RNA–Protein interactions for RNA: ENST00000479586.5

HMGN1-212, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 841 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-212ENST00000479586 TRPC3Q13507 836 aa18.24■□□□□ 0.51
HMGN1-212ENST00000479586 PSMD6Q15008 389 aa18.24■□□□□ 0.51
HMGN1-212ENST00000479586 SERPINA13PQ6UXR4 307 aa18.24■□□□□ 0.51
HMGN1-212ENST00000479586 SCARA5Q6ZMJ2 495 aa18.24■□□□□ 0.51
HMGN1-212ENST00000479586 ANKS1BQ7Z6G8 1248 aa18.24■□□□□ 0.51
HMGN1-212ENST00000479586 ACOT1Q86TX2 421 aa18.24■□□□□ 0.51
HMGN1-212ENST00000479586 OR2T3Q8NH03 318 aa18.24■□□□□ 0.51
HMGN1-212ENST00000479586 BAP1Q92560 729 aa18.24■□□□□ 0.51
HMGN1-212ENST00000479586 PIWIL1Q96J94 861 aaKnown RBP18.24■□□□□ 0.51
HMGN1-212ENST00000479586 TNIP3Q96KP6 325 aa18.24■□□□□ 0.51
HMGN1-212ENST00000479586 CIPCQ9C0C6 399 aa18.24■□□□□ 0.51
HMGN1-212ENST00000479586 GZF1Q9H116 711 aaPredicted RBP18.24■□□□□ 0.51
HMGN1-212ENST00000479586 SDCBP2Q9H190 292 aa18.24■□□□□ 0.51
HMGN1-212ENST00000479586 LHX5Q9H2C1 402 aa18.24■□□□□ 0.51
HMGN1-212ENST00000479586 KIAA1586Q9HCI6 787 aa18.24■□□□□ 0.51
HMGN1-212ENST00000479586 CSNK1G1Q9HCP0 422 aa18.24■□□□□ 0.51
HMGN1-212ENST00000479586 DNMT3LQ9UJW3 386 aa18.24■□□□□ 0.51
HMGN1-212ENST00000479586 CLEC4EQ9ULY5 219 aa18.24■□□□□ 0.51
HMGN1-212ENST00000479586 RFPL3O75679 317 aa18.23■□□□□ 0.51
HMGN1-212ENST00000479586 FSBPO95073 299 aa18.23■□□□□ 0.51
HMGN1-212ENST00000479586 SEMA4FO95754 770 aa18.23■□□□□ 0.51
HMGN1-212ENST00000479586 RARGP13631 454 aa18.23■□□□□ 0.51
HMGN1-212ENST00000479586 PLA2G4AP47712 749 aa18.23■□□□□ 0.51
HMGN1-212ENST00000479586 CYP24A1Q07973 514 aa18.23■□□□□ 0.51
HMGN1-212ENST00000479586 RTP5Q14D33 572 aa18.23■□□□□ 0.51
HMGN1-212ENST00000479586 C10orf120Q5SQS8 335 aa18.23■□□□□ 0.51
HMGN1-212ENST00000479586 PRAMEF14Q5SWL7 426 aa18.23■□□□□ 0.51
HMGN1-212ENST00000479586 HES3Q5TGS1 186 aa18.23■□□□□ 0.51
HMGN1-212ENST00000479586 TMEM215Q68D42 235 aa18.23■□□□□ 0.51
HMGN1-212ENST00000479586 ADAT2Q7Z6V5 191 aaKnown RBP18.23■□□□□ 0.51
HMGN1-212ENST00000479586 SLC2A14Q8TDB8 520 aa18.23■□□□□ 0.51
HMGN1-212ENST00000479586 SYAP1Q96A49 352 aaPredicted RBP18.23■□□□□ 0.51
HMGN1-212ENST00000479586 JAKMIP2Q96AA8 810 aa18.23■□□□□ 0.51
HMGN1-212ENST00000479586 ORAI3Q9BRQ5 295 aa18.23■□□□□ 0.51
HMGN1-212ENST00000479586 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.23■□□□□ 0.51
HMGN1-212ENST00000479586 SCML2Q9UQR0 700 aa18.23■□□□□ 0.51
HMGN1-212ENST00000479586 A0A1B0GTQ1 180 aa18.22■□□□□ 0.51
HMGN1-212ENST00000479586 A0A1W2PQH9 124 aa18.22■□□□□ 0.51
HMGN1-212ENST00000479586 PYCARD-AS1I3L0S3 204 aa18.22■□□□□ 0.51
HMGN1-212ENST00000479586 TSPAN3O60637 253 aa18.22■□□□□ 0.51
HMGN1-212ENST00000479586 CD27P26842 260 aa18.22■□□□□ 0.51
HMGN1-212ENST00000479586 ATICP31939 592 aa18.22■□□□□ 0.51
HMGN1-212ENST00000479586 CXADRP78310 365 aa18.22■□□□□ 0.51
HMGN1-212ENST00000479586 TLE3Q04726 772 aa18.22■□□□□ 0.51
HMGN1-212ENST00000479586 KLHDC10Q6PID8 442 aa18.22■□□□□ 0.51
HMGN1-212ENST00000479586 ZNF366Q8N895 744 aa18.22■□□□□ 0.51
HMGN1-212ENST00000479586 CNDP2Q96KP4 475 aaKnown RBP18.22■□□□□ 0.51
HMGN1-212ENST00000479586 NRSN2Q9GZP1 204 aa18.22■□□□□ 0.51
HMGN1-212ENST00000479586 FAM49BQ9NUQ9 324 aa18.22■□□□□ 0.51
HMGN1-212ENST00000479586 HMGXB4Q9UGU5 601 aa18.22■□□□□ 0.51
HMGN1-212ENST00000479586 PLXNA2O75051 1894 aa18.21■□□□□ 0.51
HMGN1-212ENST00000479586 CLSTN1O94985 981 aa18.21■□□□□ 0.51
HMGN1-212ENST00000479586 LDOC1O95751 146 aaPredicted RBP18.21■□□□□ 0.51
HMGN1-212ENST00000479586 ACADVLP49748 655 aa18.21■□□□□ 0.51
HMGN1-212ENST00000479586 CYP2J2P51589 502 aa18.21■□□□□ 0.51
HMGN1-212ENST00000479586 CCDC173Q0VFZ6 552 aa18.21■□□□□ 0.51
HMGN1-212ENST00000479586 CAMK2GQ13555 558 aaPredicted RBP18.21■□□□□ 0.51
HMGN1-212ENST00000479586 EIF4HQ15056 248 aaKnown RBP18.21■□□□□ 0.51
HMGN1-212ENST00000479586 ZNF699Q32M78 642 aa18.21■□□□□ 0.51
HMGN1-212ENST00000479586 FBXL19Q6PCT2 694 aa18.21■□□□□ 0.51
HMGN1-212ENST00000479586 FGF11Q92914 225 aa18.21■□□□□ 0.51
HMGN1-212ENST00000479586 CLIC6Q96NY7 704 aa18.21■□□□□ 0.51
HMGN1-212ENST00000479586 BTBD1Q9H0C5 482 aa18.21■□□□□ 0.51
HMGN1-212ENST00000479586 AGPAT3Q9NRZ7 376 aa18.21■□□□□ 0.51
HMGN1-212ENST00000479586 FBXO2Q9UK22 296 aaPredicted RBP18.21■□□□□ 0.51
HMGN1-212ENST00000479586 A0A087X0B3 334 aa18.2■□□□□ 0.5
HMGN1-212ENST00000479586 HHLA1C9JL84 531 aa18.2■□□□□ 0.5
HMGN1-212ENST00000479586 DFNA5O60443 496 aa18.2■□□□□ 0.5
HMGN1-212ENST00000479586 BRINP1O60477 761 aa18.2■□□□□ 0.5
HMGN1-212ENST00000479586 HMBSP08397 361 aa18.2■□□□□ 0.5
HMGN1-212ENST00000479586 SPACA3Q8IXA5 215 aa18.2■□□□□ 0.5
HMGN1-212ENST00000479586 CCDC65Q8IXS2 484 aa18.2■□□□□ 0.5
HMGN1-212ENST00000479586 C12orf29Q8N999 325 aa18.2■□□□□ 0.5
HMGN1-212ENST00000479586 PANK2Q9BZ23 570 aa18.2■□□□□ 0.5
HMGN1-212ENST00000479586 VRTNQ9H8Y1 702 aa18.2■□□□□ 0.5
HMGN1-212ENST00000479586 CLIC4Q9Y696 253 aa18.2■□□□□ 0.5
HMGN1-212ENST00000479586 CAPN8A6NHC0 703 aa18.19■□□□□ 0.5
HMGN1-212ENST00000479586 ERVH48-1M5A8F1 160 aa18.19■□□□□ 0.5
HMGN1-212ENST00000479586 VILLO15195 856 aa18.19■□□□□ 0.5
HMGN1-212ENST00000479586 CLIC2O15247 247 aa18.19■□□□□ 0.5
HMGN1-212ENST00000479586 TGFB1I1O43294 461 aa18.19■□□□□ 0.5
HMGN1-212ENST00000479586 EIF5BO60841 1220 aaKnown RBP18.19■□□□□ 0.5
HMGN1-212ENST00000479586 PHACTR2O75167 634 aa18.19■□□□□ 0.5
HMGN1-212ENST00000479586 IGHV4-34P06331 123 aa18.19■□□□□ 0.5
HMGN1-212ENST00000479586 C1SP09871 688 aa18.19■□□□□ 0.5
HMGN1-212ENST00000479586 ADORA2BP29275 332 aa18.19■□□□□ 0.5
HMGN1-212ENST00000479586 CORO1AP31146 461 aaKnown RBP18.19■□□□□ 0.5
HMGN1-212ENST00000479586 CHKAP35790 457 aa18.19■□□□□ 0.5
HMGN1-212ENST00000479586 STAT6P42226 847 aa18.19■□□□□ 0.5
HMGN1-212ENST00000479586 CASP4P49662 377 aa18.19■□□□□ 0.5
HMGN1-212ENST00000479586 BCAT1P54687 386 aa18.19■□□□□ 0.5
HMGN1-212ENST00000479586 C21orf59P57076 290 aa18.19■□□□□ 0.5
HMGN1-212ENST00000479586 ARID5AQ03989 594 aa18.19■□□□□ 0.5
HMGN1-212ENST00000479586 E2F5Q15329 346 aa18.19■□□□□ 0.5
HMGN1-212ENST00000479586 SHBQ15464 509 aa18.19■□□□□ 0.5
HMGN1-212ENST00000479586 TAF1BQ53T94 588 aaPredicted RBP18.19■□□□□ 0.5
HMGN1-212ENST00000479586 ZNF667Q5HYK9 610 aa18.19■□□□□ 0.5
HMGN1-212ENST00000479586 CLEC20AQ6ZU45 233 aa18.19■□□□□ 0.5
HMGN1-212ENST00000479586 STXBP4Q6ZWJ1 553 aa18.19■□□□□ 0.5
HMGN1-212ENST00000479586 BRAPQ7Z569 592 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms