RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 PNOCQ13519 176 aa5.2□□□□□ -1.58
PTCD3-213ENST00000480102 STILQ15468 1287 aa5.2□□□□□ -1.58
PTCD3-213ENST00000480102 ZNF699Q32M78 642 aa5.2□□□□□ -1.58
PTCD3-213ENST00000480102 PDZD4Q76G19 769 aaPredicted RBP5.2□□□□□ -1.58
PTCD3-213ENST00000480102 DNAJB7Q7Z6W7 309 aaPredicted RBP5.2□□□□□ -1.58
PTCD3-213ENST00000480102 MFSD6LQ8IWD5 586 aa5.2□□□□□ -1.58
PTCD3-213ENST00000480102 TRIM59Q8IWR1 403 aa5.2□□□□□ -1.58
PTCD3-213ENST00000480102 NELFCDQ8IXH7 590 aa5.2□□□□□ -1.58
PTCD3-213ENST00000480102 PLD6Q8N2A8 252 aaKnown RBP5.2□□□□□ -1.58
PTCD3-213ENST00000480102 FAM181AQ8N9Y4 354 aa5.2□□□□□ -1.58
PTCD3-213ENST00000480102 ZSWIM2Q8NEG5 633 aa5.2□□□□□ -1.58
PTCD3-213ENST00000480102 FLCNQ8NFG4 579 aa5.2□□□□□ -1.58
PTCD3-213ENST00000480102 PLEKHO2Q8TD55 490 aa5.2□□□□□ -1.58
PTCD3-213ENST00000480102 SMARCD2Q92925 531 aa5.2□□□□□ -1.58
PTCD3-213ENST00000480102 CCDC127Q96BQ5 260 aa5.2□□□□□ -1.58
PTCD3-213ENST00000480102 RPGRIP1Q96KN7 1286 aa5.2□□□□□ -1.58
PTCD3-213ENST00000480102 MYADMQ96S97 322 aa5.2□□□□□ -1.58
PTCD3-213ENST00000480102 HNRNPABQ99729 332 aaKnown RBP5.2□□□□□ -1.58
PTCD3-213ENST00000480102 SYT15Q9BQS2 421 aa5.2□□□□□ -1.58
PTCD3-213ENST00000480102 WNT10AQ9GZT5 417 aa5.2□□□□□ -1.58
PTCD3-213ENST00000480102 MIR1-1HGQ9H1L0 117 aa5.2□□□□□ -1.58
PTCD3-213ENST00000480102 IKZF4Q9H2S9 585 aa5.2□□□□□ -1.58
PTCD3-213ENST00000480102 CLSTN2Q9H4D0 955 aa5.2□□□□□ -1.58
PTCD3-213ENST00000480102 PCIF1Q9H4Z3 704 aa5.2□□□□□ -1.58
PTCD3-213ENST00000480102 TASP1Q9H6P5 420 aa5.2□□□□□ -1.58
PTCD3-213ENST00000480102 FBRSQ9HAH7 460 aa5.2□□□□□ -1.58
PTCD3-213ENST00000480102 LMBRD1Q9NUN5 540 aa5.2□□□□□ -1.58
PTCD3-213ENST00000480102 RAB20Q9NX57 234 aa5.2□□□□□ -1.58
PTCD3-213ENST00000480102 CACNG4Q9UBN1 327 aa5.2□□□□□ -1.58
PTCD3-213ENST00000480102 MAN1B1Q9UKM7 699 aa5.2□□□□□ -1.58
PTCD3-213ENST00000480102 CNTN6Q9UQ52 1028 aa5.2□□□□□ -1.58
PTCD3-213ENST00000480102 MRPS23Q9Y3D9 190 aaKnown RBP5.2□□□□□ -1.58
PTCD3-213ENST00000480102 U3KQE9 123 aa5.2□□□□□ -1.58
PTCD3-213ENST00000480102 WDR81Q562E7 1941 aa5.2□□□□□ -1.58
PTCD3-213ENST00000480102 ATP8B3O60423 1300 aa5.2□□□□□ -1.58
PTCD3-213ENST00000480102 GOLGA8IPA6NC78 632 aa5.19□□□□□ -1.58
PTCD3-213ENST00000480102 LRRC10BA6NIK2 292 aa5.19□□□□□ -1.58
PTCD3-213ENST00000480102 GOLGA8JA6NMD2 632 aa5.19□□□□□ -1.58
PTCD3-213ENST00000480102 I3L4J1 428 aa5.19□□□□□ -1.58
PTCD3-213ENST00000480102 ARNTLO00327 626 aa5.19□□□□□ -1.58
PTCD3-213ENST00000480102 MAN2B1O00754 1011 aa5.19□□□□□ -1.58
PTCD3-213ENST00000480102 CHADO15335 359 aa5.19□□□□□ -1.58
PTCD3-213ENST00000480102 MOSPD3O75425 235 aa5.19□□□□□ -1.58
PTCD3-213ENST00000480102 LRIG2O94898 1065 aa5.19□□□□□ -1.58
PTCD3-213ENST00000480102 RTN3O95197 1032 aaPredicted RBP5.19□□□□□ -1.58
PTCD3-213ENST00000480102 PAPSS2O95340 614 aaPredicted RBP5.19□□□□□ -1.58
PTCD3-213ENST00000480102 CEACAM5P06731 702 aa5.19□□□□□ -1.58
PTCD3-213ENST00000480102 KRT19P08727 400 aa5.19□□□□□ -1.58
PTCD3-213ENST00000480102 PAEPP09466 180 aa5.19□□□□□ -1.58
PTCD3-213ENST00000480102 CCDC192P0DO97 292 aa5.19□□□□□ -1.58
PTCD3-213ENST00000480102 PSMC3P17980 439 aa5.19□□□□□ -1.58
PTCD3-213ENST00000480102 PTPN1P18031 435 aaKnown RBP5.19□□□□□ -1.58
PTCD3-213ENST00000480102 ATF6P18850 670 aa5.19□□□□□ -1.58
PTCD3-213ENST00000480102 TFE3P19532 575 aaPredicted RBP5.19□□□□□ -1.58
PTCD3-213ENST00000480102 FCARP24071 287 aa5.19□□□□□ -1.58
PTCD3-213ENST00000480102 CA8P35219 290 aa5.19□□□□□ -1.58
PTCD3-213ENST00000480102 GNL1P36915 607 aaPredicted RBP5.19□□□□□ -1.58
PTCD3-213ENST00000480102 RPS9P46781 194 aaKnown RBP5.19□□□□□ -1.58
PTCD3-213ENST00000480102 CASP4P49662 377 aa5.19□□□□□ -1.58
PTCD3-213ENST00000480102 GUCY2FP51841 1108 aa5.19□□□□□ -1.58
PTCD3-213ENST00000480102 PMS1P54277 932 aaKnown RBP5.19□□□□□ -1.58
PTCD3-213ENST00000480102 OXCT1P55809 520 aa5.19□□□□□ -1.58
PTCD3-213ENST00000480102 MYL6P60660 151 aa5.19□□□□□ -1.58
PTCD3-213ENST00000480102 SLC7A9P82251 487 aa5.19□□□□□ -1.58
PTCD3-213ENST00000480102 SPAG1Q07617 926 aa5.19□□□□□ -1.58
PTCD3-213ENST00000480102 PPP3CAQ08209 521 aa5.19□□□□□ -1.58
PTCD3-213ENST00000480102 TWF1Q12792 350 aa5.19□□□□□ -1.58
PTCD3-213ENST00000480102 SLC39A12Q504Y0 691 aa5.19□□□□□ -1.58
PTCD3-213ENST00000480102 ARHGAP15Q53QZ3 475 aa5.19□□□□□ -1.58
PTCD3-213ENST00000480102 ARHGAP17Q68EM7 881 aa5.19□□□□□ -1.58
PTCD3-213ENST00000480102 ANKRD40Q6AI12 368 aa5.19□□□□□ -1.58
PTCD3-213ENST00000480102 EP400NLQ6ZTU2 488 aa5.19□□□□□ -1.58
PTCD3-213ENST00000480102 DENND5BQ6ZUT9 1274 aa5.19□□□□□ -1.58
PTCD3-213ENST00000480102 GAREM2Q75VX8 874 aa5.19□□□□□ -1.58
PTCD3-213ENST00000480102 BEND5Q7L4P6 421 aa5.19□□□□□ -1.58
PTCD3-213ENST00000480102 ARMCX6Q7L4S7 300 aa5.19□□□□□ -1.58
PTCD3-213ENST00000480102 GRASPQ7Z6J2 395 aaPredicted RBP5.19□□□□□ -1.58
PTCD3-213ENST00000480102 LRRTM3Q86VH5 581 aa5.19□□□□□ -1.58
PTCD3-213ENST00000480102 MON1AQ86VX9 555 aa5.19□□□□□ -1.58
PTCD3-213ENST00000480102 SPATA2LQ8IUW3 424 aaPredicted RBP5.19□□□□□ -1.58
PTCD3-213ENST00000480102 SUGP1Q8IWZ8 645 aaKnown RBP5.19□□□□□ -1.58
PTCD3-213ENST00000480102 TP53INP2Q8IXH6 220 aa5.19□□□□□ -1.58
PTCD3-213ENST00000480102 SYNPOQ8N3V7 929 aa5.19□□□□□ -1.58
PTCD3-213ENST00000480102 SLC44A3Q8N4M1 653 aa5.19□□□□□ -1.58
PTCD3-213ENST00000480102 C12orf76Q8N812 135 aaPredicted RBP5.19□□□□□ -1.58
PTCD3-213ENST00000480102 ATAD1Q8NBU5 361 aa5.19□□□□□ -1.58
PTCD3-213ENST00000480102 B3GALNT2Q8NCR0 500 aa5.19□□□□□ -1.58
PTCD3-213ENST00000480102 CCDC26Q8TAB7 109 aa5.19□□□□□ -1.58
PTCD3-213ENST00000480102 NETO1Q8TDF5 533 aa5.19□□□□□ -1.58
PTCD3-213ENST00000480102 TAS1R2Q8TE23 839 aa5.19□□□□□ -1.58
PTCD3-213ENST00000480102 RABGGTAQ92696 567 aa5.19□□□□□ -1.58
PTCD3-213ENST00000480102 RNF34Q969K3 372 aa5.19□□□□□ -1.58
PTCD3-213ENST00000480102 EXOC4Q96A65 974 aa5.19□□□□□ -1.58
PTCD3-213ENST00000480102 OTUB2Q96DC9 234 aa5.19□□□□□ -1.58
PTCD3-213ENST00000480102 MISP3Q96FF7 219 aa5.19□□□□□ -1.58
PTCD3-213ENST00000480102 SMARCD1Q96GM5 515 aa5.19□□□□□ -1.58
PTCD3-213ENST00000480102 PCED1BQ96HM7 432 aa5.19□□□□□ -1.58
PTCD3-213ENST00000480102 CDK5RAP1Q96SZ6 601 aaKnown RBP5.19□□□□□ -1.58
PTCD3-213ENST00000480102 LRFN3Q9BTN0 628 aa5.19□□□□□ -1.58
PTCD3-213ENST00000480102 NT5C1AQ9BXI3 368 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms