RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 PEBP4Q96S96 227 aa13.77□□□□□ -0.21
PDZRN3-208ENST00000479530 CENPKQ9BS16 269 aa13.77□□□□□ -0.21
PDZRN3-208ENST00000479530 CYP4F11Q9HBI6 524 aa13.77□□□□□ -0.21
PDZRN3-208ENST00000479530 GPAMQ9HCL2 828 aa13.77□□□□□ -0.21
PDZRN3-208ENST00000479530 SOX13Q9UN79 622 aa13.77□□□□□ -0.21
PDZRN3-208ENST00000479530 MCF2LO15068 1137 aa13.77□□□□□ -0.21
PDZRN3-208ENST00000479530 ITGB3P05106 788 aa13.77□□□□□ -0.21
PDZRN3-208ENST00000479530 SERPINA6P08185 405 aa13.77□□□□□ -0.21
PDZRN3-208ENST00000479530 INHBCP55103 352 aa13.77□□□□□ -0.21
PDZRN3-208ENST00000479530 USP4Q13107 963 aa13.77□□□□□ -0.21
PDZRN3-208ENST00000479530 HIC1Q14526 733 aa13.77□□□□□ -0.21
PDZRN3-208ENST00000479530 EFHC1Q5JVL4 640 aa13.77□□□□□ -0.21
PDZRN3-208ENST00000479530 ATG16L1Q676U5 607 aa13.77□□□□□ -0.21
PDZRN3-208ENST00000479530 JADE1Q6IE81 842 aa13.77□□□□□ -0.21
PDZRN3-208ENST00000479530 FBXL19Q6PCT2 694 aa13.77□□□□□ -0.21
PDZRN3-208ENST00000479530 KYAT3Q6YP21 454 aaKnown RBP13.77□□□□□ -0.21
PDZRN3-208ENST00000479530 TSHZ1Q6ZSZ6 1077 aa13.77□□□□□ -0.21
PDZRN3-208ENST00000479530 ZBTB8OSQ8IWT0 167 aa13.77□□□□□ -0.21
PDZRN3-208ENST00000479530 NDUFAF2Q8N183 169 aa13.77□□□□□ -0.21
PDZRN3-208ENST00000479530 FAM81AQ8TBF8 368 aa13.77□□□□□ -0.21
PDZRN3-208ENST00000479530 OPTNQ96CV9 577 aa13.77□□□□□ -0.21
PDZRN3-208ENST00000479530 NMD3Q96D46 503 aaKnown RBP13.77□□□□□ -0.21
PDZRN3-208ENST00000479530 FZD8Q9H461 694 aa13.77□□□□□ -0.21
PDZRN3-208ENST00000479530 POPDC2Q9HBU9 364 aa13.77□□□□□ -0.21
PDZRN3-208ENST00000479530 CLIC5Q9NZA1 410 aa13.77□□□□□ -0.21
PDZRN3-208ENST00000479530 DNAJB4Q9UDY4 337 aa13.77□□□□□ -0.21
PDZRN3-208ENST00000479530 ZC3H7BQ9UGR2 993 aaKnown RBP13.77□□□□□ -0.21
PDZRN3-208ENST00000479530 EFR3BQ9Y2G0 817 aa13.77□□□□□ -0.21
PDZRN3-208ENST00000479530 ACKR2O00590 384 aa13.76□□□□□ -0.21
PDZRN3-208ENST00000479530 PGM3O95394 542 aa13.76□□□□□ -0.21
PDZRN3-208ENST00000479530 KRT7P08729 469 aa13.76□□□□□ -0.21
PDZRN3-208ENST00000479530 CYP3A5P20815 502 aa13.76□□□□□ -0.21
PDZRN3-208ENST00000479530 MIPP30301 263 aa13.76□□□□□ -0.21
PDZRN3-208ENST00000479530 MBTD1Q05BQ5 628 aa13.76□□□□□ -0.21
PDZRN3-208ENST00000479530 PABPC1LQ4VXU2 614 aaKnown RBP13.76□□□□□ -0.21
PDZRN3-208ENST00000479530 DPY19L2Q6NUT2 758 aa13.76□□□□□ -0.21
PDZRN3-208ENST00000479530 C16orf46Q6P387 395 aa13.76□□□□□ -0.21
PDZRN3-208ENST00000479530 C1orf228Q6PIY5 440 aa13.76□□□□□ -0.21
PDZRN3-208ENST00000479530 CAND1Q86VP6 1230 aaKnown RBP13.76□□□□□ -0.21
PDZRN3-208ENST00000479530 ADGRF2Q8IZF7 708 aa13.76□□□□□ -0.21
PDZRN3-208ENST00000479530 ST13P4Q8IZP2 240 aaPredicted RBP13.76□□□□□ -0.21
PDZRN3-208ENST00000479530 ARHGAP18Q8N392 663 aa13.76□□□□□ -0.21
PDZRN3-208ENST00000479530 NAT14Q8WUY8 206 aa13.76□□□□□ -0.21
PDZRN3-208ENST00000479530 PCDHGB4Q9UN71 923 aa13.76□□□□□ -0.21
PDZRN3-208ENST00000479530 PCDHGB5Q9Y5G0 923 aa13.76□□□□□ -0.21
PDZRN3-208ENST00000479530 POLR2AP24928 1970 aaKnown RBP13.76□□□□□ -0.21
PDZRN3-208ENST00000479530 KRT37O76014 449 aa13.76□□□□□ -0.21
PDZRN3-208ENST00000479530 DDNO94850 711 aaPredicted RBP13.76□□□□□ -0.21
PDZRN3-208ENST00000479530 MICAL2O94851 1124 aa13.76□□□□□ -0.21
PDZRN3-208ENST00000479530 GSRP00390 522 aa13.76□□□□□ -0.21
PDZRN3-208ENST00000479530 PROCP04070 461 aa13.76□□□□□ -0.21
PDZRN3-208ENST00000479530 BPGMP07738 259 aa13.76□□□□□ -0.21
PDZRN3-208ENST00000479530 TSHRP16473 764 aa13.76□□□□□ -0.21
PDZRN3-208ENST00000479530 VCLP18206 1134 aa13.76□□□□□ -0.21
PDZRN3-208ENST00000479530 ROR1Q01973 937 aa13.76□□□□□ -0.21
PDZRN3-208ENST00000479530 MED21Q13503 144 aa13.76□□□□□ -0.21
PDZRN3-208ENST00000479530 C15orf59Q2T9L4 293 aaPredicted RBP13.76□□□□□ -0.21
PDZRN3-208ENST00000479530 LRRC23Q53EV4 343 aaPredicted RBP13.76□□□□□ -0.21
PDZRN3-208ENST00000479530 TCHHL1Q5QJ38 904 aaPredicted RBP13.76□□□□□ -0.21
PDZRN3-208ENST00000479530 C12orf29Q8N999 325 aa13.76□□□□□ -0.21
PDZRN3-208ENST00000479530 CXorf38Q8TB03 319 aa13.76□□□□□ -0.21
PDZRN3-208ENST00000479530 GDPD5Q8WTR4 605 aa13.76□□□□□ -0.21
PDZRN3-208ENST00000479530 C1orf21Q9H246 121 aa13.76□□□□□ -0.21
PDZRN3-208ENST00000479530 LMCD1Q9NZU5 365 aa13.76□□□□□ -0.21
PDZRN3-208ENST00000479530 SLC17A6Q9P2U8 582 aa13.76□□□□□ -0.21
PDZRN3-208ENST00000479530 B4GALT4O60513 344 aa13.75□□□□□ -0.21
PDZRN3-208ENST00000479530 ZMPSTE24O75844 475 aa13.75□□□□□ -0.21
PDZRN3-208ENST00000479530 TNNC2P02585 160 aa13.75□□□□□ -0.21
PDZRN3-208ENST00000479530 PABPC4LP0CB38 370 aaKnown RBP13.75□□□□□ -0.21
PDZRN3-208ENST00000479530 AOC1P19801 751 aa13.75□□□□□ -0.21
PDZRN3-208ENST00000479530 MXD4Q14582 209 aaPredicted RBP13.75□□□□□ -0.21
PDZRN3-208ENST00000479530 MAVSQ7Z434 540 aa13.75□□□□□ -0.21
PDZRN3-208ENST00000479530 RSPH3Q86UC2 560 aa13.75□□□□□ -0.21
PDZRN3-208ENST00000479530 UNC5BQ8IZJ1 945 aa13.75□□□□□ -0.21
PDZRN3-208ENST00000479530 MPP5Q8N3R9 675 aa13.75□□□□□ -0.21
PDZRN3-208ENST00000479530 ZNF513Q8N8E2 541 aaPredicted RBP13.75□□□□□ -0.21
PDZRN3-208ENST00000479530 LPIN3Q9BQK8 851 aa13.75□□□□□ -0.21
PDZRN3-208ENST00000479530 MAGEB5Q9BZ81 275 aa13.75□□□□□ -0.21
PDZRN3-208ENST00000479530 IFT122Q9HBG6 1241 aa13.75□□□□□ -0.21
PDZRN3-208ENST00000479530 RBPJLQ9UBG7 517 aa13.75□□□□□ -0.21
PDZRN3-208ENST00000479530 G3BP2Q9UN86 482 aaKnown RBP13.75□□□□□ -0.21
PDZRN3-208ENST00000479530 FKBP6O75344 327 aa13.75□□□□□ -0.21
PDZRN3-208ENST00000479530 STAG3L1P0CL83 205 aa13.75□□□□□ -0.21
PDZRN3-208ENST00000479530 UQCRBP14927 111 aa13.75□□□□□ -0.21
PDZRN3-208ENST00000479530 CD1EP15812 388 aa13.75□□□□□ -0.21
PDZRN3-208ENST00000479530 GMPRP36959 345 aa13.75□□□□□ -0.21
PDZRN3-208ENST00000479530 AP3M2P53677 418 aa13.75□□□□□ -0.21
PDZRN3-208ENST00000479530 YWHAEP62258 255 aaKnown RBP13.75□□□□□ -0.21
PDZRN3-208ENST00000479530 STX3Q13277 289 aa13.75□□□□□ -0.21
PDZRN3-208ENST00000479530 TTLL12Q14166 644 aaPredicted RBP13.75□□□□□ -0.21
PDZRN3-208ENST00000479530 SMAD1Q15797 465 aaKnown RBP13.75□□□□□ -0.21
PDZRN3-208ENST00000479530 RABGAP1LQ5R372 815 aa13.75□□□□□ -0.21
PDZRN3-208ENST00000479530 VWA5B1Q5TIE3 1220 aa13.75□□□□□ -0.21
PDZRN3-208ENST00000479530 PPP1R2P3Q6NXS1 205 aa13.75□□□□□ -0.21
PDZRN3-208ENST00000479530 SPATA24Q86W54 205 aa13.75□□□□□ -0.21
PDZRN3-208ENST00000479530 HPS6Q86YV9 775 aa13.75□□□□□ -0.21
PDZRN3-208ENST00000479530 ANKRD36BP1Q96IX9 119 aa13.75□□□□□ -0.21
PDZRN3-208ENST00000479530 DNAJC1Q96KC8 554 aaKnown RBP13.75□□□□□ -0.21
PDZRN3-208ENST00000479530 ZNF518BQ9C0D4 1074 aa13.75□□□□□ -0.21
PDZRN3-208ENST00000479530 VCX3BQ9H321 246 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms