RNA–Protein interactions for RNA: ENST00000479615.5

PRKN-207, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene PRKN, Length 904 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-207ENST00000479615 HMGB4Q8WW32 186 aa15.73■□□□□ 0.11
PRKN-207ENST00000479615 AZIN2Q96A70 460 aa15.73■□□□□ 0.11
PRKN-207ENST00000479615 UBE2TQ9NPD8 197 aaPredicted RBP15.73■□□□□ 0.11
PRKN-207ENST00000479615 CACNA1AO00555 2505 aa15.73■□□□□ 0.11
PRKN-207ENST00000479615 RNF225M0QZC1 329 aaPredicted RBP15.72■□□□□ 0.11
PRKN-207ENST00000479615 DCLK1O15075 740 aa15.72■□□□□ 0.11
PRKN-207ENST00000479615 HMBSP08397 361 aa15.72■□□□□ 0.11
PRKN-207ENST00000479615 HOXD12P35452 270 aa15.72■□□□□ 0.11
PRKN-207ENST00000479615 ANP32AP39687 249 aaKnown RBP15.72■□□□□ 0.11
PRKN-207ENST00000479615 RPL34P49207 117 aaKnown RBP15.72■□□□□ 0.11
PRKN-207ENST00000479615 SLC11A2P49281 568 aa15.72■□□□□ 0.11
PRKN-207ENST00000479615 RING1Q06587 406 aa15.72■□□□□ 0.11
PRKN-207ENST00000479615 STARD3Q14849 445 aa15.72■□□□□ 0.11
PRKN-207ENST00000479615 TPD52L1Q16890 204 aaPredicted RBP15.72■□□□□ 0.11
PRKN-207ENST00000479615 MPP7Q5T2T1 576 aa15.72■□□□□ 0.11
PRKN-207ENST00000479615 IL31Q6EBC2 164 aa15.72■□□□□ 0.11
PRKN-207ENST00000479615 ANKS1BQ7Z6G8 1248 aa15.72■□□□□ 0.11
PRKN-207ENST00000479615 ARHGEF19Q8IW93 802 aa15.72■□□□□ 0.11
PRKN-207ENST00000479615 DDX50Q9BQ39 737 aaKnown RBP15.72■□□□□ 0.11
PRKN-207ENST00000479615 ATG2BQ96BY7 2078 aa15.72■□□□□ 0.11
PRKN-207ENST00000479615 A0A1W2PQF6 199 aa15.71■□□□□ 0.11
PRKN-207ENST00000479615 PRRT4C9JH25 899 aa15.71■□□□□ 0.11
PRKN-207ENST00000479615 KHNYNO15037 678 aaKnown RBP15.71■□□□□ 0.11
PRKN-207ENST00000479615 TRIM24O15164 1050 aa15.71■□□□□ 0.11
PRKN-207ENST00000479615 IRAK2O43187 625 aa15.71■□□□□ 0.11
PRKN-207ENST00000479615 AP5Z1O43299 807 aa15.71■□□□□ 0.11
PRKN-207ENST00000479615 LTFP02788 710 aa15.71■□□□□ 0.11
PRKN-207ENST00000479615 KRT5P13647 590 aa15.71■□□□□ 0.11
PRKN-207ENST00000479615 BRD2P25440 801 aaKnown RBP15.71■□□□□ 0.11
PRKN-207ENST00000479615 ERCC5P28715 1186 aaPredicted RBP15.71■□□□□ 0.11
PRKN-207ENST00000479615 GPD2P43304 727 aa15.71■□□□□ 0.11
PRKN-207ENST00000479615 SNX16P57768 344 aa15.71■□□□□ 0.11
PRKN-207ENST00000479615 NNTQ13423 1086 aa15.71■□□□□ 0.11
PRKN-207ENST00000479615 EXOC3L4Q17RC7 722 aa15.71■□□□□ 0.11
PRKN-207ENST00000479615 MAP7D1Q3KQU3 841 aa15.71■□□□□ 0.11
PRKN-207ENST00000479615 EGFLAMQ63HQ2 1017 aa15.71■□□□□ 0.11
PRKN-207ENST00000479615 TOGARAM2Q6ZUX3 1019 aa15.71■□□□□ 0.11
PRKN-207ENST00000479615 CYP2U1Q7Z449 544 aa15.71■□□□□ 0.11
PRKN-207ENST00000479615 RABEPKQ7Z6M1 372 aa15.71■□□□□ 0.11
PRKN-207ENST00000479615 CREBRFQ8IUR6 639 aa15.71■□□□□ 0.11
PRKN-207ENST00000479615 IPO4Q8TEX9 1081 aaKnown RBP15.71■□□□□ 0.11
PRKN-207ENST00000479615 EDEM1Q92611 657 aa15.71■□□□□ 0.11
PRKN-207ENST00000479615 KAT5Q92993 513 aa15.71■□□□□ 0.11
PRKN-207ENST00000479615 TMA16Q96EY4 203 aaKnown RBP15.71■□□□□ 0.11
PRKN-207ENST00000479615 KREMEN1Q96MU8 473 aa15.71■□□□□ 0.11
PRKN-207ENST00000479615 MED15Q96RN5 788 aa15.71■□□□□ 0.11
PRKN-207ENST00000479615 CLSTN2Q9H4D0 955 aa15.71■□□□□ 0.11
PRKN-207ENST00000479615 THAP9Q9H5L6 903 aa15.71■□□□□ 0.11
PRKN-207ENST00000479615 PLK2Q9NYY3 685 aa15.71■□□□□ 0.11
PRKN-207ENST00000479615 APEX2Q9UBZ4 518 aa15.71■□□□□ 0.11
PRKN-207ENST00000479615 MYO16Q9Y6X6 1858 aa15.7■□□□□ 0.1
PRKN-207ENST00000479615 GABRG2P18507 467 aa15.7■□□□□ 0.1
PRKN-207ENST00000479615 RGS7P49802 495 aa15.7■□□□□ 0.1
PRKN-207ENST00000479615 ENPP2Q13822 863 aa15.7■□□□□ 0.1
PRKN-207ENST00000479615 TRIM65Q6PJ69 517 aa15.7■□□□□ 0.1
PRKN-207ENST00000479615 CLEC17AQ6ZS10 378 aa15.7■□□□□ 0.1
PRKN-207ENST00000479615 METTL3Q86U44 580 aaKnown RBP15.7■□□□□ 0.1
PRKN-207ENST00000479615 WFIKKN2Q8TEU8 576 aa15.7■□□□□ 0.1
PRKN-207ENST00000479615 ZNF606Q8WXB4 792 aa15.7■□□□□ 0.1
PRKN-207ENST00000479615 NDRG1Q92597 394 aaKnown RBP15.7■□□□□ 0.1
PRKN-207ENST00000479615 BHMTQ93088 406 aa15.7■□□□□ 0.1
PRKN-207ENST00000479615 PIWIL1Q96J94 861 aaKnown RBP15.7■□□□□ 0.1
PRKN-207ENST00000479615 SERPINB11Q96P15 392 aa15.7■□□□□ 0.1
PRKN-207ENST00000479615 ZSWIM1Q9BR11 485 aa15.7■□□□□ 0.1
PRKN-207ENST00000479615 ELOVL2Q9NXB9 296 aa15.7■□□□□ 0.1
PRKN-207ENST00000479615 THAP10Q9P2Z0 257 aaPredicted RBP15.7■□□□□ 0.1
PRKN-207ENST00000479615 SFMBT1Q9UHJ3 866 aa15.7■□□□□ 0.1
PRKN-207ENST00000479615 HCN2Q9UL51 889 aa15.7■□□□□ 0.1
PRKN-207ENST00000479615 DCHS1Q96JQ0 3298 aa15.69■□□□□ 0.1
PRKN-207ENST00000479615 TYW5A2RUC4 315 aaKnown RBP15.69■□□□□ 0.1
PRKN-207ENST00000479615 ANTXRLA6NF34 631 aa15.69■□□□□ 0.1
PRKN-207ENST00000479615 SYNCRIPO60506 623 aaKnown RBP15.69■□□□□ 0.1
PRKN-207ENST00000479615 IGLV3-27P01718 113 aa15.69■□□□□ 0.1
PRKN-207ENST00000479615 NCAM1P13591 858 aa15.69■□□□□ 0.1
PRKN-207ENST00000479615 GNA15P30679 374 aa15.69■□□□□ 0.1
PRKN-207ENST00000479615 MTIF2P46199 727 aaKnown RBP15.69■□□□□ 0.1
PRKN-207ENST00000479615 DHPSP49366 369 aaPredicted RBP15.69■□□□□ 0.1
PRKN-207ENST00000479615 ARID5AQ03989 594 aa15.69■□□□□ 0.1
PRKN-207ENST00000479615 LMAN2Q12907 356 aa15.69■□□□□ 0.1
PRKN-207ENST00000479615 MTA1Q13330 715 aa15.69■□□□□ 0.1
PRKN-207ENST00000479615 SF3A2Q15428 464 aaKnown RBP15.69■□□□□ 0.1
PRKN-207ENST00000479615 TMEM110Q86TL2 294 aa15.69■□□□□ 0.1
PRKN-207ENST00000479615 SYT12Q8IV01 421 aa15.69■□□□□ 0.1
PRKN-207ENST00000479615 CEP76Q8TAP6 659 aa15.69■□□□□ 0.1
PRKN-207ENST00000479615 SLC4A5Q9BY07 1137 aa15.69■□□□□ 0.1
PRKN-207ENST00000479615 ST7Q9NRC1 585 aa15.69■□□□□ 0.1
PRKN-207ENST00000479615 EVLQ9UI08 416 aaPredicted RBP15.69■□□□□ 0.1
PRKN-207ENST00000479615 INVSQ9Y283 1065 aa15.69■□□□□ 0.1
PRKN-207ENST00000479615 STON1Q9Y6Q2 735 aa15.69■□□□□ 0.1
PRKN-207ENST00000479615 KIAA1549LQ6ZVL6 1849 aa15.68■□□□□ 0.1
PRKN-207ENST00000479615 SPAG17Q6Q759 2223 aa15.68■□□□□ 0.1
PRKN-207ENST00000479615 DMXL1Q9Y485 3027 aa15.68■□□□□ 0.1
PRKN-207ENST00000479615 MYOFQ9NZM1 2061 aa15.68■□□□□ 0.1
PRKN-207ENST00000479615 CAPN9O14815 690 aa15.68■□□□□ 0.1
PRKN-207ENST00000479615 GDF9O60383 454 aa15.68■□□□□ 0.1
PRKN-207ENST00000479615 LETM1O95202 739 aaPredicted RBP15.68■□□□□ 0.1
PRKN-207ENST00000479615 BCKDHBP21953 392 aa15.68■□□□□ 0.1
PRKN-207ENST00000479615 TBX4P57082 545 aa15.68■□□□□ 0.1
PRKN-207ENST00000479615 BPIFB4P59827 614 aa15.68■□□□□ 0.1
PRKN-207ENST00000479615 MAN2A1Q16706 1144 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms