RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 RAD51Q06609 339 aa14.74□□□□□ -0.05
COL20A1-206ENST00000479501 MPP3Q13368 585 aa14.74□□□□□ -0.05
COL20A1-206ENST00000479501 ACCSLQ4AC99 568 aa14.74□□□□□ -0.05
COL20A1-206ENST00000479501 PTPN20Q4JDL3 420 aa14.74□□□□□ -0.05
COL20A1-206ENST00000479501 EFHBQ8N7U6 833 aa14.74□□□□□ -0.05
COL20A1-206ENST00000479501 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.74□□□□□ -0.05
COL20A1-206ENST00000479501 HSFY1Q96LI6 401 aa14.74□□□□□ -0.05
COL20A1-206ENST00000479501 C12orf42Q96LP6 360 aa14.74□□□□□ -0.05
COL20A1-206ENST00000479501 CAMKK2Q96RR4 588 aa14.74□□□□□ -0.05
COL20A1-206ENST00000479501 GAD1Q99259 594 aa14.74□□□□□ -0.05
COL20A1-206ENST00000479501 CCT7Q99832 543 aa14.74□□□□□ -0.05
COL20A1-206ENST00000479501 ZNF229Q9UJW7 825 aa14.74□□□□□ -0.05
COL20A1-206ENST00000479501 RNF103O00237 685 aa14.74□□□□□ -0.05
COL20A1-206ENST00000479501 CHRNB2P17787 502 aa14.74□□□□□ -0.05
COL20A1-206ENST00000479501 SERPINB8P50452 374 aa14.74□□□□□ -0.05
COL20A1-206ENST00000479501 DAB2P98082 770 aa14.74□□□□□ -0.05
COL20A1-206ENST00000479501 NFE2Q16621 373 aaPredicted RBP14.74□□□□□ -0.05
COL20A1-206ENST00000479501 FSCN1Q16658 493 aaKnown RBP14.74□□□□□ -0.05
COL20A1-206ENST00000479501 NPNTQ6UXI9 565 aa14.74□□□□□ -0.05
COL20A1-206ENST00000479501 EXOC3L1Q86VI1 746 aa14.74□□□□□ -0.05
COL20A1-206ENST00000479501 KIAA2013Q8IYS2 634 aa14.74□□□□□ -0.05
COL20A1-206ENST00000479501 CKAP2Q8WWK9 683 aa14.74□□□□□ -0.05
COL20A1-206ENST00000479501 R3HDM2Q9Y2K5 976 aaKnown RBP14.74□□□□□ -0.05
COL20A1-206ENST00000479501 NUP98P52948 1817 aa14.73□□□□□ -0.05
COL20A1-206ENST00000479501 ADRA1DP25100 572 aa14.73□□□□□ -0.05
COL20A1-206ENST00000479501 AQP5P55064 265 aa14.73□□□□□ -0.05
COL20A1-206ENST00000479501 FAM83EQ2M2I3 478 aa14.73□□□□□ -0.05
COL20A1-206ENST00000479501 KBTBD12Q3ZCT8 623 aa14.73□□□□□ -0.05
COL20A1-206ENST00000479501 C12orf29Q8N999 325 aa14.73□□□□□ -0.05
COL20A1-206ENST00000479501 PCSK9Q8NBP7 692 aaKnown RBP14.73□□□□□ -0.05
COL20A1-206ENST00000479501 JOSD2Q8TAC2 188 aa14.73□□□□□ -0.05
COL20A1-206ENST00000479501 LRRC39Q96DD0 335 aa14.73□□□□□ -0.05
COL20A1-206ENST00000479501 SENP8Q96LD8 212 aa14.73□□□□□ -0.05
COL20A1-206ENST00000479501 SNRNP25Q9BV90 132 aaKnown RBP14.73□□□□□ -0.05
COL20A1-206ENST00000479501 NEUROG2Q9H2A3 272 aa14.73□□□□□ -0.05
COL20A1-206ENST00000479501 PIH1D1Q9NWS0 290 aaKnown RBP14.73□□□□□ -0.05
COL20A1-206ENST00000479501 VANGL2Q9ULK5 521 aa14.73□□□□□ -0.05
COL20A1-206ENST00000479501 C15orf41Q9Y2V0 281 aa14.73□□□□□ -0.05
COL20A1-206ENST00000479501 HARS2P49590 506 aaKnown RBP14.73□□□□□ -0.05
COL20A1-206ENST00000479501 ATXN3P54252 364 aaPredicted RBP14.73□□□□□ -0.05
COL20A1-206ENST00000479501 HADHBP55084 474 aaKnown RBP14.73□□□□□ -0.05
COL20A1-206ENST00000479501 SHCBP1Q8NEM2 672 aa14.73□□□□□ -0.05
COL20A1-206ENST00000479501 CELF6Q96J87 481 aaKnown RBP14.73□□□□□ -0.05
COL20A1-206ENST00000479501 SH3GL2Q99962 352 aa14.73□□□□□ -0.05
COL20A1-206ENST00000479501 IARS2Q9NSE4 1012 aaKnown RBP14.73□□□□□ -0.05
COL20A1-206ENST00000479501 DDX28Q9NUL7 540 aaKnown RBP14.73□□□□□ -0.05
COL20A1-206ENST00000479501 ACTL7BQ9Y614 415 aa14.73□□□□□ -0.05
COL20A1-206ENST00000479501 E7ENQ6 273 aa14.73□□□□□ -0.05
COL20A1-206ENST00000479501 DSG1Q02413 1049 aa14.73□□□□□ -0.05
COL20A1-206ENST00000479501 MMRN1Q13201 1228 aa14.73□□□□□ -0.05
COL20A1-206ENST00000479501 PRAMEF19Q5SWL8 479 aa14.73□□□□□ -0.05
COL20A1-206ENST00000479501 MON1BQ7L1V2 547 aa14.73□□□□□ -0.05
COL20A1-206ENST00000479501 ZNF75CPQ92670 426 aaPredicted RBP14.73□□□□□ -0.05
COL20A1-206ENST00000479501 FBXO32Q969P5 355 aa14.73□□□□□ -0.05
COL20A1-206ENST00000479501 PBXIP1Q96AQ6 731 aa14.73□□□□□ -0.05
COL20A1-206ENST00000479501 APOPT1Q96IL0 206 aa14.73□□□□□ -0.05
COL20A1-206ENST00000479501 SRPK1Q96SB4 655 aaKnown RBP14.73□□□□□ -0.05
COL20A1-206ENST00000479501 PKD2L2Q9NZM6 624 aa14.73□□□□□ -0.05
COL20A1-206ENST00000479501 NDUFA13Q9P0J0 144 aa14.73□□□□□ -0.05
COL20A1-206ENST00000479501 MANSC4A6NHS7 340 aaPredicted RBP14.73□□□□□ -0.05
COL20A1-206ENST00000479501 AGPSO00116 658 aa14.73□□□□□ -0.05
COL20A1-206ENST00000479501 SNX3O60493 162 aa14.73□□□□□ -0.05
COL20A1-206ENST00000479501 ABHD2P08910 425 aa14.73□□□□□ -0.05
COL20A1-206ENST00000479501 RALBP11234 206 aa14.73□□□□□ -0.05
COL20A1-206ENST00000479501 NOS2P35228 1153 aa14.73□□□□□ -0.05
COL20A1-206ENST00000479501 HOXD13P35453 343 aa14.73□□□□□ -0.05
COL20A1-206ENST00000479501 IMPG1Q17R60 797 aa14.73□□□□□ -0.05
COL20A1-206ENST00000479501 TIGD7Q6NT04 549 aaPredicted RBP14.73□□□□□ -0.05
COL20A1-206ENST00000479501 EP400NLQ6ZTU2 488 aa14.73□□□□□ -0.05
COL20A1-206ENST00000479501 STKLD1Q8NE28 680 aa14.73□□□□□ -0.05
COL20A1-206ENST00000479501 TMA16Q96EY4 203 aaKnown RBP14.73□□□□□ -0.05
COL20A1-206ENST00000479501 COLEC11Q9BWP8 271 aa14.73□□□□□ -0.05
COL20A1-206ENST00000479501 TMEM120AQ9BXJ8 343 aa14.73□□□□□ -0.05
COL20A1-206ENST00000479501 ULBP1Q9BZM6 244 aa14.73□□□□□ -0.05
COL20A1-206ENST00000479501 SHCBP1LQ9BZQ2 653 aa14.73□□□□□ -0.05
COL20A1-206ENST00000479501 LHX5Q9H2C1 402 aa14.73□□□□□ -0.05
COL20A1-206ENST00000479501 PALMDQ9NP74 551 aa14.73□□□□□ -0.05
COL20A1-206ENST00000479501 HACD3Q9P035 362 aa14.73□□□□□ -0.05
COL20A1-206ENST00000479501 SLC30A1Q9Y6M5 507 aa14.73□□□□□ -0.05
COL20A1-206ENST00000479501 GRK2P25098 689 aa14.72□□□□□ -0.05
COL20A1-206ENST00000479501 NNMTP40261 264 aa14.72□□□□□ -0.05
COL20A1-206ENST00000479501 TRPC1P48995 793 aa14.72□□□□□ -0.05
COL20A1-206ENST00000479501 RPL10AP62906 217 aaKnown RBP14.72□□□□□ -0.05
COL20A1-206ENST00000479501 TSHZ1Q6ZSZ6 1077 aa14.72□□□□□ -0.05
COL20A1-206ENST00000479501 ZNF572Q7Z3I7 529 aaPredicted RBP14.72□□□□□ -0.05
COL20A1-206ENST00000479501 SMARCD1Q96GM5 515 aa14.72□□□□□ -0.05
COL20A1-206ENST00000479501 MRPL1Q9BYD6 325 aaKnown RBP14.72□□□□□ -0.05
COL20A1-206ENST00000479501 POPDC2Q9HBU9 364 aa14.72□□□□□ -0.05
COL20A1-206ENST00000479501 TRPC7Q9HCX4 862 aa14.72□□□□□ -0.05
COL20A1-206ENST00000479501 CDYLQ9Y232 598 aa14.72□□□□□ -0.05
COL20A1-206ENST00000479501 DNAJC16Q9Y2G8 782 aa14.72□□□□□ -0.05
COL20A1-206ENST00000479501 PKD1L3Q7Z443 1732 aa14.72□□□□□ -0.05
COL20A1-206ENST00000479501 HACD1B0YJ81 288 aa14.72□□□□□ -0.05
COL20A1-206ENST00000479501 XPO1O14980 1071 aaKnown RBP14.72□□□□□ -0.05
COL20A1-206ENST00000479501 CPA3P15088 417 aa14.72□□□□□ -0.05
COL20A1-206ENST00000479501 PTPN1P18031 435 aaKnown RBP14.72□□□□□ -0.05
COL20A1-206ENST00000479501 MGAT1P26572 445 aa14.72□□□□□ -0.05
COL20A1-206ENST00000479501 NOVP48745 357 aa14.72□□□□□ -0.05
COL20A1-206ENST00000479501 COPAP53621 1224 aa14.72□□□□□ -0.05
COL20A1-206ENST00000479501 SLC45A4Q5BKX6 768 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms