RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 BCL7CQ8WUZ0 217 aaPredicted RBP6.56□□□□□ -1.36
SF3B1-209ENST00000479532 FAM210AQ96ND0 272 aa6.56□□□□□ -1.36
SF3B1-209ENST00000479532 CDCA3Q99618 268 aaPredicted RBP6.56□□□□□ -1.36
SF3B1-209ENST00000479532 GPR62Q9BZJ7 368 aa6.56□□□□□ -1.36
SF3B1-209ENST00000479532 INTS2Q9H0H0 1204 aaKnown RBP6.56□□□□□ -1.36
SF3B1-209ENST00000479532 TTYH1Q9H313 450 aaPredicted RBP6.56□□□□□ -1.36
SF3B1-209ENST00000479532 NSUN3Q9H649 340 aaKnown RBP6.56□□□□□ -1.36
SF3B1-209ENST00000479532 FBRSQ9HAH7 460 aa6.56□□□□□ -1.36
SF3B1-209ENST00000479532 CYP3A43Q9HB55 503 aa6.56□□□□□ -1.36
SF3B1-209ENST00000479532 FNIP2Q9P278 1114 aa6.56□□□□□ -1.36
SF3B1-209ENST00000479532 COQ4Q9Y3A0 265 aa6.56□□□□□ -1.36
SF3B1-209ENST00000479532 MSRB2Q9Y3D2 182 aa6.56□□□□□ -1.36
SF3B1-209ENST00000479532 DAAM1Q9Y4D1 1078 aa6.56□□□□□ -1.36
SF3B1-209ENST00000479532 TSC2P49815 1807 aa6.55□□□□□ -1.36
SF3B1-209ENST00000479532 ATP8B3O60423 1300 aa6.55□□□□□ -1.36
SF3B1-209ENST00000479532 VWA8A3KMH1 1905 aa6.55□□□□□ -1.36
SF3B1-209ENST00000479532 LGALS16A8MUM7 142 aa6.55□□□□□ -1.36
SF3B1-209ENST00000479532 UPK3BL1B0FP48 263 aa6.55□□□□□ -1.36
SF3B1-209ENST00000479532 B2RBV5 119 aa6.55□□□□□ -1.36
SF3B1-209ENST00000479532 UPK3BL2E5RIL1 263 aa6.55□□□□□ -1.36
SF3B1-209ENST00000479532 F8W810 466 aa6.55□□□□□ -1.36
SF3B1-209ENST00000479532 RFXAPO00287 272 aa6.55□□□□□ -1.36
SF3B1-209ENST00000479532 TNFRSF10CO14798 259 aa6.55□□□□□ -1.36
SF3B1-209ENST00000479532 TACC1O75410 805 aa6.55□□□□□ -1.36
SF3B1-209ENST00000479532 WARSP23381 471 aaKnown RBP6.55□□□□□ -1.36
SF3B1-209ENST00000479532 KLRC2P26717 231 aa6.55□□□□□ -1.36
SF3B1-209ENST00000479532 ELF1P32519 619 aa6.55□□□□□ -1.36
SF3B1-209ENST00000479532 GNL1P36915 607 aaPredicted RBP6.55□□□□□ -1.36
SF3B1-209ENST00000479532 FXR1P51114 621 aaKnown RBP eCLIP6.55□□□□□ -1.363e-9■■□□□ 14.3
SF3B1-209ENST00000479532 MFAP3P55082 362 aa6.55□□□□□ -1.36
SF3B1-209ENST00000479532 UBASH3AP57075 661 aa6.55□□□□□ -1.36
SF3B1-209ENST00000479532 ERVFC1P60507 584 aa6.55□□□□□ -1.36
SF3B1-209ENST00000479532 SMARCB1Q12824 385 aa6.55□□□□□ -1.36
SF3B1-209ENST00000479532 LRMPQ12912 555 aa6.55□□□□□ -1.36
SF3B1-209ENST00000479532 PTPN14Q15678 1187 aa6.55□□□□□ -1.36
SF3B1-209ENST00000479532 MAPRE1Q15691 268 aaKnown RBP6.55□□□□□ -1.36
SF3B1-209ENST00000479532 MIIPQ5JXC2 388 aa6.55□□□□□ -1.36
SF3B1-209ENST00000479532 RTP2Q5QGT7 225 aa6.55□□□□□ -1.36
SF3B1-209ENST00000479532 CDCP2Q5VXM1 449 aa6.55□□□□□ -1.36
SF3B1-209ENST00000479532 WSCD1Q658N2 575 aa6.55□□□□□ -1.36
SF3B1-209ENST00000479532 ANKRD34AQ69YU3 496 aa6.55□□□□□ -1.36
SF3B1-209ENST00000479532 UNC5AQ6ZN44 842 aa6.55□□□□□ -1.36
SF3B1-209ENST00000479532 SPRED2Q7Z698 418 aa6.55□□□□□ -1.36
SF3B1-209ENST00000479532 UBE3DQ7Z6J8 389 aa6.55□□□□□ -1.36
SF3B1-209ENST00000479532 HID1Q8IV36 788 aa6.55□□□□□ -1.36
SF3B1-209ENST00000479532 FMNL3Q8IVF7 1028 aa6.55□□□□□ -1.36
SF3B1-209ENST00000479532 MCATQ8IVS2 390 aaKnown RBP6.55□□□□□ -1.36
SF3B1-209ENST00000479532 MRPL43Q8N983 215 aaKnown RBP6.55□□□□□ -1.36
SF3B1-209ENST00000479532 NEK11Q8NG66 645 aa6.55□□□□□ -1.36
SF3B1-209ENST00000479532 OR6B3Q8NGW1 331 aa6.55□□□□□ -1.36
SF3B1-209ENST00000479532 CXorf38Q8TB03 319 aa6.55□□□□□ -1.36
SF3B1-209ENST00000479532 FAM84AQ96KN4 292 aa6.55□□□□□ -1.36
SF3B1-209ENST00000479532 TNIP3Q96KP6 325 aa6.55□□□□□ -1.36
SF3B1-209ENST00000479532 PI4K2AQ9BTU6 479 aa6.55□□□□□ -1.36
SF3B1-209ENST00000479532 FAM107BQ9H098 131 aa6.55□□□□□ -1.36
SF3B1-209ENST00000479532 XYLT2Q9H1B5 865 aa6.55□□□□□ -1.36
SF3B1-209ENST00000479532 DEF6Q9H4E7 631 aa6.55□□□□□ -1.36
SF3B1-209ENST00000479532 TLE6Q9H808 572 aa6.55□□□□□ -1.36
SF3B1-209ENST00000479532 PIDD1Q9HB75 910 aa6.55□□□□□ -1.36
SF3B1-209ENST00000479532 CHST7Q9NS84 486 aa6.55□□□□□ -1.36
SF3B1-209ENST00000479532 DDX43Q9NXZ2 648 aaKnown RBP6.55□□□□□ -1.36
SF3B1-209ENST00000479532 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.55□□□□□ -1.36
SF3B1-209ENST00000479532 MTRRQ9UBK8 725 aa6.55□□□□□ -1.36
SF3B1-209ENST00000479532 RSPH14Q9UHP6 348 aa6.55□□□□□ -1.36
SF3B1-209ENST00000479532 CDH9Q9ULB4 789 aa6.55□□□□□ -1.36
SF3B1-209ENST00000479532 L1RE1Q9UN81 338 aa6.55□□□□□ -1.36
SF3B1-209ENST00000479532 TIMM13Q9Y5L4 95 aaPredicted RBP6.55□□□□□ -1.36
SF3B1-209ENST00000479532 BACE2Q9Y5Z0 518 aa6.55□□□□□ -1.36
SF3B1-209ENST00000479532 ACTL7BQ9Y614 415 aa6.55□□□□□ -1.36
SF3B1-209ENST00000479532 IRAK3Q9Y616 596 aa6.55□□□□□ -1.36
SF3B1-209ENST00000479532 C2orf71A6NGG8 1288 aa6.54□□□□□ -1.36
SF3B1-209ENST00000479532 EPOPA6NHQ4 379 aa6.54□□□□□ -1.36
SF3B1-209ENST00000479532 LRRC10BA6NIK2 292 aa6.54□□□□□ -1.36
SF3B1-209ENST00000479532 A8MXQ7 604 aa6.54□□□□□ -1.36
SF3B1-209ENST00000479532 RNGTTO60942 597 aaKnown RBP6.54□□□□□ -1.36
SF3B1-209ENST00000479532 OAZ2O95190 189 aa6.54□□□□□ -1.36
SF3B1-209ENST00000479532 PAPLNO95428 1278 aa6.54□□□□□ -1.36
SF3B1-209ENST00000479532 GJB6O95452 261 aa6.54□□□□□ -1.36
SF3B1-209ENST00000479532 EFEMP2O95967 443 aa6.54□□□□□ -1.36
SF3B1-209ENST00000479532 GLUD1P00367 558 aa6.54□□□□□ -1.36
SF3B1-209ENST00000479532 C1RP00736 705 aa6.54□□□□□ -1.36
SF3B1-209ENST00000479532 TPM1P09493 284 aa6.54□□□□□ -1.36
SF3B1-209ENST00000479532 ATP1A3P13637 1013 aa6.54□□□□□ -1.36
SF3B1-209ENST00000479532 POU3F3P20264 500 aaPredicted RBP6.54□□□□□ -1.36
SF3B1-209ENST00000479532 DNAJB1P25685 340 aa6.54□□□□□ -1.36
SF3B1-209ENST00000479532 USP8P40818 1118 aa6.54□□□□□ -1.36
SF3B1-209ENST00000479532 ASPAP45381 313 aa6.54□□□□□ -1.36
SF3B1-209ENST00000479532 ARPP19P56211 112 aa6.54□□□□□ -1.36
SF3B1-209ENST00000479532 GCNT1Q02742 428 aa6.54□□□□□ -1.36
SF3B1-209ENST00000479532 CUL2Q13617 745 aa6.54□□□□□ -1.36
SF3B1-209ENST00000479532 NKG7Q16617 165 aa6.54□□□□□ -1.36
SF3B1-209ENST00000479532 NFE2Q16621 373 aaPredicted RBP6.54□□□□□ -1.36
SF3B1-209ENST00000479532 SOWAHAQ2M3V2 549 aa6.54□□□□□ -1.36
SF3B1-209ENST00000479532 LIN9Q5TKA1 542 aa6.54□□□□□ -1.36
SF3B1-209ENST00000479532 SPOPLQ6IQ16 392 aa6.54□□□□□ -1.36
SF3B1-209ENST00000479532 TRIM65Q6PJ69 517 aa6.54□□□□□ -1.36
SF3B1-209ENST00000479532 PRSS55Q6UWB4 352 aaPredicted RBP6.54□□□□□ -1.36
SF3B1-209ENST00000479532 C6orf15Q6UXA7 325 aaPredicted RBP6.54□□□□□ -1.36
SF3B1-209ENST00000479532 CD300LGQ6UXG3 332 aa6.54□□□□□ -1.36
SF3B1-209ENST00000479532 C4orf50Q6ZRC1 276 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms