9.48□□□□□ -0.89
VCP-206ENST00000480327 ZXDBP98169 803 aa9.48□□□□□ -0.89
VCP-206ENST00000480327 ZNF77Q15935 545 aa9.48□□□□□ -0.89
VCP-206ENST00000480327 MEA1Q16626 185 aa9.48□□□□□ -0.89
VCP-206ENST00000480327 TSR1Q2NL82 804 aaKnown RBP9.48□□□□□ -0.89
VCP-206ENST00000480327 PTPN20Q4JDL3 420 aa9.48□□□□□ -0.89
VCP-206ENST00000480327 HGSNATQ68CP4 663 aa9.48□□□□□ -0.89
VCP-206ENST00000480327 SMYD5Q6GMV2 418 aa9.48□□□□□ -0.89
VCP-206ENST00000480327 OR6B2Q6IFH4 312 aa9.48□□□□□ -0.89
VCP-206ENST00000480327 MMS22LQ6ZRQ5 1243 aa9.48□□□□□ -0.89
VCP-206ENST00000480327 CCDC186Q7Z3E2 898 aa9.48□□□□□ -0.89
VCP-206ENST00000480327 SCD5Q86SK9 330 aa9.48□□□□□ -0.89
VCP-206ENST00000480327 MON1AQ86VX9 555 aa9.48□□□□□ -0.89
VCP-206ENST00000480327 ERICH1Q86X53 443 aa9.48□□□□□ -0.89
VCP-206ENST00000480327 DNAAF5Q86Y56 855 aa9.48□□□□□ -0.89
VCP-206ENST00000480327 FMNL3Q8IVF7 1028 aa9.48□□□□□ -0.89
VCP-206ENST00000480327 ARL14EPQ8N8R7 260 aaPredicted RBP9.48□□□□□ -0.89
VCP-206ENST00000480327 PDZD8Q8NEN9 1154 aa9.48□□□□□ -0.89
VCP-206ENST00000480327 OR8K1Q8NGG5 319 aa9.48□□□□□ -0.89
VCP-206ENST00000480327 EDEM1Q92611 657 aa9.48□□□□□ -0.89
VCP-206ENST00000480327 SYN2Q92777 582 aaPredicted RBP9.48□□□□□ -0.89
VCP-206ENST00000480327 ZC3H10Q96K80 434 aaKnown RBP9.48□□□□□ -0.89
VCP-206ENST00000480327 HSFY1Q96LI6 401 aa9.48□□□□□ -0.89
VCP-206ENST00000480327 NOX5Q96PH1 765 aa9.48□□□□□ -0.89
VCP-206ENST00000480327 HHIPQ96QV1 700 aa9.48□□□□□ -0.89
VCP-206ENST00000480327 DUSP15Q9H1R2 295 aaPredicted RBP9.48□□□□□ -0.89
VCP-206ENST00000480327 CCSER2Q9H7U1 834 aa9.48□□□□□ -0.89
VCP-206ENST00000480327 TLR8Q9NR97 1041 aaKnown RBP9.48□□□□□ -0.89
VCP-206ENST00000480327 ABHD10Q9NUJ1 306 aa9.48□□□□□ -0.89
VCP-206ENST00000480327 TDP1Q9NUW8 608 aa9.48□□□□□ -0.89
VCP-206ENST00000480327 ZNHIT6Q9NWK9 470 aaKnown RBP9.48□□□□□ -0.89
VCP-206ENST00000480327 USP3Q9Y6I4 520 aa9.48□□□□□ -0.89
VCP-206ENST00000480327 NBEAQ8NFP9 2946 aa9.48□□□□□ -0.89
VCP-206ENST00000480327 IGF2RP11717 2491 aa9.47□□□□□ -0.89
VCP-206ENST00000480327 DMXL2Q8TDJ6 3036 aa9.47□□□□□ -0.89
VCP-206ENST00000480327 TRAV19A0A0A6YYK7 116 aa9.47□□□□□ -0.89
VCP-206ENST00000480327 FAM92AA1XBS5 289 aa9.47□□□□□ -0.89
VCP-206ENST00000480327 GOLGA8SH3BPF8 625 aa9.47□□□□□ -0.89
VCP-206ENST00000480327 DDX3XO00571 662 aaKnown RBP eCLIP9.47□□□□□ -0.89
VCP-206ENST00000480327 DCLK1O15075 740 aa9.47□□□□□ -0.89
VCP-206ENST00000480327 MDM4O15151 490 aa9.47□□□□□ -0.89
VCP-206ENST00000480327 PAPSS1O43252 624 aaPredicted RBP9.47□□□□□ -0.89
VCP-206ENST00000480327 GRAP2O75791 330 aa9.47□□□□□ -0.89
VCP-206ENST00000480327 LSM8O95777 96 aaKnown RBP9.47□□□□□ -0.89
VCP-206ENST00000480327 TBX18O95935 607 aa9.47□□□□□ -0.89
VCP-206ENST00000480327 CKMP06732 381 aa9.47□□□□□ -0.89
VCP-206ENST00000480327 RARGP13631 454 aa9.47□□□□□ -0.89
VCP-206ENST00000480327 HDCP19113 662 aa9.47□□□□□ -0.89
VCP-206ENST00000480327 CDH5P33151 784 aaPredicted RBP9.47□□□□□ -0.89
VCP-206ENST00000480327 EIF4A3P38919 411 aaKnown RBP9.47□□□□□ -0.89
VCP-206ENST00000480327 PRKCIP41743 596 aa9.47□□□□□ -0.89
VCP-206ENST00000480327 NSFP46459 744 aaKnown RBP9.47□□□□□ -0.89
VCP-206ENST00000480327 DAOAP59103 153 aa9.47□□□□□ -0.89
VCP-206ENST00000480327 USP4Q13107 963 aa9.47□□□□□ -0.89
VCP-206ENST00000480327 ZNF268Q14587 947 aaPredicted RBP9.47□□□□□ -0.89
VCP-206ENST00000480327 TAF5Q15542 800 aa9.47□□□□□ -0.89
VCP-206ENST00000480327 CLEC16AQ2KHT3 1053 aa9.47□□□□□ -0.89
VCP-206ENST00000480327 GAB4Q2WGN9 574 aa9.47□□□□□ -0.89
VCP-206ENST00000480327 PLK5Q496M5 336 aa9.47□□□□□ -0.89
VCP-206ENST00000480327 HECTD3Q5T447 861 aa9.47□□□□□ -0.89
VCP-206ENST00000480327 STPG1Q5TH74 334 aa9.47□□□□□ -0.89
VCP-206ENST00000480327 BTBD8Q5XKL5 378 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms