RNA–Protein interactions for RNA: ENST00000480022.1

CHD6-208, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 2,829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-208ENST00000480022 TFDP1Q14186 410 aa11.22□□□□□ -0.61
CHD6-208ENST00000480022 MORF4L2Q15014 288 aa11.22□□□□□ -0.61
CHD6-208ENST00000480022 CYTH1Q15438 398 aa11.22□□□□□ -0.61
CHD6-208ENST00000480022 TCHHL1Q5QJ38 904 aaPredicted RBP11.22□□□□□ -0.61
CHD6-208ENST00000480022 DCLRE1AQ6PJP8 1040 aa11.22□□□□□ -0.61
CHD6-208ENST00000480022 ANKMY2Q8IV38 441 aa11.22□□□□□ -0.61
CHD6-208ENST00000480022 CCDC33Q8N5R6 958 aa11.22□□□□□ -0.61
CHD6-208ENST00000480022 SHCBP1Q8NEM2 672 aa11.22□□□□□ -0.61
CHD6-208ENST00000480022 CHST13Q8NET6 341 aa11.22□□□□□ -0.61
CHD6-208ENST00000480022 GSDMBQ8TAX9 411 aa11.22□□□□□ -0.61
CHD6-208ENST00000480022 ANKRD36BP1Q96IX9 119 aa11.22□□□□□ -0.61
CHD6-208ENST00000480022 REEP2Q9BRK0 252 aa11.22□□□□□ -0.61
CHD6-208ENST00000480022 ACAD9Q9H845 621 aa11.22□□□□□ -0.61
CHD6-208ENST00000480022 PSTPIP2Q9H939 334 aa11.22□□□□□ -0.61
CHD6-208ENST00000480022 UBE2TQ9NPD8 197 aaPredicted RBP11.22□□□□□ -0.61
CHD6-208ENST00000480022 ATAD3AQ9NVI7 634 aa11.22□□□□□ -0.61
CHD6-208ENST00000480022 PROCP04070 461 aa11.22□□□□□ -0.61
CHD6-208ENST00000480022 TRIM49P0CI25 452 aa11.22□□□□□ -0.61
CHD6-208ENST00000480022 TRIM49CP0CI26 452 aa11.22□□□□□ -0.61
CHD6-208ENST00000480022 KCNC4Q03721 635 aa11.22□□□□□ -0.61
CHD6-208ENST00000480022 ATP1A4Q13733 1029 aa11.22□□□□□ -0.61
CHD6-208ENST00000480022 PDK1Q15118 436 aa11.22□□□□□ -0.61
CHD6-208ENST00000480022 ATG16L1Q676U5 607 aa11.22□□□□□ -0.61
CHD6-208ENST00000480022 MIER3Q7Z3K6 550 aa11.22□□□□□ -0.61
CHD6-208ENST00000480022 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.22□□□□□ -0.61
CHD6-208ENST00000480022 RUSC1Q9BVN2 902 aa11.22□□□□□ -0.61
CHD6-208ENST00000480022 MROH8Q9H579 483 aa11.22□□□□□ -0.61
CHD6-208ENST00000480022 WBP1LQ9NX94 342 aa11.22□□□□□ -0.61
CHD6-208ENST00000480022 NOX1Q9Y5S8 564 aa11.22□□□□□ -0.61
CHD6-208ENST00000480022 XPO1O14980 1071 aaKnown RBP11.21□□□□□ -0.61
CHD6-208ENST00000480022 MCF2LO15068 1137 aa11.21□□□□□ -0.61
CHD6-208ENST00000480022 TGFB1I1O43294 461 aa11.21□□□□□ -0.61
CHD6-208ENST00000480022 SLC26A4O43511 780 aa11.21□□□□□ -0.61
CHD6-208ENST00000480022 ESRRBO95718 433 aa11.21□□□□□ -0.61
CHD6-208ENST00000480022 KITP10721 976 aa11.21□□□□□ -0.61
CHD6-208ENST00000480022 PABPC1P11940 636 aaKnown RBP11.21□□□□□ -0.61
CHD6-208ENST00000480022 TKTP29401 623 aaKnown RBP11.21□□□□□ -0.61
CHD6-208ENST00000480022 MAPK4P31152 587 aa11.21□□□□□ -0.61
CHD6-208ENST00000480022 TMPRSS15P98073 1019 aa11.21□□□□□ -0.61
CHD6-208ENST00000480022 BST1Q10588 318 aa11.21□□□□□ -0.61
CHD6-208ENST00000480022 OGFOD2Q6N063 350 aa11.21□□□□□ -0.61
CHD6-208ENST00000480022 HPS6Q86YV9 775 aa11.21□□□□□ -0.61
CHD6-208ENST00000480022 TMEM126BQ8IUX1 230 aa11.21□□□□□ -0.61
CHD6-208ENST00000480022 ADCY4Q8NFM4 1077 aa11.21□□□□□ -0.61
CHD6-208ENST00000480022 DCAKDQ8WVC6 231 aa11.21□□□□□ -0.61
CHD6-208ENST00000480022 ACSS3Q9H6R3 686 aa11.21□□□□□ -0.61
CHD6-208ENST00000480022 CYP4F11Q9HBI6 524 aa11.21□□□□□ -0.61
CHD6-208ENST00000480022 OLFML3Q9NRN5 406 aa11.21□□□□□ -0.61
CHD6-208ENST00000480022 A0A1B0GTW7 788 aa11.21□□□□□ -0.62
CHD6-208ENST00000480022 DENND3A2RUS2 1198 aa11.21□□□□□ -0.62
CHD6-208ENST00000480022 PIAS1O75925 651 aa11.21□□□□□ -0.62
CHD6-208ENST00000480022 PARNO95453 639 aaKnown RBP11.21□□□□□ -0.62
CHD6-208ENST00000480022 SGPL1O95470 568 aa11.21□□□□□ -0.62
CHD6-208ENST00000480022 PSMC3P17980 439 aa11.21□□□□□ -0.62
CHD6-208ENST00000480022 SSTR1P30872 391 aa11.21□□□□□ -0.62
CHD6-208ENST00000480022 GPS1Q13098 491 aa11.21□□□□□ -0.62
CHD6-208ENST00000480022 RSPH3Q86UC2 560 aa11.21□□□□□ -0.62
CHD6-208ENST00000480022 CRLF3Q8IUI8 442 aa11.21□□□□□ -0.62
CHD6-208ENST00000480022 FBXW8Q8N3Y1 598 aa11.21□□□□□ -0.62
CHD6-208ENST00000480022 RNF169Q8NCN4 708 aa11.21□□□□□ -0.62
CHD6-208ENST00000480022 CLIP3Q96DZ5 547 aa11.21□□□□□ -0.62
CHD6-208ENST00000480022 THAP11Q96EK4 314 aa11.21□□□□□ -0.62
CHD6-208ENST00000480022 BEGAINQ9BUH8 593 aa11.21□□□□□ -0.62
CHD6-208ENST00000480022 SLC2A11Q9BYW1 496 aa11.21□□□□□ -0.62
CHD6-208ENST00000480022 CCDC68Q9H2F9 335 aa11.21□□□□□ -0.62
CHD6-208ENST00000480022 VPS45Q9NRW7 570 aa11.21□□□□□ -0.62
CHD6-208ENST00000480022 MARCOQ9UEW3 520 aaPredicted RBP11.21□□□□□ -0.62
CHD6-208ENST00000480022 FBXO40Q9UH90 709 aa11.21□□□□□ -0.62
CHD6-208ENST00000480022 ANAPC7Q9UJX3 599 aa11.21□□□□□ -0.62
CHD6-208ENST00000480022 ITGA11Q9UKX5 1188 aa11.21□□□□□ -0.62
CHD6-208ENST00000480022 CLUHO75153 1309 aa11.2□□□□□ -0.62
CHD6-208ENST00000480022 COL11A1P12107 1806 aaPredicted RBP11.2□□□□□ -0.62
CHD6-208ENST00000480022 IQANK1A0A1B0GTG1 560 aa11.2□□□□□ -0.62
CHD6-208ENST00000480022 SDR42E2A6NKP2 422 aa11.2□□□□□ -0.62
CHD6-208ENST00000480022 FAM47E-STBD1D6RA91 191 aa11.2□□□□□ -0.62
CHD6-208ENST00000480022 MEIS2O14770 477 aa11.2□□□□□ -0.62
CHD6-208ENST00000480022 MED24O75448 989 aa11.2□□□□□ -0.62
CHD6-208ENST00000480022 CFBP00751 764 aa11.2□□□□□ -0.62
CHD6-208ENST00000480022 EIF2S1P05198 315 aaKnown RBP11.2□□□□□ -0.62
CHD6-208ENST00000480022 ARSEP51690 589 aa11.2□□□□□ -0.62
CHD6-208ENST00000480022 CDKL1Q00532 357 aa11.2□□□□□ -0.62
CHD6-208ENST00000480022 SLC18A2Q05940 514 aa11.2□□□□□ -0.62
CHD6-208ENST00000480022 ADGRE1Q14246 886 aa11.2□□□□□ -0.62
CHD6-208ENST00000480022 UBE2SQ16763 222 aa11.2□□□□□ -0.62
CHD6-208ENST00000480022 SPOPLQ6IQ16 392 aa11.2□□□□□ -0.62
CHD6-208ENST00000480022 NANOGP8Q6NSW7 305 aa11.2□□□□□ -0.62
CHD6-208ENST00000480022 USP17L6PQ6QN14 398 aa11.2□□□□□ -0.62
CHD6-208ENST00000480022 POTEGQ6S5H5 508 aa11.2□□□□□ -0.62
CHD6-208ENST00000480022 MCF2L2Q86YR7 1114 aa11.2□□□□□ -0.62
CHD6-208ENST00000480022 TICAM1Q8IUC6 712 aa11.2□□□□□ -0.62
CHD6-208ENST00000480022 GALNT4Q8N4A0 578 aa11.2□□□□□ -0.62
CHD6-208ENST00000480022 GLIS1Q8NBF1 620 aa11.2□□□□□ -0.62
CHD6-208ENST00000480022 EPS8L1Q8TE68 723 aa11.2□□□□□ -0.62
CHD6-208ENST00000480022 E2F7Q96AV8 911 aa11.2□□□□□ -0.62
CHD6-208ENST00000480022 EFHD2Q96C19 240 aaPredicted RBP11.2□□□□□ -0.62
CHD6-208ENST00000480022 DCUN1D5Q9BTE7 237 aa11.2□□□□□ -0.62
CHD6-208ENST00000480022 OSBPL10Q9BXB5 764 aa11.2□□□□□ -0.62
CHD6-208ENST00000480022 PARVBQ9HBI1 364 aa11.2□□□□□ -0.62
CHD6-208ENST00000480022 EXOC7Q9UPT5 735 aa11.2□□□□□ -0.62
CHD6-208ENST00000480022 TIMM22Q9Y584 194 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms